RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 EPB41L4AQ9HCS5 686 aaPredicted RBP18.35■□□□□ 0.53
SNRPA1-213ENST00000560856 GINM1Q9NU53 330 aa18.35■□□□□ 0.53
SNRPA1-213ENST00000560856 USP17L5A8MUK1 530 aa18.34■□□□□ 0.53
SNRPA1-213ENST00000560856 GPR25O00155 361 aa18.34■□□□□ 0.53
SNRPA1-213ENST00000560856 GDF11O95390 407 aa18.34■□□□□ 0.53
SNRPA1-213ENST00000560856 ASNSP08243 561 aa18.34■□□□□ 0.53
SNRPA1-213ENST00000560856 CRHR2Q13324 411 aa18.34■□□□□ 0.53
SNRPA1-213ENST00000560856 DYNLL2Q96FJ2 89 aa18.34■□□□□ 0.53
SNRPA1-213ENST00000560856 TRIM34Q9BYJ4 488 aa18.34■□□□□ 0.53
SNRPA1-213ENST00000560856 ZCCHC17Q9NP64 241 aaKnown RBP18.34■□□□□ 0.53
SNRPA1-213ENST00000560856 ZBTB21Q9ULJ3 1066 aa18.34■□□□□ 0.53
SNRPA1-213ENST00000560856 FOXP2O15409 715 aa18.33■□□□□ 0.52
SNRPA1-213ENST00000560856 SPP2Q13103 211 aa18.33■□□□□ 0.52
SNRPA1-213ENST00000560856 SBK1Q52WX2 424 aa18.33■□□□□ 0.52
SNRPA1-213ENST00000560856 ANKRD23Q86SG2 305 aa18.33■□□□□ 0.52
SNRPA1-213ENST00000560856 SLC44A5Q8NCS7 719 aa18.33■□□□□ 0.52
SNRPA1-213ENST00000560856 ZNF280CQ8ND82 737 aa18.33■□□□□ 0.52
SNRPA1-213ENST00000560856 WDR18Q9BV38 432 aa18.33■□□□□ 0.52
SNRPA1-213ENST00000560856 TAOK2Q9UL54 1235 aa18.33■□□□□ 0.52
SNRPA1-213ENST00000560856 PTPRFP10586 1907 aa18.33■□□□□ 0.52
SNRPA1-213ENST00000560856 ATAD5Q96QE3 1844 aa18.33■□□□□ 0.52
SNRPA1-213ENST00000560856 TRIM75PA6NK02 468 aa18.32■□□□□ 0.52
SNRPA1-213ENST00000560856 PATL2C9JE40 543 aaKnown RBP18.32■□□□□ 0.52
SNRPA1-213ENST00000560856 GH2P01242 217 aa18.32■□□□□ 0.52
SNRPA1-213ENST00000560856 GNAT2P19087 354 aa18.32■□□□□ 0.52
SNRPA1-213ENST00000560856 GUCY1A2P33402 732 aa18.32■□□□□ 0.52
SNRPA1-213ENST00000560856 CERKLQ49MI3 558 aaPredicted RBP18.32■□□□□ 0.52
SNRPA1-213ENST00000560856 CCDC129Q6ZRS4 1044 aa18.32■□□□□ 0.52
SNRPA1-213ENST00000560856 ZNF296Q8WUU4 475 aaPredicted RBP18.32■□□□□ 0.52
SNRPA1-213ENST00000560856 FAM227BQ96M60 508 aa18.32■□□□□ 0.52
SNRPA1-213ENST00000560856 TBC1D2Q9BYX2 928 aa18.32■□□□□ 0.52
SNRPA1-213ENST00000560856 A0A0D9SFI3 127 aa18.31■□□□□ 0.52
SNRPA1-213ENST00000560856 TRIM6-TRIM34B2RNG4 842 aa18.31■□□□□ 0.52
SNRPA1-213ENST00000560856 SH3D19Q5HYK7 790 aa18.31■□□□□ 0.52
SNRPA1-213ENST00000560856 RILPL2Q969X0 211 aa18.31■□□□□ 0.52
SNRPA1-213ENST00000560856 HELLSQ9NRZ9 838 aa18.31■□□□□ 0.52
SNRPA1-213ENST00000560856 GSPT1P15170 499 aaKnown RBP18.3■□□□□ 0.52
SNRPA1-213ENST00000560856 CDK8P49336 464 aa18.3■□□□□ 0.52
SNRPA1-213ENST00000560856 TAF1CQ15572 869 aaPredicted RBP18.3■□□□□ 0.52
SNRPA1-213ENST00000560856 C16orf86Q6ZW13 317 aa18.3■□□□□ 0.52
SNRPA1-213ENST00000560856 FASTKD5Q7L8L6 764 aaKnown RBP18.3■□□□□ 0.52
SNRPA1-213ENST00000560856 IFNL3Q8IZI9 196 aa18.3■□□□□ 0.52
SNRPA1-213ENST00000560856 DDRGK1Q96HY6 314 aa18.3■□□□□ 0.52
SNRPA1-213ENST00000560856 ARPP21Q9UBL0 812 aaPredicted RBP18.3■□□□□ 0.52
SNRPA1-213ENST00000560856 SWAP70Q9UH65 585 aa18.3■□□□□ 0.52
SNRPA1-213ENST00000560856 ADGRA2Q96PE1 1338 aa18.29■□□□□ 0.52
SNRPA1-213ENST00000560856 PDHXO00330 501 aa18.29■□□□□ 0.52
SNRPA1-213ENST00000560856 SDSP20132 328 aa18.29■□□□□ 0.52
SNRPA1-213ENST00000560856 NMIQ13287 307 aaPredicted RBP18.29■□□□□ 0.52
SNRPA1-213ENST00000560856 ABCB5Q2M3G0 1257 aa18.29■□□□□ 0.52
SNRPA1-213ENST00000560856 TTC22Q5TAA0 569 aa18.29■□□□□ 0.52
SNRPA1-213ENST00000560856 AS3MTQ9HBK9 375 aa18.29■□□□□ 0.52
SNRPA1-213ENST00000560856 ZFYVE28Q9HCC9 887 aa18.29■□□□□ 0.52
SNRPA1-213ENST00000560856 FKTNO75072 461 aa18.28■□□□□ 0.52
SNRPA1-213ENST00000560856 BACE1P56817 501 aa18.28■□□□□ 0.52
SNRPA1-213ENST00000560856 CAP1Q01518 475 aa18.28■□□□□ 0.52
SNRPA1-213ENST00000560856 DGKZQ13574 1117 aa18.28■□□□□ 0.52
SNRPA1-213ENST00000560856 MCMDC2Q4G0Z9 681 aa18.28■□□□□ 0.52
SNRPA1-213ENST00000560856 VPS53Q5VIR6 699 aa18.28■□□□□ 0.52
SNRPA1-213ENST00000560856 GADL1Q6ZQY3 521 aa18.28■□□□□ 0.52
SNRPA1-213ENST00000560856 ZNF589Q86UQ0 364 aaPredicted RBP18.28■□□□□ 0.52
SNRPA1-213ENST00000560856 PROCA1Q8NCQ7 364 aaPredicted RBP18.28■□□□□ 0.52
SNRPA1-213ENST00000560856 ROBO3Q96MS0 1386 aa18.28■□□□□ 0.52
SNRPA1-213ENST00000560856 TLR2O60603 784 aa18.27■□□□□ 0.52
SNRPA1-213ENST00000560856 AKR1B1P15121 316 aa18.27■□□□□ 0.52
SNRPA1-213ENST00000560856 HMGCS2P54868 508 aa18.27■□□□□ 0.52
SNRPA1-213ENST00000560856 SEPT2Q15019 361 aa18.27■□□□□ 0.52
SNRPA1-213ENST00000560856 TREML2Q5T2D2 321 aa18.27■□□□□ 0.52
SNRPA1-213ENST00000560856 CENPQQ7L2Z9 268 aaPredicted RBP18.27■□□□□ 0.52
SNRPA1-213ENST00000560856 AMOTL1Q8IY63 956 aa18.27■□□□□ 0.52
SNRPA1-213ENST00000560856 TNS4Q8IZW8 715 aa18.27■□□□□ 0.52
SNRPA1-213ENST00000560856 AGTPBP1Q9UPW5 1226 aa18.27■□□□□ 0.52
SNRPA1-213ENST00000560856 SLC45A1Q9Y2W3 748 aa18.27■□□□□ 0.52
SNRPA1-213ENST00000560856 MINDY4BA8MYZ0 360 aa18.26■□□□□ 0.51
SNRPA1-213ENST00000560856 USP17L10C9JJH3 530 aa18.26■□□□□ 0.51
SNRPA1-213ENST00000560856 APPP05067 770 aa18.26■□□□□ 0.51
SNRPA1-213ENST00000560856 TDO2P48775 406 aa18.26■□□□□ 0.51
SNRPA1-213ENST00000560856 MTMR2Q13614 643 aa18.26■□□□□ 0.51
SNRPA1-213ENST00000560856 ALX1Q15699 326 aa18.26■□□□□ 0.51
SNRPA1-213ENST00000560856 C17orf99Q6UX52 265 aa18.26■□□□□ 0.51
SNRPA1-213ENST00000560856 SIAH1Q8IUQ4 282 aa18.26■□□□□ 0.51
SNRPA1-213ENST00000560856 ACER1Q8TDN7 264 aa18.26■□□□□ 0.51
SNRPA1-213ENST00000560856 CCDC17Q96LX7 622 aa18.26■□□□□ 0.51
SNRPA1-213ENST00000560856 CABP5Q9NP86 173 aa18.26■□□□□ 0.51
SNRPA1-213ENST00000560856 EMILIN3Q9NT22 766 aa18.26■□□□□ 0.51
SNRPA1-213ENST00000560856 C19orf81C9J6K1 198 aa18.25■□□□□ 0.51
SNRPA1-213ENST00000560856 CYP2C8P10632 490 aa18.25■□□□□ 0.51
SNRPA1-213ENST00000560856 RASA1P20936 1047 aa18.25■□□□□ 0.51
SNRPA1-213ENST00000560856 RAB3GAP1Q15042 981 aa18.25■□□□□ 0.51
SNRPA1-213ENST00000560856 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.25■□□□□ 0.51
SNRPA1-213ENST00000560856 NACAP1Q9BZK3 213 aa18.25■□□□□ 0.51
SNRPA1-213ENST00000560856 LOC285556D6RIA3 1793 aa18.25■□□□□ 0.51
SNRPA1-213ENST00000560856 A0A1W2PRG0 241 aa18.24■□□□□ 0.51
SNRPA1-213ENST00000560856 SP3Q02447 781 aa18.24■□□□□ 0.51
SNRPA1-213ENST00000560856 TMEM179Q6ZVK1 233 aa18.24■□□□□ 0.51
SNRPA1-213ENST00000560856 CTU1Q7Z7A3 348 aaKnown RBP18.24■□□□□ 0.51
SNRPA1-213ENST00000560856 SKAP1Q86WV1 359 aa18.24■□□□□ 0.51
SNRPA1-213ENST00000560856 KIAA1683Q9H0B3 1180 aa18.24■□□□□ 0.51
SNRPA1-213ENST00000560856 NAPBQ9H115 298 aa18.24■□□□□ 0.51
SNRPA1-213ENST00000560856 CCDC171Q6TFL3 1326 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms