RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 TFAP4Q01664 338 aa19.94■□□□□ 0.78
CDK5RAP3-207ENST00000578134 SLC4A8Q2Y0W8 1093 aa19.94■□□□□ 0.78
CDK5RAP3-207ENST00000578134 SUPT20HL1Q3ZLR7 823 aa19.94■□□□□ 0.78
CDK5RAP3-207ENST00000578134 NEDD1Q8NHV4 660 aa19.94■□□□□ 0.78
CDK5RAP3-207ENST00000578134 IGDCC4Q8TDY8 1250 aa19.94■□□□□ 0.78
CDK5RAP3-207ENST00000578134 IPO9Q96P70 1041 aaKnown RBP19.94■□□□□ 0.78
CDK5RAP3-207ENST00000578134 TBC1D2Q9BYX2 928 aa19.94■□□□□ 0.78
CDK5RAP3-207ENST00000578134 SH2B1Q9NRF2 756 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-207ENST00000578134 GGA3Q9NZ52 723 aa19.94■□□□□ 0.78
CDK5RAP3-207ENST00000578134 POTECB2RU33 542 aa19.93■□□□□ 0.78
CDK5RAP3-207ENST00000578134 PRDM1O75626 825 aa19.93■□□□□ 0.78
CDK5RAP3-207ENST00000578134 EVX2Q03828 476 aa19.93■□□□□ 0.78
CDK5RAP3-207ENST00000578134 DCAF15Q66K64 600 aa19.93■□□□□ 0.78
CDK5RAP3-207ENST00000578134 DGKHQ86XP1 1220 aa19.93■□□□□ 0.78
CDK5RAP3-207ENST00000578134 SULF1Q8IWU6 871 aa19.93■□□□□ 0.78
CDK5RAP3-207ENST00000578134 TEPSINQ96N21 525 aa19.93■□□□□ 0.78
CDK5RAP3-207ENST00000578134 ZSCAN10Q96SZ4 725 aaPredicted RBP19.93■□□□□ 0.78
CDK5RAP3-207ENST00000578134 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.93■□□□□ 0.78
CDK5RAP3-207ENST00000578134 SH2B2O14492 632 aaPredicted RBP19.92■□□□□ 0.78
CDK5RAP3-207ENST00000578134 SHMT1P34896 483 aa19.92■□□□□ 0.78
CDK5RAP3-207ENST00000578134 TOB2Q14106 344 aaPredicted RBP19.92■□□□□ 0.78
CDK5RAP3-207ENST00000578134 CERKLQ49MI3 558 aaPredicted RBP19.92■□□□□ 0.78
CDK5RAP3-207ENST00000578134 TMEM67Q5HYA8 995 aa19.92■□□□□ 0.78
CDK5RAP3-207ENST00000578134 SGMS1Q86VZ5 419 aa19.92■□□□□ 0.78
CDK5RAP3-207ENST00000578134 ANKS1AQ92625 1134 aa19.92■□□□□ 0.78
CDK5RAP3-207ENST00000578134 ZNF274Q96GC6 653 aaPredicted RBP19.92■□□□□ 0.78
CDK5RAP3-207ENST00000578134 GINM1Q9NU53 330 aa19.92■□□□□ 0.78
CDK5RAP3-207ENST00000578134 WTAPQ15007 396 aa19.91■□□□□ 0.78
CDK5RAP3-207ENST00000578134 CHST3Q7LGC8 479 aa19.91■□□□□ 0.78
CDK5RAP3-207ENST00000578134 SLC44A5Q8NCS7 719 aa19.91■□□□□ 0.78
CDK5RAP3-207ENST00000578134 BRF1Q92994 677 aa19.91■□□□□ 0.78
CDK5RAP3-207ENST00000578134 ASTN2O75129 1339 aaPredicted RBP19.91■□□□□ 0.78
CDK5RAP3-207ENST00000578134 UTRNP46939 3433 aa19.9■□□□□ 0.78
CDK5RAP3-207ENST00000578134 CD2BP2O95400 341 aaKnown RBP19.9■□□□□ 0.78
CDK5RAP3-207ENST00000578134 RCAN1P53805 252 aa19.9■□□□□ 0.78
CDK5RAP3-207ENST00000578134 FAM47AQ5JRC9 791 aa19.9■□□□□ 0.78
CDK5RAP3-207ENST00000578134 SYNE3Q6ZMZ3 975 aa19.9■□□□□ 0.78
CDK5RAP3-207ENST00000578134 TCEANC2Q96MN5 208 aa19.9■□□□□ 0.78
CDK5RAP3-207ENST00000578134 CABP5Q9NP86 173 aa19.9■□□□□ 0.78
CDK5RAP3-207ENST00000578134 PLIN4Q96Q06 1357 aa19.9■□□□□ 0.78
CDK5RAP3-207ENST00000578134 CCDC69A6NI79 296 aa19.89■□□□□ 0.77
CDK5RAP3-207ENST00000578134 TNKSO95271 1327 aa19.89■□□□□ 0.77
CDK5RAP3-207ENST00000578134 COL9A3Q14050 684 aaPredicted RBP19.89■□□□□ 0.77
CDK5RAP3-207ENST00000578134 SEC23AQ15436 765 aa19.89■□□□□ 0.77
CDK5RAP3-207ENST00000578134 CDC37L1Q7L3B6 337 aa19.89■□□□□ 0.77
CDK5RAP3-207ENST00000578134 TMX3Q96JJ7 454 aa19.89■□□□□ 0.77
CDK5RAP3-207ENST00000578134 LRRC2Q9BYS8 371 aa19.89■□□□□ 0.77
CDK5RAP3-207ENST00000578134 DNAJC18Q9H819 358 aa19.89■□□□□ 0.77
CDK5RAP3-207ENST00000578134 RRAGCQ9HB90 399 aa19.89■□□□□ 0.77
CDK5RAP3-207ENST00000578134 LY9Q9HBG7 655 aa19.89■□□□□ 0.77
CDK5RAP3-207ENST00000578134 NOVP48745 357 aa19.88■□□□□ 0.77
CDK5RAP3-207ENST00000578134 PPP2R5BQ15173 497 aa19.88■□□□□ 0.77
CDK5RAP3-207ENST00000578134 EAPPQ56P03 285 aaPredicted RBP19.88■□□□□ 0.77
CDK5RAP3-207ENST00000578134 IFIT1BQ5T764 474 aaKnown RBP19.88■□□□□ 0.77
CDK5RAP3-207ENST00000578134 TMEM179Q6ZVK1 233 aa19.88■□□□□ 0.77
CDK5RAP3-207ENST00000578134 KRT26Q7Z3Y9 468 aa19.88■□□□□ 0.77
CDK5RAP3-207ENST00000578134 KANSL2Q9H9L4 492 aa19.88■□□□□ 0.77
CDK5RAP3-207ENST00000578134 ABCB5Q2M3G0 1257 aa19.87■□□□□ 0.77
CDK5RAP3-207ENST00000578134 NBPF12Q5TAG4 269 aaPredicted RBP19.87■□□□□ 0.77
CDK5RAP3-207ENST00000578134 NFXL1Q6ZNB6 911 aa19.87■□□□□ 0.77
CDK5RAP3-207ENST00000578134 ENAHQ8N8S7 591 aaPredicted RBP19.87■□□□□ 0.77
CDK5RAP3-207ENST00000578134 NKX2-3Q8TAU0 364 aa19.87■□□□□ 0.77
CDK5RAP3-207ENST00000578134 INTS4Q96HW7 963 aaKnown RBP19.87■□□□□ 0.77
CDK5RAP3-207ENST00000578134 ZKSCAN3Q9BRR0 538 aa19.87■□□□□ 0.77
CDK5RAP3-207ENST00000578134 ZNF341Q9BYN7 854 aa19.87■□□□□ 0.77
CDK5RAP3-207ENST00000578134 IL17RBQ9NRM6 502 aa19.87■□□□□ 0.77
CDK5RAP3-207ENST00000578134 TPCN1Q9ULQ1 816 aa19.87■□□□□ 0.77
CDK5RAP3-207ENST00000578134 SLC12A7Q9Y666 1083 aa19.87■□□□□ 0.77
CDK5RAP3-207ENST00000578134 IGKV6D-41A0A0C4DH26 115 aa19.86■□□□□ 0.77
CDK5RAP3-207ENST00000578134 DHX16O60231 1041 aaKnown RBP19.86■□□□□ 0.77
CDK5RAP3-207ENST00000578134 CALM1P0DP23 149 aa19.86■□□□□ 0.77
CDK5RAP3-207ENST00000578134 CALM2P0DP24 149 aa19.86■□□□□ 0.77
CDK5RAP3-207ENST00000578134 CALM3P0DP25 149 aa19.86■□□□□ 0.77
CDK5RAP3-207ENST00000578134 AKR1B1P15121 316 aa19.86■□□□□ 0.77
CDK5RAP3-207ENST00000578134 NF2P35240 595 aa19.86■□□□□ 0.77
CDK5RAP3-207ENST00000578134 APOBRQ0VD83 1088 aa19.86■□□□□ 0.77
CDK5RAP3-207ENST00000578134 CUL4AQ13619 759 aa19.86■□□□□ 0.77
CDK5RAP3-207ENST00000578134 SLKQ9H2G2 1235 aaPredicted RBP19.86■□□□□ 0.77
CDK5RAP3-207ENST00000578134 MTMR4Q9NYA4 1195 aa19.86■□□□□ 0.77
CDK5RAP3-207ENST00000578134 SYNPO2Q9UMS6 1093 aa19.86■□□□□ 0.77
CDK5RAP3-207ENST00000578134 CLEC11AQ9Y240 323 aa19.86■□□□□ 0.77
CDK5RAP3-207ENST00000578134 SIPA1L1O43166 1804 aa19.86■□□□□ 0.77
CDK5RAP3-207ENST00000578134 KLF18A0A0U1RQI7 1052 aa19.85■□□□□ 0.77
CDK5RAP3-207ENST00000578134 MPHOSPH10O00566 681 aaKnown RBP19.85■□□□□ 0.77
CDK5RAP3-207ENST00000578134 CTNND1O60716 968 aaKnown RBP19.85■□□□□ 0.77
CDK5RAP3-207ENST00000578134 PFKFB2O60825 505 aa19.85■□□□□ 0.77
CDK5RAP3-207ENST00000578134 PDIA3P30101 505 aaKnown RBP19.85■□□□□ 0.77
CDK5RAP3-207ENST00000578134 CAP2P40123 477 aa19.85■□□□□ 0.77
CDK5RAP3-207ENST00000578134 ME3Q16798 604 aa19.85■□□□□ 0.77
CDK5RAP3-207ENST00000578134 MIGA2Q7L4E1 593 aa19.85■□□□□ 0.77
CDK5RAP3-207ENST00000578134 CATIPQ7Z7H3 387 aa19.85■□□□□ 0.77
CDK5RAP3-207ENST00000578134 LDHDQ86WU2 507 aa19.85■□□□□ 0.77
CDK5RAP3-207ENST00000578134 MAP3K14Q99558 947 aa19.85■□□□□ 0.77
CDK5RAP3-207ENST00000578134 KAT14Q9H8E8 782 aa19.85■□□□□ 0.77
CDK5RAP3-207ENST00000578134 NYAP2Q9P242 653 aa19.85■□□□□ 0.77
CDK5RAP3-207ENST00000578134 ZNF112Q9UJU3 913 aa19.85■□□□□ 0.77
CDK5RAP3-207ENST00000578134 PHF20L1A8MW92 1017 aa19.84■□□□□ 0.77
CDK5RAP3-207ENST00000578134 PPP1R12BO60237 982 aaPredicted RBP19.84■□□□□ 0.77
CDK5RAP3-207ENST00000578134 DDAH1O94760 285 aa19.84■□□□□ 0.77
CDK5RAP3-207ENST00000578134 TTLL1O95922 423 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 702.3 ms