RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 GJA8P48165 433 aa12.15□□□□□ -0.46
ACTN1-208ENST00000553370 FLT3LGP49771 235 aa12.15□□□□□ -0.46
ACTN1-208ENST00000553370 MTX1Q13505 466 aa12.15□□□□□ -0.46
ACTN1-208ENST00000553370 NAA16Q6N069 864 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-208ENST00000553370 NSUN4Q96CB9 384 aaKnown RBP12.15□□□□□ -0.46
ACTN1-208ENST00000553370 SHISA4Q96DD7 197 aa12.15□□□□□ -0.46
ACTN1-208ENST00000553370 TBC1D2Q9BYX2 928 aa12.15□□□□□ -0.46
ACTN1-208ENST00000553370 UNC93B1Q9H1C4 597 aa12.15□□□□□ -0.46
ACTN1-208ENST00000553370 CWC22Q9HCG8 908 aaKnown RBP12.15□□□□□ -0.46
ACTN1-208ENST00000553370 SNRKQ9NRH2 765 aa12.15□□□□□ -0.46
ACTN1-208ENST00000553370 GABRQQ9UN88 632 aa12.15□□□□□ -0.46
ACTN1-208ENST00000553370 NR2E3Q9Y5X4 410 aa12.15□□□□□ -0.46
ACTN1-208ENST00000553370 HAX1O00165 279 aa12.14□□□□□ -0.47
ACTN1-208ENST00000553370 SLURP2P0DP57 97 aa12.14□□□□□ -0.47
ACTN1-208ENST00000553370 HMGCS2P54868 508 aa12.14□□□□□ -0.47
ACTN1-208ENST00000553370 RHBDL3P58872 404 aa12.14□□□□□ -0.47
ACTN1-208ENST00000553370 IRX3P78415 501 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-208ENST00000553370 SPP2Q13103 211 aa12.14□□□□□ -0.47
ACTN1-208ENST00000553370 TREML2Q5T2D2 321 aa12.14□□□□□ -0.47
ACTN1-208ENST00000553370 ZKSCAN2Q63HK3 967 aa12.14□□□□□ -0.47
ACTN1-208ENST00000553370 CCAR1Q8IX12 1150 aaKnown RBP12.14□□□□□ -0.47
ACTN1-208ENST00000553370 PROCA1Q8NCQ7 364 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-208ENST00000553370 ZNF280CQ8ND82 737 aa12.14□□□□□ -0.47
ACTN1-208ENST00000553370 SH3RF3Q8TEJ3 882 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-208ENST00000553370 U2AF1L4Q8WU68 220 aaKnown RBP12.14□□□□□ -0.47
ACTN1-208ENST00000553370 AATFQ9NY61 560 aaKnown RBP eCLIP12.14□□□□□ -0.47
ACTN1-208ENST00000553370 TMOD4Q9NZQ9 345 aa12.14□□□□□ -0.47
ACTN1-208ENST00000553370 HERC5Q9UII4 1024 aaKnown RBP12.14□□□□□ -0.47
ACTN1-208ENST00000553370 PNMA6EA0A0J9YXQ4 647 aa12.13□□□□□ -0.47
ACTN1-208ENST00000553370 USP17L5A8MUK1 530 aa12.13□□□□□ -0.47
ACTN1-208ENST00000553370 TBC1D12O60347 775 aa12.13□□□□□ -0.47
ACTN1-208ENST00000553370 BCAR3O75815 825 aa12.13□□□□□ -0.47
ACTN1-208ENST00000553370 HLA-DOAP06340 250 aa12.13□□□□□ -0.47
ACTN1-208ENST00000553370 MCAMP43121 646 aa12.13□□□□□ -0.47
ACTN1-208ENST00000553370 GCLCP48506 637 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-208ENST00000553370 FAM110CQ1W6H9 321 aa12.13□□□□□ -0.47
ACTN1-208ENST00000553370 MAPKAPK5Q8IW41 473 aa12.13□□□□□ -0.47
ACTN1-208ENST00000553370 ITPRIPQ8IWB1 547 aa12.13□□□□□ -0.47
ACTN1-208ENST00000553370 DHX36Q9H2U1 1008 aaKnown RBP12.13□□□□□ -0.47
ACTN1-208ENST00000553370 DDX60LQ5H9U9 1706 aaKnown RBP12.13□□□□□ -0.47
ACTN1-208ENST00000553370 MYH7P12883 1935 aa12.13□□□□□ -0.47
ACTN1-208ENST00000553370 EVI5O60447 810 aa12.12□□□□□ -0.47
ACTN1-208ENST00000553370 SURF6O75683 361 aaKnown RBP12.12□□□□□ -0.47
ACTN1-208ENST00000553370 FXR1P51114 621 aaKnown RBP eCLIP12.12□□□□□ -0.47
ACTN1-208ENST00000553370 TNNI3KQ59H18 835 aa12.12□□□□□ -0.47
ACTN1-208ENST00000553370 TMEM57Q8N5G2 664 aa12.12□□□□□ -0.47
ACTN1-208ENST00000553370 DEFB118Q96PH6 123 aa12.12□□□□□ -0.47
ACTN1-208ENST00000553370 PI4KBQ9UBF8 816 aa12.12□□□□□ -0.47
ACTN1-208ENST00000553370 TNNQ9UQP3 1299 aa12.12□□□□□ -0.47
ACTN1-208ENST00000553370 FPGT-TNNI3KV9GXZ4 949 aa12.12□□□□□ -0.47
ACTN1-208ENST00000553370 RANBP2P49792 3224 aaKnown RBP12.12□□□□□ -0.47
ACTN1-208ENST00000553370 PLXNB2O15031 1838 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 SGPL1O95470 568 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 ASNSP08243 561 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 CAP2P40123 477 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 IRF5Q13568 498 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 MTMR2Q13614 643 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 PDE3AQ14432 1141 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 PXYLP1Q8TE99 480 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 TGFBRAP1Q8WUH2 860 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 FEZ1Q99689 392 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 DBNDD2Q9BQY9 259 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 C1orf115Q9H7X2 142 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 SAP30BPQ9UHR5 308 aaKnown RBP12.11□□□□□ -0.47
ACTN1-208ENST00000553370 FRMPD3Q5JV73 1810 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 FLT1P17948 1338 aa12.11□□□□□ -0.47
ACTN1-208ENST00000553370 IDH1O75874 414 aaKnown RBP12.1□□□□□ -0.47
ACTN1-208ENST00000553370 GDF11O95390 407 aa12.1□□□□□ -0.47
ACTN1-208ENST00000553370 HMGCRP04035 888 aa12.1□□□□□ -0.47
ACTN1-208ENST00000553370 PDE4AP27815 886 aa12.1□□□□□ -0.47
ACTN1-208ENST00000553370 USP5P45974 858 aa12.1□□□□□ -0.47
ACTN1-208ENST00000553370 HNRNPUQ00839 825 aaKnown RBP eCLIP12.1□□□□□ -0.473e-7■■□□□ 13
ACTN1-208ENST00000553370 ZNF384Q8TF68 577 aa12.1□□□□□ -0.47
ACTN1-208ENST00000553370 ASCC2Q9H1I8 757 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-208ENST00000553370 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-208ENST00000553370 BAZ2AQ9UIF9 1905 aaKnown RBP12.09□□□□□ -0.47
ACTN1-208ENST00000553370 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
ACTN1-208ENST00000553370 CAPN2P17655 700 aa12.09□□□□□ -0.47
ACTN1-208ENST00000553370 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.09□□□□□ -0.47
ACTN1-208ENST00000553370 BCL11AQ9H165 835 aa12.09□□□□□ -0.47
ACTN1-208ENST00000553370 GPR108Q9NPR9 543 aa12.09□□□□□ -0.47
ACTN1-208ENST00000553370 C19orf67A6NJJ6 358 aa12.08□□□□□ -0.48
ACTN1-208ENST00000553370 CYP7A1P22680 504 aa12.08□□□□□ -0.48
ACTN1-208ENST00000553370 ZAP70P43403 619 aa12.08□□□□□ -0.48
ACTN1-208ENST00000553370 WDR78Q5VTH9 848 aa12.08□□□□□ -0.48
ACTN1-208ENST00000553370 NECAB2Q7Z6G3 386 aa12.08□□□□□ -0.48
ACTN1-208ENST00000553370 LARP6Q9BRS8 491 aaKnown RBP12.08□□□□□ -0.48
ACTN1-208ENST00000553370 PAGR1Q9BTK6 254 aa12.08□□□□□ -0.48
ACTN1-208ENST00000553370 HMX1Q9NP08 348 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-208ENST00000553370 PALD1Q9ULE6 856 aa12.08□□□□□ -0.48
ACTN1-208ENST00000553370 ZBTB21Q9ULJ3 1066 aa12.08□□□□□ -0.48
ACTN1-208ENST00000553370 C19orf81C9J6K1 198 aa12.07□□□□□ -0.48
ACTN1-208ENST00000553370 USP17L10C9JJH3 530 aa12.07□□□□□ -0.48
ACTN1-208ENST00000553370 CYP2B6P20813 491 aa12.07□□□□□ -0.48
ACTN1-208ENST00000553370 BACE1P56817 501 aa12.07□□□□□ -0.48
ACTN1-208ENST00000553370 ATP8B2P98198 1209 aa12.07□□□□□ -0.48
ACTN1-208ENST00000553370 ZYXQ15942 572 aaKnown RBP12.07□□□□□ -0.48
ACTN1-208ENST00000553370 CERS3Q8IU89 383 aa12.07□□□□□ -0.48
ACTN1-208ENST00000553370 MIGA1Q8NAN2 632 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms