RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 AATFQ9NY61 560 aaKnown RBP eCLIP17.05■□□□□ 0.32
SPTLC2-202ENST00000554365 HERC5Q9UII4 1024 aaKnown RBP17.05■□□□□ 0.32
SPTLC2-202ENST00000554365 ATAD5Q96QE3 1844 aa17.05■□□□□ 0.32
SPTLC2-202ENST00000554365 HMGCRP04035 888 aa17.04■□□□□ 0.32
SPTLC2-202ENST00000554365 IRX3P78415 501 aaPredicted RBP17.04■□□□□ 0.32
SPTLC2-202ENST00000554365 MTMR2Q13614 643 aa17.04■□□□□ 0.32
SPTLC2-202ENST00000554365 SH3D19Q5HYK7 790 aa17.04■□□□□ 0.32
SPTLC2-202ENST00000554365 NAA16Q6N069 864 aaPredicted RBP17.04■□□□□ 0.32
SPTLC2-202ENST00000554365 NECAB2Q7Z6G3 386 aa17.04■□□□□ 0.32
SPTLC2-202ENST00000554365 DIS3LQ8TF46 1054 aaKnown RBP17.04■□□□□ 0.32
SPTLC2-202ENST00000554365 PI4KBQ9UBF8 816 aa17.04■□□□□ 0.32
SPTLC2-202ENST00000554365 STAP2Q9UGK3 403 aa17.04■□□□□ 0.32
SPTLC2-202ENST00000554365 BAG3O95817 575 aa17.03■□□□□ 0.32
SPTLC2-202ENST00000554365 NUCB1Q02818 461 aa17.03■□□□□ 0.32
SPTLC2-202ENST00000554365 TRIM32Q13049 653 aa17.03■□□□□ 0.32
SPTLC2-202ENST00000554365 TTC39AQ5SRH9 613 aa17.03■□□□□ 0.32
SPTLC2-202ENST00000554365 MAPKAPK5Q8IW41 473 aa17.03■□□□□ 0.32
SPTLC2-202ENST00000554365 TGFBRAP1Q8WUH2 860 aa17.03■□□□□ 0.32
SPTLC2-202ENST00000554365 TRIM34Q9BYJ4 488 aa17.03■□□□□ 0.32
SPTLC2-202ENST00000554365 HMX1Q9NP08 348 aaPredicted RBP17.03■□□□□ 0.32
SPTLC2-202ENST00000554365 TMOD4Q9NZQ9 345 aa17.03■□□□□ 0.32
SPTLC2-202ENST00000554365 GJD2Q9UKL4 321 aa17.03■□□□□ 0.32
SPTLC2-202ENST00000554365 RANBP2P49792 3224 aaKnown RBP17.03■□□□□ 0.32
SPTLC2-202ENST00000554365 RAB11FIP3O75154 756 aa17.02■□□□□ 0.32
SPTLC2-202ENST00000554365 CRACR2BQ8N4Y2 399 aaPredicted RBP17.02■□□□□ 0.32
SPTLC2-202ENST00000554365 DHX36Q9H2U1 1008 aaKnown RBP17.02■□□□□ 0.32
SPTLC2-202ENST00000554365 MORF4L1Q9UBU8 362 aa17.02■□□□□ 0.32
SPTLC2-202ENST00000554365 RPTORQ8N122 1335 aa17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 A0A1W2PPC1 479 aa17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 SMARCA5O60264 1052 aaPredicted RBP17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 ASNSP08243 561 aa17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 PLCG2P16885 1265 aa17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 BACE1P56817 501 aa17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 JAG1P78504 1218 aa17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 OS9Q13438 667 aaPredicted RBP17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 HSP90AB4PQ58FF6 505 aa17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 CCDC158Q5M9N0 1113 aa17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 SKAP1Q86WV1 359 aa17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 C7orf61Q8IZ16 206 aa17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 ANKLE1Q8NAG6 615 aa17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 RHPN1Q8TCX5 695 aa17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 WDR18Q9BV38 432 aa17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 DOCK3Q8IZD9 2030 aa17.01■□□□□ 0.31
SPTLC2-202ENST00000554365 FLT1P17948 1338 aa17■□□□□ 0.31
SPTLC2-202ENST00000554365 APBB1O00213 710 aa17■□□□□ 0.31
SPTLC2-202ENST00000554365 PEX10O60683 326 aa17■□□□□ 0.31
SPTLC2-202ENST00000554365 GDF11O95390 407 aa17■□□□□ 0.31
SPTLC2-202ENST00000554365 CYP2B6P20813 491 aa17■□□□□ 0.31
SPTLC2-202ENST00000554365 SHROOM1Q2M3G4 852 aaPredicted RBP17■□□□□ 0.31
SPTLC2-202ENST00000554365 TNNI3KQ59H18 835 aa17■□□□□ 0.31
SPTLC2-202ENST00000554365 ANKRD45Q5TZF3 282 aa17■□□□□ 0.31
SPTLC2-202ENST00000554365 ADGRA1Q86SQ6 560 aa17■□□□□ 0.31
SPTLC2-202ENST00000554365 TRIB2Q92519 343 aa17■□□□□ 0.31
SPTLC2-202ENST00000554365 KIF1BPQ96EK5 621 aa17■□□□□ 0.31
SPTLC2-202ENST00000554365 P2RX7Q99572 595 aaKnown RBP17■□□□□ 0.31
SPTLC2-202ENST00000554365 DBNDD2Q9BQY9 259 aa17■□□□□ 0.31
SPTLC2-202ENST00000554365 DNAJC18Q9H819 358 aa17■□□□□ 0.31
SPTLC2-202ENST00000554365 SAP30BPQ9UHR5 308 aaKnown RBP17■□□□□ 0.31
SPTLC2-202ENST00000554365 PALD1Q9ULE6 856 aa17■□□□□ 0.31
SPTLC2-202ENST00000554365 FPGT-TNNI3KV9GXZ4 949 aa17■□□□□ 0.31
SPTLC2-202ENST00000554365 SIPA1L1O43166 1804 aa16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 USP17L10C9JJH3 530 aa16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 SOX1O00570 391 aaPredicted RBP16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 CYP2E1P05181 493 aaPredicted RBP16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 PDE4AP27815 886 aa16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 HOXA7P31268 230 aaPredicted RBP16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 PPP4CP60510 307 aa16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 HERVK_113P62684 666 aa16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 CHD1LQ86WJ1 897 aa16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 ERC1Q8IUD2 1116 aa16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 FOXP4Q8IVH2 680 aaPredicted RBP16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 LRCH3Q96II8 777 aa16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 LRRCC1Q9C099 1032 aa16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 NBPF3Q9H094 633 aa16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 GPR108Q9NPR9 543 aa16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 ZMYND8Q9ULU4 1186 aaPredicted RBP16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 MAST2Q6P0Q8 1798 aa16.99■□□□□ 0.31
SPTLC2-202ENST00000554365 C19orf81C9J6K1 198 aa16.98■□□□□ 0.31
SPTLC2-202ENST00000554365 ZAP70P43403 619 aa16.98■□□□□ 0.31
SPTLC2-202ENST00000554365 CCAR1Q8IX12 1150 aaKnown RBP16.98■□□□□ 0.31
SPTLC2-202ENST00000554365 GPRC5AQ8NFJ5 357 aa16.98■□□□□ 0.31
SPTLC2-202ENST00000554365 NUDT12Q9BQG2 462 aa16.98■□□□□ 0.31
SPTLC2-202ENST00000554365 LNPKQ9C0E8 428 aa16.98■□□□□ 0.31
SPTLC2-202ENST00000554365 C11orf49Q9H6J7 331 aa16.98■□□□□ 0.31
SPTLC2-202ENST00000554365 TXNRD2Q9NNW7 524 aa16.98■□□□□ 0.31
SPTLC2-202ENST00000554365 IL1RAPL2Q9NP60 686 aa16.98■□□□□ 0.31
SPTLC2-202ENST00000554365 ZBTB21Q9ULJ3 1066 aa16.98■□□□□ 0.31
SPTLC2-202ENST00000554365 HLA-DOAP06340 250 aa16.97■□□□□ 0.31
SPTLC2-202ENST00000554365 DYNLL1P63167 89 aaKnown RBP16.97■□□□□ 0.31
SPTLC2-202ENST00000554365 SOCS4Q8WXH5 440 aa16.97■□□□□ 0.31
SPTLC2-202ENST00000554365 PAGR1Q9BTK6 254 aa16.97■□□□□ 0.31
SPTLC2-202ENST00000554365 PIH1D3Q9NQM4 214 aaKnown RBP16.97■□□□□ 0.31
SPTLC2-202ENST00000554365 ALPK3Q96L96 1907 aa16.97■□□□□ 0.31
SPTLC2-202ENST00000554365 SALL3Q9BXA9 1300 aa16.96■□□□□ 0.31
SPTLC2-202ENST00000554365 PLXNB2O15031 1838 aa16.96■□□□□ 0.31
SPTLC2-202ENST00000554365 PRKAR2AP13861 404 aaKnown RBP16.96■□□□□ 0.31
SPTLC2-202ENST00000554365 SYN1P17600 705 aa16.96■□□□□ 0.31
SPTLC2-202ENST00000554365 CYP7A1P22680 504 aa16.96■□□□□ 0.31
SPTLC2-202ENST00000554365 METTL16Q86W50 562 aaKnown RBP16.96■□□□□ 0.31
SPTLC2-202ENST00000554365 GDF15Q99988 308 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms