RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 BBOX1O75936 387 aa15.39■□□□□ 0.05
LINC00563-201ENST00000566370 TM4SF1P30408 202 aa15.39■□□□□ 0.05
LINC00563-201ENST00000566370 KRT2P35908 639 aa15.39■□□□□ 0.05
LINC00563-201ENST00000566370 KANK3Q6NY19 840 aa15.39■□□□□ 0.05
LINC00563-201ENST00000566370 PTF1AQ7RTS3 328 aa15.39■□□□□ 0.05
LINC00563-201ENST00000566370 ENAHQ8N8S7 591 aaPredicted RBP15.39■□□□□ 0.05
LINC00563-201ENST00000566370 AIFM3Q96NN9 605 aa15.39■□□□□ 0.05
LINC00563-201ENST00000566370 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.39■□□□□ 0.05
LINC00563-201ENST00000566370 TAOK2Q9UL54 1235 aa15.39■□□□□ 0.05
LINC00563-201ENST00000566370 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.39■□□□□ 0.05
LINC00563-201ENST00000566370 UBR3Q6ZT12 1888 aa15.38■□□□□ 0.05
LINC00563-201ENST00000566370 FAM237AA0A1B0GTK4 181 aa15.38■□□□□ 0.05
LINC00563-201ENST00000566370 NRDCO43847 1150 aa15.38■□□□□ 0.05
LINC00563-201ENST00000566370 GNAQP50148 359 aa15.38■□□□□ 0.05
LINC00563-201ENST00000566370 NLRP12P59046 1061 aa15.38■□□□□ 0.05
LINC00563-201ENST00000566370 RESP18Q5W5W9 173 aa15.38■□□□□ 0.05
LINC00563-201ENST00000566370 PRR5LQ6MZQ0 368 aa15.38■□□□□ 0.05
LINC00563-201ENST00000566370 NBPF11Q86T75 865 aa15.38■□□□□ 0.05
LINC00563-201ENST00000566370 PLA2G4DQ86XP0 818 aa15.38■□□□□ 0.05
LINC00563-201ENST00000566370 ELOA2Q8IYF1 753 aaPredicted RBP15.38■□□□□ 0.05
LINC00563-201ENST00000566370 TBC1D22AQ8WUA7 517 aa15.38■□□□□ 0.05
LINC00563-201ENST00000566370 MRFAP1L1Q96HT8 127 aa15.38■□□□□ 0.05
LINC00563-201ENST00000566370 DACH1Q9UI36 760 aa15.38■□□□□ 0.05
LINC00563-201ENST00000566370 GGA1Q9UJY5 639 aa15.38■□□□□ 0.05
LINC00563-201ENST00000566370 MORC2Q9Y6X9 1032 aaPredicted RBP15.38■□□□□ 0.05
LINC00563-201ENST00000566370 MYO1BO43795 1136 aa15.37■□□□□ 0.05
LINC00563-201ENST00000566370 SERPINB2P05120 415 aa15.37■□□□□ 0.05
LINC00563-201ENST00000566370 MARCKSP29966 332 aaPredicted RBP15.37■□□□□ 0.05
LINC00563-201ENST00000566370 PRDX5P30044 214 aa15.37■□□□□ 0.05
LINC00563-201ENST00000566370 IQCB1Q15051 598 aa15.37■□□□□ 0.05
LINC00563-201ENST00000566370 PTPAQ15257 358 aa15.37■□□□□ 0.05
LINC00563-201ENST00000566370 AXDND1Q5T1B0 1012 aaPredicted RBP15.37■□□□□ 0.05
LINC00563-201ENST00000566370 FAM182BQ5T319 152 aa15.37■□□□□ 0.05
LINC00563-201ENST00000566370 OLFM4Q6UX06 510 aa15.37■□□□□ 0.05
LINC00563-201ENST00000566370 SPC24Q8NBT2 197 aa15.37■□□□□ 0.05
LINC00563-201ENST00000566370 TMX4Q9H1E5 349 aaPredicted RBP15.37■□□□□ 0.05
LINC00563-201ENST00000566370 KAT14Q9H8E8 782 aa15.37■□□□□ 0.05
LINC00563-201ENST00000566370 GJB4Q9NTQ9 266 aa15.37■□□□□ 0.05
LINC00563-201ENST00000566370 MCM9Q9NXL9 1143 aa15.37■□□□□ 0.05
LINC00563-201ENST00000566370 CLIP2Q9UDT6 1046 aa15.37■□□□□ 0.05
LINC00563-201ENST00000566370 TACC3Q9Y6A5 838 aa15.37■□□□□ 0.05
LINC00563-201ENST00000566370 MYH2Q9UKX2 1941 aa15.37■□□□□ 0.05
LINC00563-201ENST00000566370 UFL1O94874 794 aa15.36■□□□□ 0.05
LINC00563-201ENST00000566370 KLRK1P26718 216 aa15.36■□□□□ 0.05
LINC00563-201ENST00000566370 CCDC24Q8N4L8 307 aa15.36■□□□□ 0.05
LINC00563-201ENST00000566370 ZNF579Q8NAF0 562 aaKnown RBP15.36■□□□□ 0.05
LINC00563-201ENST00000566370 MAP3K14Q99558 947 aa15.36■□□□□ 0.05
LINC00563-201ENST00000566370 NAV1Q8NEY1 1877 aa15.36■□□□□ 0.05
LINC00563-201ENST00000566370 TRIM75PA6NK02 468 aa15.35■□□□□ 0.05
LINC00563-201ENST00000566370 BTBD18B2RXH4 712 aa15.35■□□□□ 0.05
LINC00563-201ENST00000566370 CALML3P27482 149 aa15.35■□□□□ 0.05
LINC00563-201ENST00000566370 PPP4CP60510 307 aa15.35■□□□□ 0.05
LINC00563-201ENST00000566370 C11orf57Q6ZUT1 292 aaPredicted RBP15.35■□□□□ 0.05
LINC00563-201ENST00000566370 TMTC3Q6ZXV5 915 aa15.35■□□□□ 0.05
LINC00563-201ENST00000566370 SMIM5Q71RC9 77 aa15.35■□□□□ 0.05
LINC00563-201ENST00000566370 DGKHQ86XP1 1220 aa15.35■□□□□ 0.05
LINC00563-201ENST00000566370 FAM177A1Q8N128 213 aaPredicted RBP15.35■□□□□ 0.05
LINC00563-201ENST00000566370 CNNM3Q8NE01 707 aa15.35■□□□□ 0.05
LINC00563-201ENST00000566370 CRAMP1Q96RY5 1269 aa15.35■□□□□ 0.05
LINC00563-201ENST00000566370 PYM1Q9BRP8 204 aaKnown RBP15.35■□□□□ 0.05
LINC00563-201ENST00000566370 MKNK2Q9HBH9 465 aa15.35■□□□□ 0.05
LINC00563-201ENST00000566370 HPSEQ9Y251 543 aa15.35■□□□□ 0.05
LINC00563-201ENST00000566370 ROBO3Q96MS0 1386 aa15.35■□□□□ 0.05
LINC00563-201ENST00000566370 GSDMDP57764 484 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 NOLC1Q14978 699 aaKnown RBP eCLIP15.34■□□□□ 0.05
LINC00563-201ENST00000566370 CRY2Q49AN0 593 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 ZNF444Q8N0Y2 327 aaPredicted RBP15.34■□□□□ 0.05
LINC00563-201ENST00000566370 CCDC82Q8N4S0 544 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 AOPEPQ8N6M6 819 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 NKX2-3Q8TAU0 364 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 TTC12Q9H892 705 aaPredicted RBP15.34■□□□□ 0.05
LINC00563-201ENST00000566370 QTRT2Q9H974 415 aaKnown RBP15.34■□□□□ 0.05
LINC00563-201ENST00000566370 KCNH3Q9ULD8 1083 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 KCNJ14Q9UNX9 436 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 MROH7-TTC4A0A0A0MT08 1334 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 IRS2Q9Y4H2 1338 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 CYP2D7A0A087X1C5 515 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 IKBKBO14920 756 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 CBFA2T2O43439 604 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 PRDM1O75626 825 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 WDHD1O75717 1129 aaPredicted RBP15.34■□□□□ 0.05
LINC00563-201ENST00000566370 GYS1P13807 737 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 C12orf60Q5U649 245 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 KRT27Q7Z3Y8 459 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 ZNF384Q8TF68 577 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 FERMT2Q96AC1 680 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 LZTS2Q9BRK4 669 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 PHF20Q9BVI0 1012 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 PODXL2Q9NZ53 605 aa15.34■□□□□ 0.05
LINC00563-201ENST00000566370 TSPY3P0CV98 308 aa15.33■□□□□ 0.04
LINC00563-201ENST00000566370 TSPY8P0CW00 308 aa15.33■□□□□ 0.04
LINC00563-201ENST00000566370 PTPREP23469 700 aa15.33■□□□□ 0.04
LINC00563-201ENST00000566370 HOXA10P31260 410 aaPredicted RBP15.33■□□□□ 0.04
LINC00563-201ENST00000566370 TRAPPC10P48553 1259 aa15.33■□□□□ 0.04
LINC00563-201ENST00000566370 TROAPQ12815 778 aa15.33■□□□□ 0.04
LINC00563-201ENST00000566370 SHC4Q6S5L8 630 aa15.33■□□□□ 0.04
LINC00563-201ENST00000566370 KRBA2Q6ZNG9 492 aa15.33■□□□□ 0.04
LINC00563-201ENST00000566370 FLAD1Q8NFF5 587 aa15.33■□□□□ 0.04
LINC00563-201ENST00000566370 SH3GLB2Q9NR46 395 aa15.33■□□□□ 0.04
LINC00563-201ENST00000566370 IMPACTQ9P2X3 320 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms