RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	ZSCAN20	P17040	1043 aa	Predicted RBP	9.09	□□□□□ -0.95
PFKM-231	ENST00000553055	PTGIR	P43119	386 aa		9.09	□□□□□ -0.95
PFKM-231	ENST00000553055	PPM1F	P49593	454 aa	Predicted RBP	9.09	□□□□□ -0.95
PFKM-231	ENST00000553055	DHCR24	Q15392	516 aa		9.09	□□□□□ -0.95
PFKM-231	ENST00000553055	ALF	Q53S48	1182 aa		9.09	□□□□□ -0.95
PFKM-231	ENST00000553055	ANO1	Q5XXA6	986 aa		9.09	□□□□□ -0.95
PFKM-231	ENST00000553055	CCDC174	Q6PII3	467 aa		9.09	□□□□□ -0.95
PFKM-231	ENST00000553055	RUFY4	Q6ZNE9	571 aa		9.09	□□□□□ -0.95
PFKM-231	ENST00000553055	ZSCAN1	Q8NBB4	408 aa		9.09	□□□□□ -0.95
PFKM-231	ENST00000553055	KISS1R	Q969F8	398 aa	Predicted RBP	9.09	□□□□□ -0.95
PFKM-231	ENST00000553055	DHRS4	Q9BTZ2	278 aa		9.09	□□□□□ -0.95
PFKM-231	ENST00000553055	SEC31B	Q9NQW1	1179 aa		9.09	□□□□□ -0.95
PFKM-231	ENST00000553055	DACH1	Q9UI36	760 aa		9.09	□□□□□ -0.95
PFKM-231	ENST00000553055	PCDHB5	Q9Y5E4	795 aa		9.09	□□□□□ -0.95
PFKM-231	ENST00000553055	WDR7	Q9Y4E6	1490 aa		9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	RASSF10	A6NK89	507 aa		9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	UPK3BL1	B0FP48	263 aa		9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	UPK3BL2	E5RIL1	263 aa		9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	ABLIM3	O94929	683 aa		9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	ATE1	O95260	518 aa		9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	ITPKA	P23677	461 aa		9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	L1CAM	P32004	1257 aa		9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	STAT4	Q14765	748 aa		9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	IL31	Q6EBC2	164 aa		9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	PJA1	Q8NG27	643 aa		9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	SLC7A3	Q8WY07	619 aa		9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	DDX1	Q92499	740 aa	Known RBP	9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	SARG	Q9BW04	601 aa		9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	PHAX	Q9H814	394 aa	Known RBP	9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	PUF60	Q9UHX1	559 aa	Known RBP	9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	SALL4	Q9UJQ4	1053 aa		9.08	□□□□□ -0.96
PFKM-231	ENST00000553055	STRC	Q7RTU9	1775 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	POTEJ	P0CG39	1038 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	HSPA1L	P34931	641 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	CASP2	P42575	452 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	PPP2R3A	Q06190	1150 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	LRRC14	Q15048	493 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	SLC27A3	Q5K4L6	730 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	FAM83B	Q5T0W9	1011 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	KANK3	Q6NY19	840 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	ERAP2	Q6P179	960 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	MORC1	Q86VD1	984 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	TAB3	Q8N5C8	712 aa	Predicted RBP	9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	ANKRD42	Q8N9B4	389 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	CCDC8	Q9H0W5	538 aa	Predicted RBP	9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	STRN4	Q9NRL3	753 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	TRHDE	Q9UKU6	1024 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	GTF2A1L	Q9UNN4	478 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	CYP8B1	Q9UNU6	501 aa		9.07	□□□□□ -0.96
PFKM-231	ENST00000553055	PRPF3	O43395	683 aa	Known RBP	9.06	□□□□□ -0.96
PFKM-231	ENST00000553055	PAGE1	O75459	146 aa		9.06	□□□□□ -0.96
PFKM-231	ENST00000553055	CYP2E1	P05181	493 aa	Predicted RBP	9.06	□□□□□ -0.96
PFKM-231	ENST00000553055	PHKG2	P15735	406 aa		9.06	□□□□□ -0.96
PFKM-231	ENST00000553055	NEK3	P51956	506 aa		9.06	□□□□□ -0.96
PFKM-231	ENST00000553055	C4orf17	Q53FE4	359 aa		9.06	□□□□□ -0.96
PFKM-231	ENST00000553055	SYDE2	Q5VT97	1194 aa		9.06	□□□□□ -0.96
PFKM-231	ENST00000553055	EXOC2	Q96KP1	924 aa		9.06	□□□□□ -0.96
PFKM-231	ENST00000553055	RHOBTB2	Q9BYZ6	727 aa		9.06	□□□□□ -0.96
PFKM-231	ENST00000553055	TMEM39A	Q9NV64	488 aa		9.06	□□□□□ -0.96
PFKM-231	ENST00000553055	PPP2R3B	Q9Y5P8	575 aa		9.06	□□□□□ -0.96
PFKM-231	ENST00000553055	TRAV20	A0A0B4J274	112 aa		9.05	□□□□□ -0.96
PFKM-231	ENST00000553055	ANO9	A1A5B4	782 aa		9.05	□□□□□ -0.96
PFKM-231	ENST00000553055	MEIS3P2	A8K0S8	358 aa		9.05	□□□□□ -0.96
PFKM-231	ENST00000553055	MLEC	Q14165	292 aa		9.05	□□□□□ -0.96
PFKM-231	ENST00000553055	MINDY4	Q4G0A6	757 aa		9.05	□□□□□ -0.96
PFKM-231	ENST00000553055	KDF1	Q8NAX2	398 aa	Predicted RBP	9.05	□□□□□ -0.96
PFKM-231	ENST00000553055	CLUHP3	Q96NS8	147 aa		9.05	□□□□□ -0.96
PFKM-231	ENST00000553055	TTC1	Q99614	292 aa		9.05	□□□□□ -0.96
PFKM-231	ENST00000553055	OSMR	Q99650	979 aa		9.05	□□□□□ -0.96
PFKM-231	ENST00000553055	ELAC2	Q9BQ52	826 aa	Known RBP	9.05	□□□□□ -0.96
PFKM-231	ENST00000553055	ZKSCAN3	Q9BRR0	538 aa		9.05	□□□□□ -0.96
PFKM-231	ENST00000553055	HERPUD2	Q9BSE4	406 aa		9.05	□□□□□ -0.96
PFKM-231	ENST00000553055	AS3MT	Q9HBK9	375 aa		9.05	□□□□□ -0.96
PFKM-231	ENST00000553055	NRBP1	Q9UHY1	535 aa		9.05	□□□□□ -0.96
PFKM-231	ENST00000553055	TRBV23-1	A0A0A0MS06	115 aa		9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	FBXO21	O94952	628 aa		9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	NR3C2	P08235	984 aa		9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	GPC1	P35052	558 aa		9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	POU5F1	Q01860	360 aa	Known RBP	9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	RPL6	Q02878	288 aa	Known RBP	9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	TCIRG1	Q13488	830 aa		9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	RC3H1	Q5TC82	1133 aa	Known RBP	9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	NCAPG2	Q86XI2	1143 aa		9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	CNTD1	Q8N815	330 aa		9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	OR13H1	Q8NG92	308 aa		9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	TMEM40	Q8WWA1	233 aa		9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	USP7	Q93009	1102 aa		9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	STRBP	Q96SI9	672 aa	Known RBP	9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	RCAN3	Q9UKA8	241 aa		9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	CARMIL2	Q6F5E8	1435 aa		9.04	□□□□□ -0.96
PFKM-231	ENST00000553055	ZCCHC11	Q5TAX3	1644 aa	Known RBP	9.03	□□□□□ -0.96
PFKM-231	ENST00000553055	SLC26A4	O43511	780 aa		9.03	□□□□□ -0.96
PFKM-231	ENST00000553055	TIMM44	O43615	452 aa		9.03	□□□□□ -0.96
PFKM-231	ENST00000553055	NAT2	P11245	290 aa		9.03	□□□□□ -0.96
PFKM-231	ENST00000553055	SDS	P20132	328 aa		9.03	□□□□□ -0.96
PFKM-231	ENST00000553055	POU3F2	P20265	443 aa	Predicted RBP	9.03	□□□□□ -0.96
PFKM-231	ENST00000553055	GRIA4	P48058	902 aa		9.03	□□□□□ -0.96
PFKM-231	ENST00000553055	NEK4	P51957	841 aa		9.03	□□□□□ -0.96
PFKM-231	ENST00000553055	LSM11	P83369	360 aa	Known RBP eCLIP	9.03	□□□□□ -0.96

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