RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 GUCY1B3Q02153 619 aa23.59■■□□□ 1.37
SMG8-203ENST00000578922 CDC42EP5Q6NZY7 148 aa23.59■■□□□ 1.37
SMG8-203ENST00000578922 SGIP1Q9BQI5 828 aa23.59■■□□□ 1.37
SMG8-203ENST00000578922 DDX4Q9NQI0 724 aaKnown RBP23.59■■□□□ 1.37
SMG8-203ENST00000578922 IFIT1BQ5T764 474 aaKnown RBP23.58■■□□□ 1.37
SMG8-203ENST00000578922 FAM173BQ6P4H8 233 aa23.58■■□□□ 1.37
SMG8-203ENST00000578922 ORC3Q9UBD5 711 aaPredicted RBP23.58■■□□□ 1.37
SMG8-203ENST00000578922 CNPY2Q9Y2B0 182 aa23.58■■□□□ 1.37
SMG8-203ENST00000578922 WDHD1O75717 1129 aaPredicted RBP23.58■■□□□ 1.36
SMG8-203ENST00000578922 ZNF654Q8IZM8 581 aa23.58■■□□□ 1.36
SMG8-203ENST00000578922 PHKBQ93100 1093 aa23.58■■□□□ 1.36
SMG8-203ENST00000578922 MTA3Q9BTC8 594 aa23.58■■□□□ 1.36
SMG8-203ENST00000578922 FAM217BQ9NTX9 383 aaPredicted RBP23.58■■□□□ 1.36
SMG8-203ENST00000578922 TPM2P07951 284 aa23.57■■□□□ 1.36
SMG8-203ENST00000578922 CACNB3P54284 484 aa23.57■■□□□ 1.36
SMG8-203ENST00000578922 TFAP4Q01664 338 aa23.57■■□□□ 1.36
SMG8-203ENST00000578922 TMTC2Q8N394 836 aa23.57■■□□□ 1.36
SMG8-203ENST00000578922 COL4A5P29400 1685 aa23.57■■□□□ 1.36
SMG8-203ENST00000578922 FKBP1AP62942 108 aaKnown RBP23.57■■□□□ 1.36
SMG8-203ENST00000578922 KIF3AQ9Y496 699 aa23.57■■□□□ 1.36
SMG8-203ENST00000578922 OFD1O75665 1012 aa23.56■■□□□ 1.36
SMG8-203ENST00000578922 PTGER2P43116 358 aa23.56■■□□□ 1.36
SMG8-203ENST00000578922 DNM1Q05193 864 aaKnown RBP23.56■■□□□ 1.36
SMG8-203ENST00000578922 TSPY26PQ9H489 355 aa23.56■■□□□ 1.36
SMG8-203ENST00000578922 BCS1LQ9Y276 419 aa23.56■■□□□ 1.36
SMG8-203ENST00000578922 ATP6V1DQ9Y5K8 247 aa23.56■■□□□ 1.36
SMG8-203ENST00000578922 ROBO3Q96MS0 1386 aa23.56■■□□□ 1.36
SMG8-203ENST00000578922 NFIAQ12857 509 aa23.55■■□□□ 1.36
SMG8-203ENST00000578922 SOGA3Q5TF21 947 aa23.55■■□□□ 1.36
SMG8-203ENST00000578922 OTUD7BQ6GQQ9 843 aa23.55■■□□□ 1.36
SMG8-203ENST00000578922 CMTR1Q8N1G2 835 aaKnown RBP23.55■■□□□ 1.36
SMG8-203ENST00000578922 CCDC82Q8N4S0 544 aa23.55■■□□□ 1.36
SMG8-203ENST00000578922 ZDHHC15Q96MV8 337 aa23.55■■□□□ 1.36
SMG8-203ENST00000578922 ZNF646O15015 1829 aaPredicted RBP23.55■■□□□ 1.36
SMG8-203ENST00000578922 MYH1P12882 1939 aa23.55■■□□□ 1.36
SMG8-203ENST00000578922 UTRNP46939 3433 aa23.55■■□□□ 1.36
SMG8-203ENST00000578922 TCHHQ07283 1943 aa23.55■■□□□ 1.36
SMG8-203ENST00000578922 ZNF500O60304 480 aaPredicted RBP23.55■■□□□ 1.36
SMG8-203ENST00000578922 RTN1Q16799 776 aa23.55■■□□□ 1.36
SMG8-203ENST00000578922 TPRNQ4KMQ1 711 aa23.55■■□□□ 1.36
SMG8-203ENST00000578922 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.55■■□□□ 1.36
SMG8-203ENST00000578922 GJB4Q9NTQ9 266 aa23.55■■□□□ 1.36
SMG8-203ENST00000578922 PDIA4P13667 645 aaKnown RBP23.54■■□□□ 1.36
SMG8-203ENST00000578922 CPLX2Q6PUV4 134 aaKnown RBP23.54■■□□□ 1.36
SMG8-203ENST00000578922 ZNF444Q8N0Y2 327 aaPredicted RBP23.54■■□□□ 1.36
SMG8-203ENST00000578922 PSMD14O00487 310 aa23.54■■□□□ 1.36
SMG8-203ENST00000578922 CDK8P49336 464 aa23.54■■□□□ 1.36
SMG8-203ENST00000578922 TERF1P54274 439 aa23.54■■□□□ 1.36
SMG8-203ENST00000578922 USP48Q86UV5 1035 aa23.54■■□□□ 1.36
SMG8-203ENST00000578922 AIFM3Q96NN9 605 aa23.54■■□□□ 1.36
SMG8-203ENST00000578922 CCDC39Q9UFE4 941 aa23.54■■□□□ 1.36
SMG8-203ENST00000578922 ZBTB12Q9Y330 459 aaPredicted RBP23.54■■□□□ 1.36
SMG8-203ENST00000578922 DDX60LQ5H9U9 1706 aaKnown RBP23.53■■□□□ 1.36
SMG8-203ENST00000578922 UBE2Q2LH0YL09 131 aa23.53■■□□□ 1.36
SMG8-203ENST00000578922 FIBPO43427 364 aa23.53■■□□□ 1.36
SMG8-203ENST00000578922 CDKL5O76039 1030 aa23.53■■□□□ 1.36
SMG8-203ENST00000578922 TSPY3P0CV98 308 aa23.53■■□□□ 1.36
SMG8-203ENST00000578922 TSPY8P0CW00 308 aa23.53■■□□□ 1.36
SMG8-203ENST00000578922 IARSP41252 1262 aaKnown RBP23.53■■□□□ 1.36
SMG8-203ENST00000578922 NTRK3Q16288 839 aa23.53■■□□□ 1.36
SMG8-203ENST00000578922 CATIPQ7Z7H3 387 aa23.53■■□□□ 1.36
SMG8-203ENST00000578922 LETM1O95202 739 aaPredicted RBP23.52■■□□□ 1.36
SMG8-203ENST00000578922 RASA1P20936 1047 aa23.52■■□□□ 1.36
SMG8-203ENST00000578922 C16orf86Q6ZW13 317 aa23.52■■□□□ 1.36
SMG8-203ENST00000578922 NIM1KQ8IY84 436 aa23.52■■□□□ 1.36
SMG8-203ENST00000578922 FANCBQ8NB91 859 aa23.52■■□□□ 1.36
SMG8-203ENST00000578922 SLC26A6Q9BXS9 759 aa23.52■■□□□ 1.36
SMG8-203ENST00000578922 CD2APQ9Y5K6 639 aa23.52■■□□□ 1.36
SMG8-203ENST00000578922 FOCADQ5VW36 1801 aa23.52■■□□□ 1.36
SMG8-203ENST00000578922 TCP10Q12799 353 aa23.52■■□□□ 1.36
SMG8-203ENST00000578922 ZFPM1Q8IX07 1006 aa23.52■■□□□ 1.36
SMG8-203ENST00000578922 TAOK3Q9H2K8 898 aa23.52■■□□□ 1.36
SMG8-203ENST00000578922 IL17RBQ9NRM6 502 aa23.52■■□□□ 1.36
SMG8-203ENST00000578922 RSBN1LQ6PCB5 846 aaPredicted RBP23.51■■□□□ 1.35
SMG8-203ENST00000578922 NLGN2Q8NFZ4 835 aa23.51■■□□□ 1.35
SMG8-203ENST00000578922 C8orf76Q96K31 380 aa23.51■■□□□ 1.35
SMG8-203ENST00000578922 OSBPL5Q9H0X9 879 aaPredicted RBP23.51■■□□□ 1.35
SMG8-203ENST00000578922 SERPINA10Q9UK55 444 aa23.51■■□□□ 1.35
SMG8-203ENST00000578922 HDLBPQ00341 1268 aaKnown RBP23.51■■□□□ 1.35
SMG8-203ENST00000578922 RESTQ13127 1097 aa23.51■■□□□ 1.35
SMG8-203ENST00000578922 CFAP100Q494V2 611 aa23.51■■□□□ 1.35
SMG8-203ENST00000578922 UVSSAQ2YD98 709 aa23.5■■□□□ 1.35
SMG8-203ENST00000578922 RCSD1Q6JBY9 416 aa23.5■■□□□ 1.35
SMG8-203ENST00000578922 MRIQ9BWK5 157 aa23.5■■□□□ 1.35
SMG8-203ENST00000578922 ZNF287Q9HBT7 754 aa23.5■■□□□ 1.35
SMG8-203ENST00000578922 ZKSCAN5Q9Y2L8 839 aa23.5■■□□□ 1.35
SMG8-203ENST00000578922 SLURP2P0DP57 97 aa23.5■■□□□ 1.35
SMG8-203ENST00000578922 CSPP1Q1MSJ5 1256 aa23.5■■□□□ 1.35
SMG8-203ENST00000578922 TTC6Q86TZ1 520 aa23.5■■□□□ 1.35
SMG8-203ENST00000578922 ALG1Q9BT22 464 aa23.5■■□□□ 1.35
SMG8-203ENST00000578922 TDRD3Q9H7E2 651 aaKnown RBP23.5■■□□□ 1.35
SMG8-203ENST00000578922 ZNRF3Q9ULT6 936 aa23.5■■□□□ 1.35
SMG8-203ENST00000578922 BRCA1P38398 1863 aaKnown RBP23.49■■□□□ 1.35
SMG8-203ENST00000578922 NFKBIEO00221 500 aa23.49■■□□□ 1.35
SMG8-203ENST00000578922 GADD45BO75293 160 aaPredicted RBP23.49■■□□□ 1.35
SMG8-203ENST00000578922 SSRP1Q08945 709 aaKnown RBP23.49■■□□□ 1.35
SMG8-203ENST00000578922 TFIP11Q9UBB9 837 aaKnown RBP23.49■■□□□ 1.35
SMG8-203ENST00000578922 NID2Q14112 1375 aa23.49■■□□□ 1.35
SMG8-203ENST00000578922 VIL1P09327 827 aaKnown RBP23.48■■□□□ 1.35
SMG8-203ENST00000578922 UBE2HP62256 183 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms