RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 FMNL1O95466 1100 aaPredicted RBP18.35■□□□□ 0.53
SNRPA1-210ENST00000560383 EN2P19622 333 aaPredicted RBP18.35■□□□□ 0.53
SNRPA1-210ENST00000560383 FCGRTP55899 365 aa18.35■□□□□ 0.53
SNRPA1-210ENST00000560383 SH3TC2Q8TF17 1288 aa18.35■□□□□ 0.53
SNRPA1-210ENST00000560383 DNAJC18Q9H819 358 aa18.35■□□□□ 0.53
SNRPA1-210ENST00000560383 PNMA3Q9UL41 463 aa18.35■□□□□ 0.53
SNRPA1-210ENST00000560383 MYPNQ86TC9 1320 aa18.34■□□□□ 0.53
SNRPA1-210ENST00000560383 SALL3Q9BXA9 1300 aa18.34■□□□□ 0.53
SNRPA1-210ENST00000560383 USP5P45974 858 aa18.34■□□□□ 0.53
SNRPA1-210ENST00000560383 RRP1BQ14684 758 aaKnown RBP18.34■□□□□ 0.53
SNRPA1-210ENST00000560383 ZNF280CQ8ND82 737 aa18.34■□□□□ 0.53
SNRPA1-210ENST00000560383 EHD4Q9H223 541 aa18.34■□□□□ 0.53
SNRPA1-210ENST00000560383 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.34■□□□□ 0.53
SNRPA1-210ENST00000560383 SUPT16HQ9Y5B9 1047 aaKnown RBP18.34■□□□□ 0.53
SNRPA1-210ENST00000560383 MYH1P12882 1939 aa18.33■□□□□ 0.53
SNRPA1-210ENST00000560383 HLA-DOAP06340 250 aa18.33■□□□□ 0.52
SNRPA1-210ENST00000560383 GRK4P32298 578 aa18.33■□□□□ 0.52
SNRPA1-210ENST00000560383 SLC4A8Q2Y0W8 1093 aa18.33■□□□□ 0.52
SNRPA1-210ENST00000560383 TSHZ3Q63HK5 1081 aa18.33■□□□□ 0.52
SNRPA1-210ENST00000560383 ZSCAN25Q6NSZ9 544 aa18.33■□□□□ 0.52
SNRPA1-210ENST00000560383 EXOC6Q8TAG9 804 aa18.33■□□□□ 0.52
SNRPA1-210ENST00000560383 PI4K2BQ8TCG2 481 aa18.33■□□□□ 0.52
SNRPA1-210ENST00000560383 RAET1EQ8TD07 263 aa18.33■□□□□ 0.52
SNRPA1-210ENST00000560383 OTUD7AQ8TE49 926 aaPredicted RBP18.33■□□□□ 0.52
SNRPA1-210ENST00000560383 SMCR8Q8TEV9 937 aaPredicted RBP18.33■□□□□ 0.52
SNRPA1-210ENST00000560383 CRNKL1Q9BZJ0 848 aaKnown RBP18.33■□□□□ 0.52
SNRPA1-210ENST00000560383 GINM1Q9NU53 330 aa18.33■□□□□ 0.52
SNRPA1-210ENST00000560383 SAP30BPQ9UHR5 308 aaKnown RBP18.33■□□□□ 0.52
SNRPA1-210ENST00000560383 DDX60LQ5H9U9 1706 aaKnown RBP18.32■□□□□ 0.52
SNRPA1-210ENST00000560383 USP17L5A8MUK1 530 aa18.32■□□□□ 0.52
SNRPA1-210ENST00000560383 ASNSP08243 561 aa18.32■□□□□ 0.52
SNRPA1-210ENST00000560383 PABPC4Q13310 644 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNRPA1-210ENST00000560383 SH3D19Q5HYK7 790 aa18.32■□□□□ 0.52
SNRPA1-210ENST00000560383 CCDC84Q86UT8 332 aaPredicted RBP18.32■□□□□ 0.52
SNRPA1-210ENST00000560383 LCORLQ8N3X6 602 aa18.32■□□□□ 0.52
SNRPA1-210ENST00000560383 KBTBD3Q8NAB2 608 aa18.32■□□□□ 0.52
SNRPA1-210ENST00000560383 AS3MTQ9HBK9 375 aa18.32■□□□□ 0.52
SNRPA1-210ENST00000560383 ERC2O15083 957 aa18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 GLRX3O76003 335 aaKnown RBP18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 PRKCZQ05513 592 aa18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 SPP2Q13103 211 aa18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 FAM110CQ1W6H9 321 aa18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 SLFNL1Q499Z3 407 aa18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 TREML2Q5T2D2 321 aa18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 ANKRD45Q5TZF3 282 aa18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 TTC6Q86TZ1 520 aa18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 SMC5Q8IY18 1101 aa18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 CRACR2BQ8N4Y2 399 aaPredicted RBP18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 SLAIN1Q8ND83 568 aa18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 WDR18Q9BV38 432 aa18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 RWDD1Q9H446 243 aaPredicted RBP18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 SERPINB13Q9UIV8 391 aa18.31■□□□□ 0.52
SNRPA1-210ENST00000560383 CHGBP05060 677 aa18.3■□□□□ 0.52
SNRPA1-210ENST00000560383 MX1P20591 662 aa18.3■□□□□ 0.52
SNRPA1-210ENST00000560383 TATDN1Q6P1N9 297 aa18.3■□□□□ 0.52
SNRPA1-210ENST00000560383 ARMT1Q9H993 441 aa18.3■□□□□ 0.52
SNRPA1-210ENST00000560383 DCP1AQ9NPI6 582 aaPredicted RBP18.3■□□□□ 0.52
SNRPA1-210ENST00000560383 MBD4O95243 580 aa18.29■□□□□ 0.52
SNRPA1-210ENST00000560383 GCLCP48506 637 aaPredicted RBP18.29■□□□□ 0.52
SNRPA1-210ENST00000560383 HMGCS2P54868 508 aa18.29■□□□□ 0.52
SNRPA1-210ENST00000560383 JAG1P78504 1218 aa18.29■□□□□ 0.52
SNRPA1-210ENST00000560383 IRF5Q13568 498 aa18.29■□□□□ 0.52
SNRPA1-210ENST00000560383 NKX2-3Q8TAU0 364 aa18.29■□□□□ 0.52
SNRPA1-210ENST00000560383 TRIM34Q9BYJ4 488 aa18.29■□□□□ 0.52
SNRPA1-210ENST00000560383 ATP8A2Q9NTI2 1148 aa18.29■□□□□ 0.52
SNRPA1-210ENST00000560383 STAP2Q9UGK3 403 aa18.29■□□□□ 0.52
SNRPA1-210ENST00000560383 TAOK2Q9UL54 1235 aa18.29■□□□□ 0.52
SNRPA1-210ENST00000560383 TNPO2O14787 897 aaKnown RBP18.28■□□□□ 0.52
SNRPA1-210ENST00000560383 ECM2O94769 699 aaPredicted RBP18.28■□□□□ 0.52
SNRPA1-210ENST00000560383 ZFYP08048 801 aaPredicted RBP18.28■□□□□ 0.52
SNRPA1-210ENST00000560383 PLCD1P51178 756 aa18.28■□□□□ 0.52
SNRPA1-210ENST00000560383 UBXN2AP68543 259 aa18.28■□□□□ 0.52
SNRPA1-210ENST00000560383 GABPAQ06546 454 aa18.28■□□□□ 0.52
SNRPA1-210ENST00000560383 PXYLP1Q8TE99 480 aa18.28■□□□□ 0.52
SNRPA1-210ENST00000560383 SDR42E1Q8WUS8 393 aa18.28■□□□□ 0.52
SNRPA1-210ENST00000560383 PUS7LQ9H0K6 701 aaKnown RBP18.28■□□□□ 0.52
SNRPA1-210ENST00000560383 ZBTB47Q9UFB7 747 aaPredicted RBP18.28■□□□□ 0.52
SNRPA1-210ENST00000560383 NAV1Q8NEY1 1877 aa18.28■□□□□ 0.52
SNRPA1-210ENST00000560383 PRKAB2O43741 272 aa18.27■□□□□ 0.52
SNRPA1-210ENST00000560383 IGHDP01880 384 aa18.27■□□□□ 0.52
SNRPA1-210ENST00000560383 BACE1P56817 501 aa18.27■□□□□ 0.52
SNRPA1-210ENST00000560383 MTFR1Q15390 333 aa18.27■□□□□ 0.52
SNRPA1-210ENST00000560383 ANKRD13CQ8N6S4 541 aa18.27■□□□□ 0.52
SNRPA1-210ENST00000560383 APPBP2Q92624 585 aa18.27■□□□□ 0.52
SNRPA1-210ENST00000560383 MCM9Q9NXL9 1143 aa18.27■□□□□ 0.52
SNRPA1-210ENST00000560383 GABRQQ9UN88 632 aa18.27■□□□□ 0.52
SNRPA1-210ENST00000560383 C19orf81C9J6K1 198 aa18.26■□□□□ 0.51
SNRPA1-210ENST00000560383 RNF113AO15541 343 aaKnown RBP18.26■□□□□ 0.51
SNRPA1-210ENST00000560383 MYCP01106 439 aaPredicted RBP18.26■□□□□ 0.51
SNRPA1-210ENST00000560383 POLR3DP05423 398 aaPredicted RBP18.26■□□□□ 0.51
SNRPA1-210ENST00000560383 GJB1P08034 283 aa18.26■□□□□ 0.51
SNRPA1-210ENST00000560383 CAPN2P17655 700 aa18.26■□□□□ 0.51
SNRPA1-210ENST00000560383 GJA8P48165 433 aa18.26■□□□□ 0.51
SNRPA1-210ENST00000560383 FLT3LGP49771 235 aa18.26■□□□□ 0.51
SNRPA1-210ENST00000560383 MTMR2Q13614 643 aa18.26■□□□□ 0.51
SNRPA1-210ENST00000560383 SHISA4Q96DD7 197 aa18.26■□□□□ 0.51
SNRPA1-210ENST00000560383 ASCC2Q9H1I8 757 aaPredicted RBP18.26■□□□□ 0.51
SNRPA1-210ENST00000560383 ZBTB21Q9ULJ3 1066 aa18.26■□□□□ 0.51
SNRPA1-210ENST00000560383 DOCK3Q8IZD9 2030 aa18.26■□□□□ 0.51
SNRPA1-210ENST00000560383 ADCY3O60266 1144 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms