RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ABCA5Q8WWZ7 1642 aa7.72□□□□□ -1.17
SMG1-206ENST00000562668 GNAT3A8MTJ3 354 aa7.72□□□□□ -1.17
SMG1-206ENST00000562668 EOMESO95936 686 aa7.72□□□□□ -1.17
SMG1-206ENST00000562668 RPS26P62854 115 aaKnown RBP7.72□□□□□ -1.17
SMG1-206ENST00000562668 CCDC85BQ15834 202 aaPredicted RBP7.72□□□□□ -1.17
SMG1-206ENST00000562668 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.72□□□□□ -1.17
SMG1-206ENST00000562668 PI4K2BQ8TCG2 481 aa7.72□□□□□ -1.17
SMG1-206ENST00000562668 DUSP9Q99956 384 aaKnown RBP7.72□□□□□ -1.17
SMG1-206ENST00000562668 FBRSQ9HAH7 460 aa7.72□□□□□ -1.17
SMG1-206ENST00000562668 PRDM5Q9NQX1 630 aaPredicted RBP7.72□□□□□ -1.17
SMG1-206ENST00000562668 AK5Q9Y6K8 562 aa7.72□□□□□ -1.17
SMG1-206ENST00000562668 ANKRD33BA6NCL7 494 aa7.71□□□□□ -1.18
SMG1-206ENST00000562668 CLCN7P51798 805 aa7.71□□□□□ -1.18
SMG1-206ENST00000562668 EAPPQ56P03 285 aaPredicted RBP7.71□□□□□ -1.18
SMG1-206ENST00000562668 ATG4DQ86TL0 474 aaPredicted RBP7.71□□□□□ -1.18
SMG1-206ENST00000562668 LRRN4CLQ8ND94 238 aa7.71□□□□□ -1.18
SMG1-206ENST00000562668 FOXQ1Q9C009 403 aa7.71□□□□□ -1.18
SMG1-206ENST00000562668 WNT10AQ9GZT5 417 aa7.71□□□□□ -1.18
SMG1-206ENST00000562668 SNCAIPQ9Y6H5 919 aa7.71□□□□□ -1.18
SMG1-206ENST00000562668 BTBD11A6QL63 1104 aa7.7□□□□□ -1.18
SMG1-206ENST00000562668 CAP2P40123 477 aa7.7□□□□□ -1.18
SMG1-206ENST00000562668 ETF1P62495 437 aaKnown RBP7.7□□□□□ -1.18
SMG1-206ENST00000562668 NKPD1Q17RQ9 610 aa7.7□□□□□ -1.18
SMG1-206ENST00000562668 POU5F2Q8N7G0 328 aa7.7□□□□□ -1.18
SMG1-206ENST00000562668 ASB11Q8WXH4 323 aa7.7□□□□□ -1.18
SMG1-206ENST00000562668 RNF19AQ9NV58 838 aa7.7□□□□□ -1.18
SMG1-206ENST00000562668 AQRO60306 1485 aaKnown RBP eCLIP7.69□□□□□ -1.18
SMG1-206ENST00000562668 SLITRK5O94991 958 aa7.69□□□□□ -1.18
SMG1-206ENST00000562668 LMNB1P20700 586 aa7.69□□□□□ -1.18
SMG1-206ENST00000562668 CDK8P49336 464 aa7.69□□□□□ -1.18
SMG1-206ENST00000562668 IKZF1Q13422 519 aa7.69□□□□□ -1.18
SMG1-206ENST00000562668 SEPT6Q14141 434 aa7.69□□□□□ -1.18
SMG1-206ENST00000562668 SLBPQ14493 270 aaKnown RBP eCLIP7.69□□□□□ -1.18
SMG1-206ENST00000562668 SLC23A3Q6PIS1 610 aa7.69□□□□□ -1.18
SMG1-206ENST00000562668 MIPEPQ99797 713 aa7.69□□□□□ -1.18
SMG1-206ENST00000562668 PITPNM2Q9BZ72 1349 aa7.69□□□□□ -1.18
SMG1-206ENST00000562668 PBRM1Q86U86 1689 aa7.68□□□□□ -1.18
SMG1-206ENST00000562668 LIG3P49916 1009 aa7.68□□□□□ -1.18
SMG1-206ENST00000562668 NKG7Q16617 165 aa7.68□□□□□ -1.18
SMG1-206ENST00000562668 AGMOQ6ZNB7 445 aa7.68□□□□□ -1.18
SMG1-206ENST00000562668 C22orf34Q6ZV56 151 aa7.68□□□□□ -1.18
SMG1-206ENST00000562668 PCDHB5Q9Y5E4 795 aa7.68□□□□□ -1.18
SMG1-206ENST00000562668 TDRD9Q8NDG6 1382 aaKnown RBP7.68□□□□□ -1.18
SMG1-206ENST00000562668 MAP3K11Q16584 847 aa7.67□□□□□ -1.18
SMG1-206ENST00000562668 HID1Q8IV36 788 aa7.67□□□□□ -1.18
SMG1-206ENST00000562668 MFSD4AQ8N468 514 aa7.67□□□□□ -1.18
SMG1-206ENST00000562668 MFSD2AQ8NA29 543 aa7.67□□□□□ -1.18
SMG1-206ENST00000562668 TPX2Q9ULW0 747 aaKnown RBP7.67□□□□□ -1.18
SMG1-206ENST00000562668 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.67□□□□□ -1.18
SMG1-206ENST00000562668 CARMIL2Q6F5E8 1435 aa7.67□□□□□ -1.18
SMG1-206ENST00000562668 ZNF865P0CJ78 1059 aaPredicted RBP7.66□□□□□ -1.18
SMG1-206ENST00000562668 GRK4P32298 578 aa7.66□□□□□ -1.18
SMG1-206ENST00000562668 SFRP5Q5T4F7 317 aa7.66□□□□□ -1.18
SMG1-206ENST00000562668 MEI1Q5TIA1 1274 aa7.66□□□□□ -1.18
SMG1-206ENST00000562668 PRAMEF13Q5VWM6 474 aa7.66□□□□□ -1.18
SMG1-206ENST00000562668 NPAS4Q8IUM7 802 aa7.66□□□□□ -1.18
SMG1-206ENST00000562668 FLAD1Q8NFF5 587 aa7.66□□□□□ -1.18
SMG1-206ENST00000562668 FAM168AQ92567 244 aa7.66□□□□□ -1.18
SMG1-206ENST00000562668 KRTAP9-9Q9BYP9 154 aa7.66□□□□□ -1.18
SMG1-206ENST00000562668 KRTAP9-4Q9BYQ2 154 aa7.66□□□□□ -1.18
SMG1-206ENST00000562668 PRDM7Q9NQW5 492 aa7.66□□□□□ -1.18
SMG1-206ENST00000562668 TACC3Q9Y6A5 838 aa7.66□□□□□ -1.18
SMG1-206ENST00000562668 CST3P01034 146 aaPredicted RBP7.65□□□□□ -1.18
SMG1-206ENST00000562668 ZP2Q05996 745 aa7.65□□□□□ -1.18
SMG1-206ENST00000562668 GAPVD1Q14C86 1478 aa7.65□□□□□ -1.18
SMG1-206ENST00000562668 ZNF746Q6NUN9 644 aaPredicted RBP7.65□□□□□ -1.18
SMG1-206ENST00000562668 LETMD1Q6P1Q0 360 aa7.65□□□□□ -1.18
SMG1-206ENST00000562668 AEBP1Q8IUX7 1158 aa7.65□□□□□ -1.18
SMG1-206ENST00000562668 MIR1-1HGQ9H1L0 117 aa7.65□□□□□ -1.18
SMG1-206ENST00000562668 PARP2Q9UGN5 583 aa7.65□□□□□ -1.18
SMG1-206ENST00000562668 GRIN2BQ13224 1484 aa7.64□□□□□ -1.19
SMG1-206ENST00000562668 PRR33A8MZF0 331 aa7.64□□□□□ -1.19
SMG1-206ENST00000562668 FAM155AB1AL88 458 aaPredicted RBP7.64□□□□□ -1.19
SMG1-206ENST00000562668 GFRA2O00451 464 aa7.64□□□□□ -1.19
SMG1-206ENST00000562668 TFE3P19532 575 aaPredicted RBP7.64□□□□□ -1.19
SMG1-206ENST00000562668 PSMD2Q13200 908 aa7.64□□□□□ -1.19
SMG1-206ENST00000562668 C8AP07357 584 aa7.63□□□□□ -1.19
SMG1-206ENST00000562668 ST13P50502 369 aaKnown RBP7.63□□□□□ -1.19
SMG1-206ENST00000562668 DAB2P98082 770 aa7.63□□□□□ -1.19
SMG1-206ENST00000562668 DNAJC14Q6Y2X3 702 aaPredicted RBP7.63□□□□□ -1.19
SMG1-206ENST00000562668 SEMA3GQ9NS98 782 aa7.63□□□□□ -1.19
SMG1-206ENST00000562668 CAPN6Q9Y6Q1 641 aa7.63□□□□□ -1.19
SMG1-206ENST00000562668 CHD1O14646 1710 aa7.63□□□□□ -1.19
SMG1-206ENST00000562668 ERICH3Q5RHP9 1530 aa7.62□□□□□ -1.19
SMG1-206ENST00000562668 SNAPC4Q5SXM2 1469 aa7.62□□□□□ -1.19
SMG1-206ENST00000562668 CNTNAP4Q9C0A0 1308 aa7.62□□□□□ -1.19
SMG1-206ENST00000562668 RLBP1P12271 317 aa7.62□□□□□ -1.19
SMG1-206ENST00000562668 PDIA4P13667 645 aaKnown RBP7.62□□□□□ -1.19
SMG1-206ENST00000562668 MRPL41Q8IXM3 137 aaKnown RBP7.62□□□□□ -1.19
SMG1-206ENST00000562668 XAGE3Q8WTP9 111 aa7.62□□□□□ -1.19
SMG1-206ENST00000562668 COX4I2Q96KJ9 171 aa7.62□□□□□ -1.19
SMG1-206ENST00000562668 HSPA12BQ96MM6 686 aa7.62□□□□□ -1.19
SMG1-206ENST00000562668 NOC4LQ9BVI4 516 aaKnown RBP7.62□□□□□ -1.19
SMG1-206ENST00000562668 LMCD1Q9NZU5 365 aa7.62□□□□□ -1.19
SMG1-206ENST00000562668 ADAMTS12P58397 1594 aa7.62□□□□□ -1.19
SMG1-206ENST00000562668 RUSC2Q8N2Y8 1516 aa7.62□□□□□ -1.19
SMG1-206ENST00000562668 MAGI1Q96QZ7 1491 aaPredicted RBP7.62□□□□□ -1.19
SMG1-206ENST00000562668 PGRP06401 933 aa7.61□□□□□ -1.19
SMG1-206ENST00000562668 RPL6Q02878 288 aaKnown RBP7.61□□□□□ -1.19
SMG1-206ENST00000562668 TSNAXIP1Q2TAA8 658 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms