RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 MARCKSP29966 332 aaPredicted RBP15.15■□□□□ 0.02
CPNE6-204ENST00000557829 MCAMP43121 646 aa15.15■□□□□ 0.02
CPNE6-204ENST00000557829 KRBA2Q6ZNG9 492 aa15.15■□□□□ 0.02
CPNE6-204ENST00000557829 CYB5R4Q7L1T6 521 aa15.15■□□□□ 0.02
CPNE6-204ENST00000557829 NLGN1Q8N2Q7 840 aa15.15■□□□□ 0.02
CPNE6-204ENST00000557829 IGDCC4Q8TDY8 1250 aa15.15■□□□□ 0.02
CPNE6-204ENST00000557829 CDC5LQ99459 802 aaKnown RBP15.15■□□□□ 0.02
CPNE6-204ENST00000557829 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.15■□□□□ 0.02
CPNE6-204ENST00000557829 GJB4Q9NTQ9 266 aa15.15■□□□□ 0.02
CPNE6-204ENST00000557829 GOLGA6L9A6NEM1 432 aa15.14■□□□□ 0.01
CPNE6-204ENST00000557829 ZBTB43O43298 467 aa15.14■□□□□ 0.01
CPNE6-204ENST00000557829 PDE8BO95263 885 aa15.14■□□□□ 0.01
CPNE6-204ENST00000557829 SERPINC1P01008 464 aa15.14■□□□□ 0.01
CPNE6-204ENST00000557829 TPM1P09493 284 aa15.14■□□□□ 0.01
CPNE6-204ENST00000557829 IARSP41252 1262 aaKnown RBP15.14■□□□□ 0.01
CPNE6-204ENST00000557829 GNL2Q13823 731 aaKnown RBP15.14■□□□□ 0.01
CPNE6-204ENST00000557829 TBC1D10CQ8IV04 446 aa15.14■□□□□ 0.01
CPNE6-204ENST00000557829 ANKRD18AQ8IVF6 992 aa15.14■□□□□ 0.01
CPNE6-204ENST00000557829 MROH5Q6ZUA9 1318 aa15.14■□□□□ 0.01
CPNE6-204ENST00000557829 UQCRFS1P1P0C7P4 283 aa15.14■□□□□ 0.01
CPNE6-204ENST00000557829 TERF2Q15554 542 aa15.14■□□□□ 0.01
CPNE6-204ENST00000557829 QSER1Q2KHR3 1735 aa15.13■□□□□ 0.01
CPNE6-204ENST00000557829 DOCK2Q92608 1830 aa15.13■□□□□ 0.01
CPNE6-204ENST00000557829 TIAM2Q8IVF5 1701 aa15.13■□□□□ 0.01
CPNE6-204ENST00000557829 ARHGAP6O43182 974 aa15.13■□□□□ 0.01
CPNE6-204ENST00000557829 ATP1A3P13637 1013 aa15.13■□□□□ 0.01
CPNE6-204ENST00000557829 SLC9C2Q5TAH2 1124 aa15.13■□□□□ 0.01
CPNE6-204ENST00000557829 TRIM65Q6PJ69 517 aa15.13■□□□□ 0.01
CPNE6-204ENST00000557829 ZNF771Q7L3S4 317 aaPredicted RBP15.13■□□□□ 0.01
CPNE6-204ENST00000557829 HOMER1Q86YM7 354 aa15.13■□□□□ 0.01
CPNE6-204ENST00000557829 MTA3Q9BTC8 594 aa15.13■□□□□ 0.01
CPNE6-204ENST00000557829 KCNH3Q9ULD8 1083 aa15.13■□□□□ 0.01
CPNE6-204ENST00000557829 CCDC66A2RUB6 948 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 ZBTB7AO95365 584 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 MMP10P09238 476 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 TOP1P11387 765 aaKnown RBP15.12■□□□□ 0.01
CPNE6-204ENST00000557829 ARID4AP29374 1257 aaPredicted RBP15.12■□□□□ 0.01
CPNE6-204ENST00000557829 CDC27P30260 824 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 ST5P78524 1137 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 CHRNDQ07001 517 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 SLC51AQ86UW1 340 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 METTL16Q86W50 562 aaKnown RBP15.12■□□□□ 0.01
CPNE6-204ENST00000557829 RAB11FIP4Q86YS3 637 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 REXO1L1PQ8IX06 675 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 KRI1Q8N9T8 703 aaKnown RBP15.12■□□□□ 0.01
CPNE6-204ENST00000557829 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.12■□□□□ 0.01
CPNE6-204ENST00000557829 DACH1Q9UI36 760 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 V9GYY5 206 aaPredicted RBP15.12■□□□□ 0.01
CPNE6-204ENST00000557829 ATP8B1O43520 1251 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 FMNL1O95466 1100 aaPredicted RBP15.12■□□□□ 0.01
CPNE6-204ENST00000557829 FGFR2P21802 821 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 MDM2Q00987 491 aaPredicted RBP15.12■□□□□ 0.01
CPNE6-204ENST00000557829 SSRP1Q08945 709 aaKnown RBP15.12■□□□□ 0.01
CPNE6-204ENST00000557829 TBX2Q13207 712 aaPredicted RBP15.12■□□□□ 0.01
CPNE6-204ENST00000557829 PNOCQ13519 176 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 ERCC6LQ2NKX8 1250 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 CFAP100Q494V2 611 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 NT5DC1Q5TFE4 455 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 PI16Q6UXB8 463 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 TRIML1Q8N9V2 468 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 CNNM3Q8NE01 707 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 CNNM2Q9H8M5 875 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 LY9Q9HBG7 655 aa15.12■□□□□ 0.01
CPNE6-204ENST00000557829 FAM217BQ9NTX9 383 aaPredicted RBP15.12■□□□□ 0.01
CPNE6-204ENST00000557829 BSDC1Q9NW68 430 aaPredicted RBP15.12■□□□□ 0.01
CPNE6-204ENST00000557829 TCRBV5S4A2TA0A5A2 114 aa15.11■□□□□ 0.01
CPNE6-204ENST00000557829 GOLGA8AA7E2F4 631 aa15.11■□□□□ 0.01
CPNE6-204ENST00000557829 RPS8P62241 208 aaKnown RBP15.11■□□□□ 0.01
CPNE6-204ENST00000557829 PUM3Q15397 648 aaKnown RBP15.11■□□□□ 0.01
CPNE6-204ENST00000557829 LONRF3Q496Y0 759 aa15.11■□□□□ 0.01
CPNE6-204ENST00000557829 CT47A1Q5JQC4 288 aaPredicted RBP15.11■□□□□ 0.01
CPNE6-204ENST00000557829 ZNF579Q8NAF0 562 aaKnown RBP15.11■□□□□ 0.01
CPNE6-204ENST00000557829 MLKLQ8NB16 471 aa15.11■□□□□ 0.01
CPNE6-204ENST00000557829 DPF2Q92785 391 aa15.11■□□□□ 0.01
CPNE6-204ENST00000557829 AIFM3Q96NN9 605 aa15.11■□□□□ 0.01
CPNE6-204ENST00000557829 STRBPQ96SI9 672 aaKnown RBP15.11■□□□□ 0.01
CPNE6-204ENST00000557829 ARGLU1Q9NWB6 273 aaPredicted RBP15.11■□□□□ 0.01
CPNE6-204ENST00000557829 DNAI1Q9UI46 699 aa15.11■□□□□ 0.01
CPNE6-204ENST00000557829 WTIPA6NIX2 430 aaPredicted RBP15.11■□□□□ 0.01
CPNE6-204ENST00000557829 PATL2C9JE40 543 aaKnown RBP15.11■□□□□ 0.01
CPNE6-204ENST00000557829 IFNAR1P17181 557 aa15.11■□□□□ 0.01
CPNE6-204ENST00000557829 PIH1D3Q9NQM4 214 aaKnown RBP15.11■□□□□ 0.01
CPNE6-204ENST00000557829 ZNF446Q9NWS9 450 aa15.11■□□□□ 0.01
CPNE6-204ENST00000557829 MINPP1Q9UNW1 487 aa15.11■□□□□ 0.01
CPNE6-204ENST00000557829 PCDHA5Q9Y5H7 936 aa15.11■□□□□ 0.01
CPNE6-204ENST00000557829 ZNF532Q9HCE3 1301 aa15.11■□□□□ 0.01
CPNE6-204ENST00000557829 MYH13Q9UKX3 1938 aa15.1■□□□□ 0.01
CPNE6-204ENST00000557829 EFCAB8A8MWE9 144 aa15.1■□□□□ 0.01
CPNE6-204ENST00000557829 B4E1Z4 1266 aa15.1■□□□□ 0.01
CPNE6-204ENST00000557829 STX10O60499 249 aa15.1■□□□□ 0.01
CPNE6-204ENST00000557829 PDE6AP16499 860 aa15.1■□□□□ 0.01
CPNE6-204ENST00000557829 RCAN1P53805 252 aa15.1■□□□□ 0.01
CPNE6-204ENST00000557829 SAFBQ15424 915 aaKnown RBP eCLIP15.1■□□□□ 0.01
CPNE6-204ENST00000557829 CRY2Q49AN0 593 aa15.1■□□□□ 0.01
CPNE6-204ENST00000557829 TMEM67Q5HYA8 995 aa15.1■□□□□ 0.01
CPNE6-204ENST00000557829 KANK3Q6NY19 840 aa15.1■□□□□ 0.01
CPNE6-204ENST00000557829 NFXL1Q6ZNB6 911 aa15.1■□□□□ 0.01
CPNE6-204ENST00000557829 FOXP4Q8IVH2 680 aaPredicted RBP15.1■□□□□ 0.01
CPNE6-204ENST00000557829 ENOX1Q8TC92 643 aaKnown RBP15.1■□□□□ 0.01
CPNE6-204ENST00000557829 UBXN4Q92575 508 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms