RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 DCP1AQ9NPI6 582 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-220ENST00000581737 PI4KBQ9UBF8 816 aa16.08■□□□□ 0.16
CSNK1D-220ENST00000581737 CCDC171Q6TFL3 1326 aa16.08■□□□□ 0.16
CSNK1D-220ENST00000581737 LAMB1P07942 1786 aa16.08■□□□□ 0.16
CSNK1D-220ENST00000581737 REC8O95072 547 aa16.07■□□□□ 0.16
CSNK1D-220ENST00000581737 IREB2P48200 963 aaKnown RBP16.07■□□□□ 0.16
CSNK1D-220ENST00000581737 CWC27Q6UX04 472 aaKnown RBP16.07■□□□□ 0.16
CSNK1D-220ENST00000581737 TTC6Q86TZ1 520 aa16.07■□□□□ 0.16
CSNK1D-220ENST00000581737 ZFPM1Q8IX07 1006 aa16.07■□□□□ 0.16
CSNK1D-220ENST00000581737 FAM43AQ8N2R8 423 aa16.07■□□□□ 0.16
CSNK1D-220ENST00000581737 TRIM34Q9BYJ4 488 aa16.07■□□□□ 0.16
CSNK1D-220ENST00000581737 MCM9Q9NXL9 1143 aa16.07■□□□□ 0.16
CSNK1D-220ENST00000581737 TAOK2Q9UL54 1235 aa16.07■□□□□ 0.16
CSNK1D-220ENST00000581737 DDTLA6NHG4 134 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 UNCXA6NJT0 531 aa16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 PATL2C9JE40 543 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 H0YGN5 161 aa16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 PRKAB2O43741 272 aa16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 APPP05067 770 aa16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 POLR3DP05423 398 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 CHMLP26374 656 aa16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 SH3BP5LQ7L8J4 393 aa16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 OTUD5Q96G74 571 aa16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 ZNF341Q9BYN7 854 aa16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 C22orf23Q9BZE7 217 aa16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 ARPP21Q9UBL0 812 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 SAP30BPQ9UHR5 308 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 HERC5Q9UII4 1024 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-220ENST00000581737 TBC1D12O60347 775 aa16.05■□□□□ 0.16
CSNK1D-220ENST00000581737 TDO2P48775 406 aa16.05■□□□□ 0.16
CSNK1D-220ENST00000581737 OTUD7BQ6GQQ9 843 aa16.05■□□□□ 0.16
CSNK1D-220ENST00000581737 CRACR2BQ8N4Y2 399 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-220ENST00000581737 SH3TC2Q8TF17 1288 aa16.05■□□□□ 0.16
CSNK1D-220ENST00000581737 TMEM106CQ9BVX2 250 aa16.05■□□□□ 0.16
CSNK1D-220ENST00000581737 EHD4Q9H223 541 aa16.05■□□□□ 0.16
CSNK1D-220ENST00000581737 PALD1Q9ULE6 856 aa16.05■□□□□ 0.16
CSNK1D-220ENST00000581737 SIPA1L1O43166 1804 aa16.04■□□□□ 0.16
CSNK1D-220ENST00000581737 GSG1L2A8MUP6 293 aa16.04■□□□□ 0.16
CSNK1D-220ENST00000581737 VGLL4Q14135 290 aa16.04■□□□□ 0.16
CSNK1D-220ENST00000581737 SLC9C1Q4G0N8 1177 aa16.04■□□□□ 0.16
CSNK1D-220ENST00000581737 CCDC129Q6ZRS4 1044 aa16.04■□□□□ 0.16
CSNK1D-220ENST00000581737 FOXP4Q8IVH2 680 aaPredicted RBP16.04■□□□□ 0.16
CSNK1D-220ENST00000581737 NAPBQ9H115 298 aa16.04■□□□□ 0.16
CSNK1D-220ENST00000581737 OTOFQ9HC10 1997 aa16.04■□□□□ 0.16
CSNK1D-220ENST00000581737 KIAA0100Q14667 2235 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-220ENST00000581737 LAMA3Q16787 3333 aa16.03■□□□□ 0.16
CSNK1D-220ENST00000581737 ZMYM6O95789 1325 aa16.03■□□□□ 0.16
CSNK1D-220ENST00000581737 CCL15-CCL14A0A0B4J2E2 113 aa16.03■□□□□ 0.16
CSNK1D-220ENST00000581737 MAP3K10Q02779 954 aa16.03■□□□□ 0.16
CSNK1D-220ENST00000581737 TAF1CQ15572 869 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-220ENST00000581737 CCL15Q16663 113 aa16.03■□□□□ 0.16
CSNK1D-220ENST00000581737 SBK1Q52WX2 424 aa16.03■□□□□ 0.16
CSNK1D-220ENST00000581737 ZNF589Q86UQ0 364 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-220ENST00000581737 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.03■□□□□ 0.167e-6■□□□□ 9.9
CSNK1D-220ENST00000581737 SERPINB13Q9UIV8 391 aa16.03■□□□□ 0.16
CSNK1D-220ENST00000581737 MYH8P13535 1937 aa16.03■□□□□ 0.16
CSNK1D-220ENST00000581737 ZSWIM8A7E2V4 1837 aa16.03■□□□□ 0.16
CSNK1D-220ENST00000581737 USP17L12C9JPN9 530 aa16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 USP17L21D6R901 530 aa16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 EPB41L2O43491 1005 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 ECM2O94769 699 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 MCCP23508 829 aa16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 CTGFP29279 349 aa16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 ALX1Q15699 326 aa16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 SLC4A8Q2Y0W8 1093 aa16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 MIGA2Q7L4E1 593 aa16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 METTL16Q86W50 562 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 IFNL3Q8IZI9 196 aa16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 IL27Q8NEV9 243 aa16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 WRNIP1Q96S55 665 aa16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 EPB41L4AQ9HCS5 686 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 CSADQ9Y600 493 aa16.02■□□□□ 0.16
CSNK1D-220ENST00000581737 SGSM2O43147 1006 aa16.01■□□□□ 0.15
CSNK1D-220ENST00000581737 SLC3A2P08195 630 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-220ENST00000581737 HSPD1P10809 573 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-220ENST00000581737 RBM25P49756 843 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-220ENST00000581737 MAP3K9P80192 1104 aa16.01■□□□□ 0.15
CSNK1D-220ENST00000581737 C12orf60Q5U649 245 aa16.01■□□□□ 0.15
CSNK1D-220ENST00000581737 SHISA4Q96DD7 197 aa16.01■□□□□ 0.15
CSNK1D-220ENST00000581737 DSCC1Q9BVC3 393 aa16.01■□□□□ 0.15
CSNK1D-220ENST00000581737 ZFYVE28Q9HCC9 887 aa16.01■□□□□ 0.15
CSNK1D-220ENST00000581737 SWAP70Q9UH65 585 aa16.01■□□□□ 0.15
CSNK1D-220ENST00000581737 ZNF112Q9UJU3 913 aa16.01■□□□□ 0.15
CSNK1D-220ENST00000581737 DOCK1Q14185 1865 aa16.01■□□□□ 0.15
CSNK1D-220ENST00000581737 ROBO3Q96MS0 1386 aa16■□□□□ 0.15
CSNK1D-220ENST00000581737 COL6A3P12111 3177 aa16■□□□□ 0.15
CSNK1D-220ENST00000581737 MTFR1Q15390 333 aa16■□□□□ 0.15
CSNK1D-220ENST00000581737 VPS53Q5VIR6 699 aa16■□□□□ 0.15
CSNK1D-220ENST00000581737 CTR9Q6PD62 1173 aa16■□□□□ 0.15
CSNK1D-220ENST00000581737 CHRDL2Q6WN34 429 aa16■□□□□ 0.15
CSNK1D-220ENST00000581737 KIAA1211Q6ZU35 1233 aa16■□□□□ 0.15
CSNK1D-220ENST00000581737 ESYT1Q9BSJ8 1104 aa16■□□□□ 0.15
CSNK1D-220ENST00000581737 ZNF287Q9HBT7 754 aa16■□□□□ 0.15
CSNK1D-220ENST00000581737 LAMA4Q16363 1823 aa16■□□□□ 0.15
CSNK1D-220ENST00000581737 ATAD5Q96QE3 1844 aa15.99■□□□□ 0.15
CSNK1D-220ENST00000581737 MINDY4BA8MYZ0 360 aa15.99■□□□□ 0.15
CSNK1D-220ENST00000581737 CTNND1O60716 968 aaKnown RBP15.99■□□□□ 0.15
CSNK1D-220ENST00000581737 SEC24BO95487 1268 aa15.99■□□□□ 0.15
CSNK1D-220ENST00000581737 CYP2D6P10635 497 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms