RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 IMPACTQ9P2X3 320 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 RTCBQ9Y3I0 505 aaKnown RBP11.1□□□□□ -0.63
TCF4-240ENST00000568673 PRPF3O43395 683 aaKnown RBP11.1□□□□□ -0.63
TCF4-240ENST00000568673 CALM1P0DP23 149 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 CALM2P0DP24 149 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 CALM3P0DP25 149 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 GSDMDP57764 484 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 FUT2Q10981 343 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 TROAPQ12815 778 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 PNOCQ13519 176 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 ARID5BQ14865 1188 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 METTL16Q86W50 562 aaKnown RBP11.1□□□□□ -0.63
TCF4-240ENST00000568673 ZNF579Q8NAF0 562 aaKnown RBP11.1□□□□□ -0.63
TCF4-240ENST00000568673 RBM28Q9NW13 759 aaKnown RBP11.1□□□□□ -0.63
TCF4-240ENST00000568673 TFCP2L1Q9NZI6 479 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 MYH2Q9UKX2 1941 aa11.09□□□□□ -0.63
TCF4-240ENST00000568673 PRDM1O75626 825 aa11.09□□□□□ -0.63
TCF4-240ENST00000568673 TM4SF1P30408 202 aa11.09□□□□□ -0.63
TCF4-240ENST00000568673 PKN1Q16512 942 aa11.09□□□□□ -0.63
TCF4-240ENST00000568673 ISM2Q6H9L7 571 aa11.09□□□□□ -0.63
TCF4-240ENST00000568673 FNBP4Q8N3X1 1017 aaPredicted RBP11.09□□□□□ -0.63
TCF4-240ENST00000568673 CRNKL1Q9BZJ0 848 aaKnown RBP11.09□□□□□ -0.63
TCF4-240ENST00000568673 OSBPL5Q9H0X9 879 aaPredicted RBP11.09□□□□□ -0.63
TCF4-240ENST00000568673 DCP1AQ9NPI6 582 aaPredicted RBP11.09□□□□□ -0.63
TCF4-240ENST00000568673 ATP8A2Q9NTI2 1148 aa11.09□□□□□ -0.63
TCF4-240ENST00000568673 FBXO2Q9UK22 296 aaPredicted RBP11.09□□□□□ -0.63
TCF4-240ENST00000568673 CEP131Q9UPN4 1083 aa11.09□□□□□ -0.63
TCF4-240ENST00000568673 DUOX1Q9NRD9 1551 aa11.09□□□□□ -0.63
TCF4-240ENST00000568673 BAZ2AQ9UIF9 1905 aaKnown RBP11.09□□□□□ -0.63
TCF4-240ENST00000568673 ORC4O43929 436 aa11.09□□□□□ -0.63
TCF4-240ENST00000568673 SKILP12757 684 aa11.09□□□□□ -0.63
TCF4-240ENST00000568673 MDM2Q00987 491 aaPredicted RBP11.09□□□□□ -0.63
TCF4-240ENST00000568673 FOXP4Q8IVH2 680 aaPredicted RBP11.09□□□□□ -0.63
TCF4-240ENST00000568673 OXER1Q8TDS5 423 aa11.09□□□□□ -0.63
TCF4-240ENST00000568673 ARHGEF1Q92888 912 aaKnown RBP11.09□□□□□ -0.63
TCF4-240ENST00000568673 MAP7D2Q96T17 732 aa11.09□□□□□ -0.63
TCF4-240ENST00000568673 XPO4Q9C0E2 1151 aaKnown RBP11.09□□□□□ -0.63
TCF4-240ENST00000568673 CABP5Q9NP86 173 aa11.09□□□□□ -0.63
TCF4-240ENST00000568673 AATFQ9NY61 560 aaKnown RBP eCLIP11.09□□□□□ -0.63
TCF4-240ENST00000568673 HOOK1Q9UJC3 728 aaKnown RBP11.09□□□□□ -0.63
TCF4-240ENST00000568673 CCNL1Q9UK58 526 aaPredicted RBP11.09□□□□□ -0.63
TCF4-240ENST00000568673 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
TCF4-240ENST00000568673 PCDHB6Q9Y5E3 794 aa11.09□□□□□ -0.63
TCF4-240ENST00000568673 SRPRBQ9Y5M8 271 aaKnown RBP11.09□□□□□ -0.63
TCF4-240ENST00000568673 PRDX5P30044 214 aa11.08□□□□□ -0.64
TCF4-240ENST00000568673 IFNKQ9P0W0 207 aa11.08□□□□□ -0.64
TCF4-240ENST00000568673 PCDHA5Q9Y5H7 936 aa11.08□□□□□ -0.64
TCF4-240ENST00000568673 MORC2Q9Y6X9 1032 aaPredicted RBP11.08□□□□□ -0.64
TCF4-240ENST00000568673 COL24A1Q17RW2 1714 aa11.08□□□□□ -0.64
TCF4-240ENST00000568673 DDAH1O94760 285 aa11.08□□□□□ -0.64
TCF4-240ENST00000568673 SMC2O95347 1197 aa11.08□□□□□ -0.64
TCF4-240ENST00000568673 CCZ1BP86790 482 aa11.08□□□□□ -0.64
TCF4-240ENST00000568673 CCZ1P86791 482 aaPredicted RBP11.08□□□□□ -0.64
TCF4-240ENST00000568673 TPD52L1Q16890 204 aaPredicted RBP11.08□□□□□ -0.64
TCF4-240ENST00000568673 SBK1Q52WX2 424 aa11.08□□□□□ -0.64
TCF4-240ENST00000568673 SPECC1Q5M775 1068 aa11.08□□□□□ -0.64
TCF4-240ENST00000568673 MTERF4Q7Z6M4 381 aaKnown RBP11.08□□□□□ -0.64
TCF4-240ENST00000568673 CCDC24Q8N4L8 307 aa11.08□□□□□ -0.64
TCF4-240ENST00000568673 SHISA4Q96DD7 197 aa11.08□□□□□ -0.64
TCF4-240ENST00000568673 C16orf45Q96MC5 204 aaPredicted RBP11.08□□□□□ -0.64
TCF4-240ENST00000568673 NOL10Q9BSC4 688 aaKnown RBP11.08□□□□□ -0.64
TCF4-240ENST00000568673 PHF20Q9BVI0 1012 aa11.08□□□□□ -0.64
TCF4-240ENST00000568673 HSD3B7Q9H2F3 369 aa11.08□□□□□ -0.64
TCF4-240ENST00000568673 V9GY48 417 aaPredicted RBP11.08□□□□□ -0.64
TCF4-240ENST00000568673 RIOK3O14730 519 aaKnown RBP11.07□□□□□ -0.64
TCF4-240ENST00000568673 TNNT1P13805 278 aa11.07□□□□□ -0.64
TCF4-240ENST00000568673 LMOD1P29536 600 aaPredicted RBP11.07□□□□□ -0.64
TCF4-240ENST00000568673 MYL5Q02045 173 aa11.07□□□□□ -0.64
TCF4-240ENST00000568673 GRIN1Q05586 938 aa11.07□□□□□ -0.64
TCF4-240ENST00000568673 DHX8Q14562 1220 aaKnown RBP11.07□□□□□ -0.64
TCF4-240ENST00000568673 OLFM4Q6UX06 510 aa11.07□□□□□ -0.64
TCF4-240ENST00000568673 TXNRD3Q86VQ6 643 aa11.07□□□□□ -0.64
TCF4-240ENST00000568673 VPS54Q9P1Q0 977 aa11.07□□□□□ -0.64
TCF4-240ENST00000568673 ARPP21Q9UBL0 812 aaPredicted RBP11.07□□□□□ -0.64
TCF4-240ENST00000568673 MYH6P13533 1939 aa11.07□□□□□ -0.64
TCF4-240ENST00000568673 IRS2Q9Y4H2 1338 aa11.07□□□□□ -0.64
TCF4-240ENST00000568673 POLR2DO15514 142 aaKnown RBP11.06□□□□□ -0.64
TCF4-240ENST00000568673 IGSF3O75054 1194 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 PLEKHA8P1O95397 391 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 KRT2P35908 639 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 FANCCQ00597 558 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 NT5DC1Q5TFE4 455 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 SPTY2D1Q68D10 685 aaPredicted RBP11.06□□□□□ -0.64
TCF4-240ENST00000568673 AMIGO3Q86WK7 504 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 KCND1Q9NSA2 647 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 BTAF1O14981 1849 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 TRIM75PA6NK02 468 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 MYO1BO43795 1136 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 ATP2B1P20020 1258 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 PDE4BQ07343 736 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 POSTNQ15063 836 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 KANK3Q6NY19 840 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 TMTC3Q6ZXV5 915 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 PAXBP1Q9Y5B6 917 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 MYH13Q9UKX3 1938 aa11.06□□□□□ -0.64
TCF4-240ENST00000568673 NPHP1O15259 732 aa11.05□□□□□ -0.64
TCF4-240ENST00000568673 FOXN1O15353 648 aa11.05□□□□□ -0.64
TCF4-240ENST00000568673 BMP6P22004 513 aa11.05□□□□□ -0.64
TCF4-240ENST00000568673 RFC4P35249 363 aa11.05□□□□□ -0.64
TCF4-240ENST00000568673 EVX2Q03828 476 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms