RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 LMOD3Q0VAK6 560 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 APOBEC3FQ8IUX4 373 aaKnown RBP7.05□□□□□ -1.28
LRRC28-208ENST00000558771 ANKRD18AQ8IVF6 992 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 PHTF2Q8N3S3 785 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 OGFOD1Q8N543 542 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 JARID2Q92833 1246 aaPredicted RBP7.05□□□□□ -1.28
LRRC28-208ENST00000558771 ERO1AQ96HE7 468 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 WNK4Q96J92 1243 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 EFCC1Q9HA90 598 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 NXF1Q9UBU9 619 aaKnown RBP7.05□□□□□ -1.28
LRRC28-208ENST00000558771 LAS1LQ9Y4W2 734 aaKnown RBP7.05□□□□□ -1.28
LRRC28-208ENST00000558771 PCDHB11Q9Y5F2 797 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 MED23Q9ULK4 1368 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 LAMB1P07942 1786 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 MYO3BQ8WXR4 1341 aa7.04□□□□□ -1.28
LRRC28-208ENST00000558771 FIGNL2A6NMB9 653 aa7.04□□□□□ -1.28
LRRC28-208ENST00000558771 PCCAP05165 728 aaPredicted RBP7.04□□□□□ -1.28
LRRC28-208ENST00000558771 HOXB7P09629 217 aa7.04□□□□□ -1.28
LRRC28-208ENST00000558771 ZBTB48P10074 688 aaPredicted RBP7.04□□□□□ -1.28
LRRC28-208ENST00000558771 NFX1Q12986 1120 aaKnown RBP7.04□□□□□ -1.28
LRRC28-208ENST00000558771 CRHR2Q13324 411 aa7.04□□□□□ -1.28
LRRC28-208ENST00000558771 MAP3K11Q16584 847 aa7.04□□□□□ -1.28
LRRC28-208ENST00000558771 TSGA10IPQ3SY00 556 aa7.04□□□□□ -1.28
LRRC28-208ENST00000558771 STRIP1Q5VSL9 837 aa7.04□□□□□ -1.28
LRRC28-208ENST00000558771 TXNRD3Q86VQ6 643 aa7.04□□□□□ -1.28
LRRC28-208ENST00000558771 ZBED3Q96IU2 234 aaPredicted RBP7.04□□□□□ -1.28
LRRC28-208ENST00000558771 CLMNQ96JQ2 1002 aa7.04□□□□□ -1.28
LRRC28-208ENST00000558771 MYD88Q99836 296 aa7.04□□□□□ -1.28
LRRC28-208ENST00000558771 HYPKQ9NX55 129 aa7.04□□□□□ -1.28
LRRC28-208ENST00000558771 A0A0C4DFX4 3053 aa7.04□□□□□ -1.28
LRRC28-208ENST00000558771 SSC5DA1L4H1 1573 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 WFS1O76024 890 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 SOX11P35716 441 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 CTSOP43234 321 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-208ENST00000558771 SCTRP47872 440 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 MMP14P50281 582 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 CCT4P50991 539 aaKnown RBP7.03□□□□□ -1.28
LRRC28-208ENST00000558771 SP3Q02447 781 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 SEMA3FQ13275 785 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 SLFNL1Q499Z3 407 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 LCE2AQ5TA79 106 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-208ENST00000558771 DUSP27Q5VZP5 1158 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 TTLL5Q6EMB2 1281 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 KIAA0825Q8IV33 1275 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 WWC1Q8IX03 1113 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 CCDC191Q8NCU4 936 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 ZNF333Q96JL9 665 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 INSM2Q96T92 566 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-208ENST00000558771 CDC5LQ99459 802 aaKnown RBP7.03□□□□□ -1.28
LRRC28-208ENST00000558771 COA1Q9GZY4 146 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 DEFB129Q9H1M3 183 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 PHAXQ9H814 394 aaKnown RBP7.03□□□□□ -1.28
LRRC28-208ENST00000558771 DNMT3LQ9UJW3 386 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 MINPP1Q9UNW1 487 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 SPEF2Q9C093 1822 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 COL1A1P02452 1464 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-208ENST00000558771 COL6A3P12111 3177 aa7.03□□□□□ -1.28
LRRC28-208ENST00000558771 H0YGN5 161 aa7.02□□□□□ -1.29
LRRC28-208ENST00000558771 PPP1R12BO60237 982 aaPredicted RBP7.02□□□□□ -1.29
LRRC28-208ENST00000558771 OTUD7BQ6GQQ9 843 aa7.02□□□□□ -1.29
LRRC28-208ENST00000558771 NPAS3Q8IXF0 933 aa7.02□□□□□ -1.29
LRRC28-208ENST00000558771 CCDC146Q8IYE0 955 aa7.02□□□□□ -1.29
LRRC28-208ENST00000558771 PTPN18Q99952 460 aa7.02□□□□□ -1.29
LRRC28-208ENST00000558771 GREM2Q9H772 168 aa7.02□□□□□ -1.29
LRRC28-208ENST00000558771 POLMQ9NP87 494 aaPredicted RBP7.02□□□□□ -1.29
LRRC28-208ENST00000558771 BSDC1Q9NW68 430 aaPredicted RBP7.02□□□□□ -1.29
LRRC28-208ENST00000558771 CWC25Q9NXE8 425 aaPredicted RBP7.02□□□□□ -1.29
LRRC28-208ENST00000558771 PCDHAC2Q9Y5I4 1007 aa7.02□□□□□ -1.29
LRRC28-208ENST00000558771 ECM29Q5VYK3 1845 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 UNCXA6NJT0 531 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 MYCP01106 439 aaPredicted RBP7.01□□□□□ -1.29
LRRC28-208ENST00000558771 KLRK1P26718 216 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 CTSWP56202 376 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 GTF2IP78347 998 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 DLGAP5Q15398 846 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.01□□□□□ -1.29
LRRC28-208ENST00000558771 SLC4A8Q2Y0W8 1093 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 SLC9C1Q4G0N8 1177 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 NBPF12Q5TAG4 269 aaPredicted RBP7.01□□□□□ -1.29
LRRC28-208ENST00000558771 NBPF11Q86T75 865 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 RNF135Q8IUD6 432 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 TTLL11Q8NHH1 800 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 METTL22Q9BUU2 404 aaPredicted RBP7.01□□□□□ -1.29
LRRC28-208ENST00000558771 OSBPL3Q9H4L5 887 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 ALG2Q9H553 416 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 LEMD3Q9Y2U8 911 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 PPP2R3BQ9Y5P8 575 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 PTCH2Q9Y6C5 1203 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 MYH3P11055 1940 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 ZNF804BA4D1E1 1349 aa7.01□□□□□ -1.29
LRRC28-208ENST00000558771 CLRN2A0PK11 232 aa7□□□□□ -1.29
LRRC28-208ENST00000558771 DLL1O00548 723 aa7□□□□□ -1.29
LRRC28-208ENST00000558771 TRAK2O60296 914 aa7□□□□□ -1.29
LRRC28-208ENST00000558771 USP2O75604 605 aaPredicted RBP7□□□□□ -1.29
LRRC28-208ENST00000558771 IREB2P48200 963 aaKnown RBP7□□□□□ -1.29
LRRC28-208ENST00000558771 SUPT20HL1Q3ZLR7 823 aa7□□□□□ -1.29
LRRC28-208ENST00000558771 ANKRD13AQ8IZ07 590 aa7□□□□□ -1.29
LRRC28-208ENST00000558771 CERS5Q8N5B7 392 aa7□□□□□ -1.29
LRRC28-208ENST00000558771 MBIPQ9NS73 344 aa7□□□□□ -1.29
LRRC28-208ENST00000558771 OTOFQ9HC10 1997 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms