RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 TRIM34Q9BYJ4 488 aa14.15□□□□□ -0.14
CCDC57-216ENST00000582885 TCP11L1Q9NUJ3 509 aa14.15□□□□□ -0.14
CCDC57-216ENST00000582885 MYH6P13533 1939 aa14.14□□□□□ -0.15
CCDC57-216ENST00000582885 PRDM1O75626 825 aa14.14□□□□□ -0.15
CCDC57-216ENST00000582885 LIFRP42702 1097 aa14.14□□□□□ -0.15
CCDC57-216ENST00000582885 EVCP57679 992 aa14.14□□□□□ -0.15
CCDC57-216ENST00000582885 TOB2Q14106 344 aaPredicted RBP14.14□□□□□ -0.15
CCDC57-216ENST00000582885 BECN1Q14457 450 aa14.14□□□□□ -0.15
CCDC57-216ENST00000582885 Q6ZUG5 572 aa14.14□□□□□ -0.15
CCDC57-216ENST00000582885 IQCA1Q86XH1 822 aa14.14□□□□□ -0.15
CCDC57-216ENST00000582885 TMTC2Q8N394 836 aa14.14□□□□□ -0.15
CCDC57-216ENST00000582885 NKX2-3Q8TAU0 364 aa14.14□□□□□ -0.15
CCDC57-216ENST00000582885 IGDCC4Q8TDY8 1250 aa14.14□□□□□ -0.15
CCDC57-216ENST00000582885 DNAJC18Q9H819 358 aa14.14□□□□□ -0.15
CCDC57-216ENST00000582885 ANGEL1Q9UNK9 670 aaKnown RBP14.14□□□□□ -0.15
CCDC57-216ENST00000582885 TSPY2A6NKD2 308 aa14.13□□□□□ -0.15
CCDC57-216ENST00000582885 CD2BP2O95400 341 aaKnown RBP14.13□□□□□ -0.15
CCDC57-216ENST00000582885 TFAP4Q01664 338 aa14.13□□□□□ -0.15
CCDC57-216ENST00000582885 SUPT20HL1Q3ZLR7 823 aa14.13□□□□□ -0.15
CCDC57-216ENST00000582885 HSCBQ8IWL3 235 aa14.13□□□□□ -0.15
CCDC57-216ENST00000582885 SULF1Q8IWU6 871 aa14.13□□□□□ -0.15
CCDC57-216ENST00000582885 ANKS1AQ92625 1134 aa14.13□□□□□ -0.15
CCDC57-216ENST00000582885 ZSCAN31Q96LW9 406 aaPredicted RBP14.13□□□□□ -0.15
CCDC57-216ENST00000582885 TCEANC2Q96MN5 208 aa14.13□□□□□ -0.15
CCDC57-216ENST00000582885 ZSCAN10Q96SZ4 725 aaPredicted RBP14.13□□□□□ -0.15
CCDC57-216ENST00000582885 UBAC1Q9BSL1 405 aa14.13□□□□□ -0.15
CCDC57-216ENST00000582885 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.13□□□□□ -0.15
CCDC57-216ENST00000582885 LIMCH1Q9UPQ0 1083 aa14.13□□□□□ -0.15
CCDC57-216ENST00000582885 OTOFQ9HC10 1997 aa14.13□□□□□ -0.15
CCDC57-216ENST00000582885 ERICH2A1L162 156 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 SH2B2O14492 632 aaPredicted RBP14.12□□□□□ -0.15
CCDC57-216ENST00000582885 IFIT3O14879 490 aaKnown RBP14.12□□□□□ -0.15
CCDC57-216ENST00000582885 TSPY3P0CV98 308 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 TSPY8P0CW00 308 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 NOVP48745 357 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 FGD1P98174 961 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 SEC23AQ15436 765 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 CERKLQ49MI3 558 aaPredicted RBP14.12□□□□□ -0.15
CCDC57-216ENST00000582885 TMEM67Q5HYA8 995 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 PPP4R3BQ5MIZ7 849 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 DCAF15Q66K64 600 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 CHST3Q7LGC8 479 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 SGMS1Q86VZ5 419 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 DGKHQ86XP1 1220 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 CDAN1Q8IWY9 1227 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 TBC1D2Q9BYX2 928 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 RRAGCQ9HB90 399 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 GINM1Q9NU53 330 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 PHIPQ8WWQ0 1821 aa14.12□□□□□ -0.15
CCDC57-216ENST00000582885 IGKV6D-41A0A0C4DH26 115 aa14.11□□□□□ -0.15
CCDC57-216ENST00000582885 K7ELQ4 463 aaPredicted RBP14.11□□□□□ -0.15
CCDC57-216ENST00000582885 WTAPQ15007 396 aa14.11□□□□□ -0.15
CCDC57-216ENST00000582885 FAM47AQ5JRC9 791 aa14.11□□□□□ -0.15
CCDC57-216ENST00000582885 NBPF12Q5TAG4 269 aaPredicted RBP14.11□□□□□ -0.15
CCDC57-216ENST00000582885 CDC37L1Q7L3B6 337 aa14.11□□□□□ -0.15
CCDC57-216ENST00000582885 BRF1Q92994 677 aa14.11□□□□□ -0.15
CCDC57-216ENST00000582885 ZNF274Q96GC6 653 aaPredicted RBP14.11□□□□□ -0.15
CCDC57-216ENST00000582885 LRRC2Q9BYS8 371 aa14.11□□□□□ -0.15
CCDC57-216ENST00000582885 LY9Q9HBG7 655 aa14.11□□□□□ -0.15
CCDC57-216ENST00000582885 SH2B1Q9NRF2 756 aaPredicted RBP14.11□□□□□ -0.15
CCDC57-216ENST00000582885 IL17RBQ9NRM6 502 aa14.11□□□□□ -0.15
CCDC57-216ENST00000582885 TNKSO95271 1327 aa14.11□□□□□ -0.15
CCDC57-216ENST00000582885 SSC5DA1L4H1 1573 aa14.1□□□□□ -0.15
CCDC57-216ENST00000582885 FAM196BA6NMK8 535 aa14.1□□□□□ -0.15
CCDC57-216ENST00000582885 AKR1B1P15121 316 aa14.1□□□□□ -0.15
CCDC57-216ENST00000582885 RCAN1P53805 252 aa14.1□□□□□ -0.15
CCDC57-216ENST00000582885 EAPPQ56P03 285 aaPredicted RBP14.1□□□□□ -0.15
CCDC57-216ENST00000582885 RCSD1Q6JBY9 416 aa14.1□□□□□ -0.15
CCDC57-216ENST00000582885 TMEM179Q6ZVK1 233 aa14.1□□□□□ -0.15
CCDC57-216ENST00000582885 KRT26Q7Z3Y9 468 aa14.1□□□□□ -0.15
CCDC57-216ENST00000582885 LDHDQ86WU2 507 aa14.1□□□□□ -0.15
CCDC57-216ENST00000582885 ENAHQ8N8S7 591 aaPredicted RBP14.1□□□□□ -0.15
CCDC57-216ENST00000582885 ZKSCAN3Q9BRR0 538 aa14.1□□□□□ -0.15
CCDC57-216ENST00000582885 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCDC57-216ENST00000582885 ZNF112Q9UJU3 913 aa14.1□□□□□ -0.15
CCDC57-216ENST00000582885 SCAF8Q9UPN6 1271 aaKnown RBP14.1□□□□□ -0.15
CCDC57-216ENST00000582885 PHF20L1A8MW92 1017 aa14.09□□□□□ -0.15
CCDC57-216ENST00000582885 ABCB5Q2M3G0 1257 aa14.09□□□□□ -0.15
CCDC57-216ENST00000582885 CHMP4CQ96CF2 233 aa14.09□□□□□ -0.15
CCDC57-216ENST00000582885 TMX3Q96JJ7 454 aa14.09□□□□□ -0.15
CCDC57-216ENST00000582885 IPO9Q96P70 1041 aaKnown RBP14.09□□□□□ -0.15
CCDC57-216ENST00000582885 ZNF341Q9BYN7 854 aa14.09□□□□□ -0.15
CCDC57-216ENST00000582885 MTMR4Q9NYA4 1195 aa14.09□□□□□ -0.15
CCDC57-216ENST00000582885 TPCN1Q9ULQ1 816 aa14.09□□□□□ -0.15
CCDC57-216ENST00000582885 NID2Q14112 1375 aa14.09□□□□□ -0.15
CCDC57-216ENST00000582885 PTPRFP10586 1907 aa14.08□□□□□ -0.16
CCDC57-216ENST00000582885 ADM5C9JUS6 153 aa14.08□□□□□ -0.16
CCDC57-216ENST00000582885 CTNND1O60716 968 aaKnown RBP14.08□□□□□ -0.16
CCDC57-216ENST00000582885 SLURP2P0DP57 97 aa14.08□□□□□ -0.16
CCDC57-216ENST00000582885 CAP2P40123 477 aa14.08□□□□□ -0.16
CCDC57-216ENST00000582885 APOBRQ0VD83 1088 aa14.08□□□□□ -0.16
CCDC57-216ENST00000582885 IFIT1BQ5T764 474 aaKnown RBP14.08□□□□□ -0.16
CCDC57-216ENST00000582885 MIGA2Q7L4E1 593 aa14.08□□□□□ -0.16
CCDC57-216ENST00000582885 USP48Q86UV5 1035 aa14.08□□□□□ -0.16
CCDC57-216ENST00000582885 KANSL2Q9H9L4 492 aa14.08□□□□□ -0.16
CCDC57-216ENST00000582885 CABP5Q9NP86 173 aa14.08□□□□□ -0.16
CCDC57-216ENST00000582885 NMRK2Q9NPI5 230 aa14.08□□□□□ -0.16
CCDC57-216ENST00000582885 GPHNQ9NQX3 736 aaPredicted RBP14.08□□□□□ -0.16
CCDC57-216ENST00000582885 SYNPO2Q9UMS6 1093 aa14.08□□□□□ -0.16
CCDC57-216ENST00000582885 CLEC11AQ9Y240 323 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms