RNA–Protein interactions for RNA: ENST00000566042.5

CPNE2-206, Transcript of copine 2, humanhuman

TSL 2

Gene CPNE2, Length 3,446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-206ENST00000566042 USP17L3A6NCW0 530 aa11.83□□□□□ -0.52
CPNE2-206ENST00000566042 USP17L4A6NCW7 530 aa11.83□□□□□ -0.52
CPNE2-206ENST00000566042 EARS2Q5JPH6 523 aaKnown RBP11.83□□□□□ -0.52
CPNE2-206ENST00000566042 ATL3Q6DD88 541 aa11.83□□□□□ -0.52
CPNE2-206ENST00000566042 USP17L1Q7RTZ2 530 aa11.83□□□□□ -0.52
CPNE2-206ENST00000566042 STX1AQ16623 288 aa11.83□□□□□ -0.52
CPNE2-206ENST00000566042 TXNRD1Q16881 649 aa11.83□□□□□ -0.52
CPNE2-206ENST00000566042 HS1BP3Q53T59 392 aa11.83□□□□□ -0.52
CPNE2-206ENST00000566042 ZNF804AQ7Z570 1209 aa11.83□□□□□ -0.52
CPNE2-206ENST00000566042 MXD3Q9BW11 206 aa11.83□□□□□ -0.52
CPNE2-206ENST00000566042 POLLQ9UGP5 575 aa11.83□□□□□ -0.52
CPNE2-206ENST00000566042 SEMA3EO15041 775 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 FOXN1O15353 648 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 DEXIO95424 95 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 TOB1P50616 345 aaPredicted RBP11.82□□□□□ -0.52
CPNE2-206ENST00000566042 TFAP4Q01664 338 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 LRMPQ12912 555 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 CPVLQ9H3G5 476 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 STX8Q9UNK0 236 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 THSD7AQ9UPZ6 1657 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 CCDC196A0A1B0GTZ2 297 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 SYKP43405 635 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 PLCD1P51178 756 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 PNOCQ13519 176 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 PTPAQ15257 358 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 HSP90AA4PQ58FG1 418 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 MAP3K14Q99558 947 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 MKNK2Q9HBH9 465 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 CD209Q9NNX6 404 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 ANAPC4Q9UJX5 808 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 GGA1Q9UJY5 639 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 CASZ1Q86V15 1759 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 NHSQ6T4R5 1651 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 SLC3A2P08195 630 aaKnown RBP11.82□□□□□ -0.52
CPNE2-206ENST00000566042 U2AF2P26368 475 aaKnown RBP eCLIP11.82□□□□□ -0.52
CPNE2-206ENST00000566042 MFSD14BQ5SR56 506 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 CCDC186Q7Z3E2 898 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 TMTC2Q8N394 836 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 KCNF1Q9H3M0 494 aa11.82□□□□□ -0.52
CPNE2-206ENST00000566042 CHD4Q14839 1912 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 WNT7AO00755 349 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 ADAMTS3O15072 1205 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 KIAA2012Q0VF49 1180 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 TROAPQ12815 778 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 PTPN21Q16825 1174 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 ZNF827Q17R98 1081 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 PYCARDQ9ULZ3 195 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 A0A1W2PQ27 194 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 A0A1W2PQ64 194 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 A0A1W2PQD8 194 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 BTDP43251 543 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 PICALMQ13492 652 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 USP49Q70CQ1 688 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 GRAMD1CQ8IYS0 662 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 TDRD7Q8NHU6 1098 aaKnown RBP11.81□□□□□ -0.52
CPNE2-206ENST00000566042 WASF1Q92558 559 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 IRS2Q9Y4H2 1338 aa11.81□□□□□ -0.52
CPNE2-206ENST00000566042 ONECUT3O60422 494 aaPredicted RBP11.8□□□□□ -0.52
CPNE2-206ENST00000566042 GOLGA8HP0CJ92 632 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 GTF2IP78347 998 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 PDE4BQ07343 736 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 ARID5BQ14865 1188 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 IQCB1Q15051 598 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 PKN1Q16512 942 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 DOK7Q18PE1 504 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 SRBD1Q8N5C6 995 aaKnown RBP11.8□□□□□ -0.52
CPNE2-206ENST00000566042 CTCFLQ8NI51 663 aaPredicted RBP11.8□□□□□ -0.52
CPNE2-206ENST00000566042 WDR66Q8TBY9 1149 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 GPKOWQ92917 476 aaPredicted RBP eCLIP11.8□□□□□ -0.52
CPNE2-206ENST00000566042 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 LEMD3Q9Y2U8 911 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 CTAGE5O15320 804 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 SPTY2D1Q68D10 685 aaPredicted RBP11.8□□□□□ -0.52
CPNE2-206ENST00000566042 FILIP1Q7Z7B0 1213 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 STAG2Q8N3U4 1231 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 RBM17Q96I25 401 aaKnown RBP11.8□□□□□ -0.52
CPNE2-206ENST00000566042 NOL10Q9BSC4 688 aaKnown RBP11.8□□□□□ -0.52
CPNE2-206ENST00000566042 ATP8A2Q9NTI2 1148 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 SRCAPQ6ZRS2 3230 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 POLRMTO00411 1230 aaKnown RBP11.8□□□□□ -0.52
CPNE2-206ENST00000566042 APBA3O96018 575 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 SLURP2P0DP57 97 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 CMA1P23946 247 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 ZNF75DP51815 510 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 LONRF3Q496Y0 759 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 DHX40Q8IX18 779 aaKnown RBP11.8□□□□□ -0.52
CPNE2-206ENST00000566042 CEP57L1Q8IYX8 460 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 ANO10Q9NW15 660 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 ARPP21Q9UBL0 812 aaPredicted RBP11.8□□□□□ -0.52
CPNE2-206ENST00000566042 CLIP2Q9UDT6 1046 aa11.8□□□□□ -0.52
CPNE2-206ENST00000566042 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.8□□□□□ -0.52
CPNE2-206ENST00000566042 TBC1D16Q8TBP0 767 aa11.79□□□□□ -0.52
CPNE2-206ENST00000566042 STK36Q9NRP7 1315 aa11.79□□□□□ -0.52
CPNE2-206ENST00000566042 MYH15Q9Y2K3 1946 aa11.79□□□□□ -0.52
CPNE2-206ENST00000566042 A0A1B0GUL6 1792 aa11.79□□□□□ -0.52
CPNE2-206ENST00000566042 VGLL3A8MV65 326 aa11.79□□□□□ -0.52
CPNE2-206ENST00000566042 TSPY3P0CV98 308 aa11.79□□□□□ -0.52
CPNE2-206ENST00000566042 TSPY8P0CW00 308 aa11.79□□□□□ -0.52
CPNE2-206ENST00000566042 ZNF174Q15697 407 aa11.79□□□□□ -0.52
CPNE2-206ENST00000566042 CCDC144BQ3MJ40 725 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms