RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 KRT40Q6A162 431 aa9.56□□□□□ -0.88
SKA2-203ENST00000578105 GRAPLQ8TC17 118 aaPredicted RBP9.56□□□□□ -0.88
SKA2-203ENST00000578105 CCDC34Q96HJ3 373 aa9.56□□□□□ -0.88
SKA2-203ENST00000578105 MAP3K14Q99558 947 aa9.56□□□□□ -0.88
SKA2-203ENST00000578105 BPIFA3Q9BQP9 254 aa9.56□□□□□ -0.88
SKA2-203ENST00000578105 HOOK1Q9UJC3 728 aaKnown RBP9.56□□□□□ -0.88
SKA2-203ENST00000578105 GOLGA6L19H0YKK7 550 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 HRO43593 1189 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 GYG1P46976 350 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 ZNF165P49910 485 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 TPM4P67936 248 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 RBM6P78332 1123 aaKnown RBP9.55□□□□□ -0.88
SKA2-203ENST00000578105 PDE4BQ07343 736 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 SNW1Q13573 536 aaKnown RBP9.55□□□□□ -0.88
SKA2-203ENST00000578105 ZRSR1Q15695 479 aaKnown RBP9.55□□□□□ -0.88
SKA2-203ENST00000578105 SLF2Q8IX21 1173 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 AMOTL1Q8IY63 956 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 CEP57L1Q8IYX8 460 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 FMR1NBQ8N0W7 255 aaPredicted RBP9.55□□□□□ -0.88
SKA2-203ENST00000578105 FSIP1Q8NA03 581 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 CELF1Q92879 486 aaKnown RBP9.55□□□□□ -0.88
SKA2-203ENST00000578105 ARHGEF1Q92888 912 aaKnown RBP9.55□□□□□ -0.88
SKA2-203ENST00000578105 NSUN4Q96CB9 384 aaKnown RBP9.55□□□□□ -0.88
SKA2-203ENST00000578105 ZNF287Q9HBT7 754 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 ABCF2Q9UG63 623 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 PCDHA7Q9UN72 937 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 LAMB1P07942 1786 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 XDHP47989 1333 aa9.55□□□□□ -0.88
SKA2-203ENST00000578105 NEMFO60524 1076 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 CUTAO60888 179 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 BAG3O95817 575 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 MMP1P03956 469 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 TPM2P07951 284 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 ATP2B4P23634 1241 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 TM4SF1P30408 202 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 ST5P78524 1137 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 AKAP17AQ02040 695 aaKnown RBP9.54□□□□□ -0.88
SKA2-203ENST00000578105 CTDSPL2Q05D32 466 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 SEC23AQ15436 765 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 ANO6Q4KMQ2 910 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 ZNF804AQ7Z570 1209 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 CATIPQ7Z7H3 387 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 MICU3Q86XE3 530 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 ZNF654Q8IZM8 581 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 CRACR2BQ8N4Y2 399 aaPredicted RBP9.54□□□□□ -0.88
SKA2-203ENST00000578105 FANCBQ8NB91 859 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 CBX8Q9HC52 389 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 BRMS1Q9HCU9 246 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 GPHNQ9NQX3 736 aaPredicted RBP9.54□□□□□ -0.88
SKA2-203ENST00000578105 FAM217BQ9NTX9 383 aaPredicted RBP9.54□□□□□ -0.88
SKA2-203ENST00000578105 IRS2Q9Y4H2 1338 aa9.54□□□□□ -0.88
SKA2-203ENST00000578105 COL1A1P02452 1464 aaPredicted RBP9.53□□□□□ -0.88
SKA2-203ENST00000578105 SMTNL1A8MU46 457 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 NPHP1O15259 732 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 PRPF3O43395 683 aaKnown RBP9.53□□□□□ -0.88
SKA2-203ENST00000578105 CDC27P30260 824 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 PPP4CP60510 307 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 CAMK4Q16566 473 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 CRY2Q49AN0 593 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 CT47A1Q5JQC4 288 aaPredicted RBP9.53□□□□□ -0.88
SKA2-203ENST00000578105 MEX3CQ5U5Q3 659 aaKnown RBP9.53□□□□□ -0.88
SKA2-203ENST00000578105 KANK3Q6NY19 840 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 BICDL1Q6ZP65 573 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 FAM196AQ6ZSG2 479 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 NOSTRINQ8IVI9 506 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 CNBD1Q8NA66 436 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 PIBF1Q8WXW3 757 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 MRFAP1L1Q96HT8 127 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 ZSCAN10Q96SZ4 725 aaPredicted RBP9.53□□□□□ -0.88
SKA2-203ENST00000578105 SDF4Q9BRK5 362 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 PYM1Q9BRP8 204 aaKnown RBP9.53□□□□□ -0.88
SKA2-203ENST00000578105 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.53□□□□□ -0.88
SKA2-203ENST00000578105 TOMM22Q9NS69 142 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.53□□□□□ -0.88
SKA2-203ENST00000578105 TNKSO95271 1327 aa9.53□□□□□ -0.88
SKA2-203ENST00000578105 ROBO3Q96MS0 1386 aa9.52□□□□□ -0.88
SKA2-203ENST00000578105 BECN2A8MW95 431 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 PRKAB2O43741 272 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 BBOX1O75936 387 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 KIF5BP33176 963 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 GNAQP50148 359 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 PTPN5P54829 565 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 GUCY1B3Q02153 619 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 MECOMQ03112 1051 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 AXDND1Q5T1B0 1012 aaPredicted RBP9.52□□□□□ -0.89
SKA2-203ENST00000578105 IFIT1BQ5T764 474 aaKnown RBP9.52□□□□□ -0.89
SKA2-203ENST00000578105 NBPF11Q86T75 865 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 PLA2G4DQ86XP0 818 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 DGKHQ86XP1 1220 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 CKAP2LQ8IYA6 745 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 MIGA1Q8NAN2 632 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 TBC1D22AQ8WUA7 517 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 ANKS1AQ92625 1134 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 RBM17Q96I25 401 aaKnown RBP9.52□□□□□ -0.89
SKA2-203ENST00000578105 CRAMP1Q96RY5 1269 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 SLC26A6Q9BXS9 759 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 TCP11L1Q9NUJ3 509 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 PODXL2Q9NZ53 605 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 KIAA1468Q9P260 1216 aa9.52□□□□□ -0.89
SKA2-203ENST00000578105 TAOK2Q9UL54 1235 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms