RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ZC4H2Q9NQZ6 224 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 DDX21Q9NR30 783 aaKnown RBP eCLIP7.87□□□□□ -1.15
CNOT1-216ENST00000569240 IRAK4Q9NWZ3 460 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 ABCC2Q92887 1545 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 H7C1D1 291 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 SGSM2O43147 1006 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 TBCAO75347 108 aaKnown RBP7.87□□□□□ -1.15
CNOT1-216ENST00000569240 HSPA8P11142 646 aaKnown RBP7.87□□□□□ -1.15
CNOT1-216ENST00000569240 PCYT1AP49585 367 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 INF2Q27J81 1249 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 THUMPD2Q9BTF0 503 aaKnown RBP7.87□□□□□ -1.15
CNOT1-216ENST00000569240 MMRN2Q9H8L6 949 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 MRPL40Q9NQ50 206 aaKnown RBP7.87□□□□□ -1.15
CNOT1-216ENST00000569240 KLC4Q9NSK0 619 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 INTS9Q9NV88 658 aaKnown RBP7.87□□□□□ -1.15
CNOT1-216ENST00000569240 ZNF644Q9H582 1327 aaPredicted RBP7.87□□□□□ -1.15
CNOT1-216ENST00000569240 MEFVO15553 781 aaPredicted RBP7.87□□□□□ -1.15
CNOT1-216ENST00000569240 HARSP12081 509 aaKnown RBP7.87□□□□□ -1.15
CNOT1-216ENST00000569240 NR1D1P20393 614 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 PPANQ9NQ55 473 aaKnown RBP7.87□□□□□ -1.15
CNOT1-216ENST00000569240 FANCD2Q9BXW9 1451 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 MAP3K5Q99683 1374 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 CCDC188H7C350 402 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 ZNF202O95125 648 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 NT5C2P49902 561 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 E2F4Q16254 413 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 CEP85Q6P2H3 762 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 APBB1IPQ7Z5R6 666 aaPredicted RBP7.87□□□□□ -1.15
CNOT1-216ENST00000569240 CCDC13Q8IYE1 715 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 ATP2A3Q93084 1043 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 SMARCA5O60264 1052 aaPredicted RBP7.87□□□□□ -1.15
CNOT1-216ENST00000569240 ATP2B3Q16720 1220 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 TBC1D22AQ8WUA7 517 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 TXNDC16Q9P2K2 825 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 AMOTL2Q9Y2J4 779 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 PEG3Q9GZU2 1588 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 STRN3Q13033 797 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 RTN1Q16799 776 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 HIBCHQ6NVY1 386 aaPredicted RBP7.86□□□□□ -1.15
CNOT1-216ENST00000569240 GPT2Q8TD30 523 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 C10orf88Q9H8K7 445 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 IL1RAPL1Q9NZN1 696 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 PDP2Q9P2J9 529 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 SPG7Q9UQ90 795 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 IFT140Q96RY7 1462 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 LOC102724159A0A0B4J2E5 919 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 CCND1P24385 295 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 PSMC4P43686 418 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 PWP2Q15269 919 aaKnown RBP7.86□□□□□ -1.15
CNOT1-216ENST00000569240 TEDDM1Q5T9Z0 273 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 Q6ZUG5 572 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 PBKQ96KB5 322 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.86□□□□□ -1.15
CNOT1-216ENST00000569240 POLR3DP05423 398 aaPredicted RBP7.86□□□□□ -1.15
CNOT1-216ENST00000569240 ADCY2Q08462 1091 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 SPATA1Q5VX52 437 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 PPP4R3AQ6IN85 833 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 SLF2Q8IX21 1173 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 LTV1Q96GA3 475 aaPredicted RBP7.86□□□□□ -1.15
CNOT1-216ENST00000569240 PACSIN2Q9UNF0 486 aaPredicted RBP7.86□□□□□ -1.15
CNOT1-216ENST00000569240 RTEL1-TNFRSF6BF6WH68 1400 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 ADRM1Q16186 407 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 ESR2Q92731 530 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 ZNF653Q96CK0 615 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 IFIH1Q9BYX4 1025 aaKnown RBP7.86□□□□□ -1.15
CNOT1-216ENST00000569240 COL17A1Q9UMD9 1497 aaPredicted RBP7.86□□□□□ -1.15
CNOT1-216ENST00000569240 EIF2S1P05198 315 aaKnown RBP7.86□□□□□ -1.15
CNOT1-216ENST00000569240 HOXB7P09629 217 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 SWT1Q5T5J6 900 aaKnown RBP7.86□□□□□ -1.15
CNOT1-216ENST00000569240 C6orf118Q5T5N4 469 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 KIFAP3Q92845 792 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 TUBA8Q9NY65 449 aaPredicted RBP7.86□□□□□ -1.15
CNOT1-216ENST00000569240 PRR16Q569H4 304 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 GRAMD4Q6IC98 578 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 MFSD6Q6ZSS7 791 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 RBM42Q9BTD8 480 aaKnown RBP7.86□□□□□ -1.15
CNOT1-216ENST00000569240 OSBPL3Q9H4L5 887 aa7.86□□□□□ -1.15
CNOT1-216ENST00000569240 NOC2LQ9Y3T9 749 aaKnown RBP7.86□□□□□ -1.15
CNOT1-216ENST00000569240 FAM177BA6PVY3 158 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 EIF3DO15371 548 aaKnown RBP eCLIP7.85□□□□□ -1.154e-6■■□□□ 11.4
CNOT1-216ENST00000569240 POLE2P56282 527 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 HS2ST1Q7LGA3 356 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 MSL3Q8N5Y2 521 aaKnown RBP7.85□□□□□ -1.15
CNOT1-216ENST00000569240 FGD4Q96M96 766 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 NOC4LQ9BVI4 516 aaKnown RBP7.85□□□□□ -1.15
CNOT1-216ENST00000569240 BOLA2Q9H3K6 86 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 CABP2Q9NPB3 220 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 ERCC6Q03468 1493 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 DHX9Q08211 1270 aaKnown RBP7.85□□□□□ -1.15
CNOT1-216ENST00000569240 WTAPQ15007 396 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 ZNF483Q8TF39 744 aaPredicted RBP7.85□□□□□ -1.15
CNOT1-216ENST00000569240 POLE3Q9NRF9 147 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 ZBTB7BO15156 539 aaPredicted RBP7.85□□□□□ -1.15
CNOT1-216ENST00000569240 EEF1GP26641 437 aaKnown RBP7.85□□□□□ -1.15
CNOT1-216ENST00000569240 KRT2P35908 639 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 HSPA9P38646 679 aaKnown RBP7.85□□□□□ -1.15
CNOT1-216ENST00000569240 ASIC1P78348 528 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 TRIM68Q6AZZ1 485 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 ARHGEF25Q86VW2 580 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 TCOF1Q13428 1488 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 849.7 ms