RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 ANGEL2Q5VTE6 544 aaKnown RBP9.05□□□□□ -0.96
RNF41-208ENST00000550379 RCSD1Q6JBY9 416 aa9.05□□□□□ -0.96
RNF41-208ENST00000550379 TMEM179Q6ZVK1 233 aa9.05□□□□□ -0.96
RNF41-208ENST00000550379 SULF1Q8IWU6 871 aa9.05□□□□□ -0.96
RNF41-208ENST00000550379 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.05□□□□□ -0.96
RNF41-208ENST00000550379 KANSL2Q9H9L4 492 aa9.05□□□□□ -0.96
RNF41-208ENST00000550379 PDRG1Q9NUG6 133 aa9.05□□□□□ -0.96
RNF41-208ENST00000550379 GGA3Q9NZ52 723 aa9.05□□□□□ -0.96
RNF41-208ENST00000550379 NYAP2Q9P242 653 aa9.05□□□□□ -0.96
RNF41-208ENST00000550379 LIMCH1Q9UPQ0 1083 aa9.05□□□□□ -0.96
RNF41-208ENST00000550379 CYP2D7A0A087X1C5 515 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 CLRN2A0PK11 232 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 B4E1Z4 1266 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 TCP10L2B9ZVM9 353 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 K7ELQ4 463 aaPredicted RBP9.04□□□□□ -0.96
RNF41-208ENST00000550379 SH2B2O14492 632 aaPredicted RBP9.04□□□□□ -0.96
RNF41-208ENST00000550379 PRC1O43663 620 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 KDM4AO75164 1064 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 ASNSP08243 561 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 CYP2D6P10635 497 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 CAP2P40123 477 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 PICALMQ13492 652 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 BECN1Q14457 450 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 CYB5R4Q7L1T6 521 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 FAM177A1Q8N128 213 aaPredicted RBP9.04□□□□□ -0.96
RNF41-208ENST00000550379 KLRG1Q96E93 195 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 ZSCAN10Q96SZ4 725 aaPredicted RBP9.04□□□□□ -0.96
RNF41-208ENST00000550379 TMEM39BQ9GZU3 492 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 LY9Q9HBG7 655 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 MKNK2Q9HBH9 465 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 IL17RBQ9NRM6 502 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 MTMR4Q9NYA4 1195 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 PAPPA2Q9BXP8 1791 aa9.04□□□□□ -0.96
RNF41-208ENST00000550379 ERICH2A1L162 156 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 DDAH1O94760 285 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 CALM1P0DP23 149 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 CALM2P0DP24 149 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 CALM3P0DP25 149 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 SNHG28P0DPA3 235 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 ANP32AP39687 249 aaKnown RBP9.03□□□□□ -0.96
RNF41-208ENST00000550379 CACNB3P54284 484 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 AK2P54819 239 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 TFAP4Q01664 338 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 TCP10Q12799 353 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 TROAPQ12815 778 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 CERKLQ49MI3 558 aaPredicted RBP9.03□□□□□ -0.96
RNF41-208ENST00000550379 KRT26Q7Z3Y9 468 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 TEX2Q8IWB9 1127 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 ENAHQ8N8S7 591 aaPredicted RBP9.03□□□□□ -0.96
RNF41-208ENST00000550379 DYNLL2Q96FJ2 89 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 LLPHQ9BRT6 129 aaKnown RBP9.03□□□□□ -0.96
RNF41-208ENST00000550379 UBAC1Q9BSL1 405 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 WDR18Q9BV38 432 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 ZNF341Q9BYN7 854 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 UPF3BQ9BZI7 483 aaKnown RBP9.03□□□□□ -0.96
RNF41-208ENST00000550379 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.03□□□□□ -0.96
RNF41-208ENST00000550379 VEZTQ9HBM0 779 aa9.03□□□□□ -0.96
RNF41-208ENST00000550379 SAP30BPQ9UHR5 308 aaKnown RBP9.03□□□□□ -0.96
RNF41-208ENST00000550379 CCDC196A0A1B0GTZ2 297 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 TSPY2A6NKD2 308 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 SMIM22K7EJ46 135 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 IFIT3O14879 490 aaKnown RBP9.02□□□□□ -0.97
RNF41-208ENST00000550379 DHX16O60231 1041 aaKnown RBP9.02□□□□□ -0.97
RNF41-208ENST00000550379 PPP1R12BO60237 982 aaPredicted RBP9.02□□□□□ -0.97
RNF41-208ENST00000550379 RANBP6O60518 1105 aaKnown RBP9.02□□□□□ -0.97
RNF41-208ENST00000550379 PLA2G6O60733 806 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 PFKFB2O60825 505 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 TTLL1O95922 423 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 TSPY3P0CV98 308 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 TSPY8P0CW00 308 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 TOP1P11387 765 aaKnown RBP9.02□□□□□ -0.97
RNF41-208ENST00000550379 GUCY1A2P33402 732 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 COL9A3Q14050 684 aaPredicted RBP9.02□□□□□ -0.97
RNF41-208ENST00000550379 LDLRAD1Q5T700 205 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 RBM26Q5T8P6 1007 aaKnown RBP9.02□□□□□ -0.97
RNF41-208ENST00000550379 NBPF12Q5TAG4 269 aaPredicted RBP9.02□□□□□ -0.97
RNF41-208ENST00000550379 APOA5Q6Q788 366 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 SIAH1Q8IUQ4 282 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 ZSCAN29Q8IWY8 852 aaPredicted RBP9.02□□□□□ -0.97
RNF41-208ENST00000550379 CRACR2BQ8N4Y2 399 aaPredicted RBP9.02□□□□□ -0.97
RNF41-208ENST00000550379 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.02□□□□□ -0.97
RNF41-208ENST00000550379 NKX2-3Q8TAU0 364 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 TMX3Q96JJ7 454 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 SSC5DA1L4H1 1573 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 ASTN2O75129 1339 aaPredicted RBP9.02□□□□□ -0.97
RNF41-208ENST00000550379 TNKSO95271 1327 aa9.02□□□□□ -0.97
RNF41-208ENST00000550379 USP2O75604 605 aaPredicted RBP9.01□□□□□ -0.97
RNF41-208ENST00000550379 CD2BP2O95400 341 aaKnown RBP9.01□□□□□ -0.97
RNF41-208ENST00000550379 ITGBL1O95965 494 aaPredicted RBP9.01□□□□□ -0.97
RNF41-208ENST00000550379 PDIA3P30101 505 aaKnown RBP9.01□□□□□ -0.97
RNF41-208ENST00000550379 NF2P35240 595 aa9.01□□□□□ -0.97
RNF41-208ENST00000550379 EVX2Q03828 476 aa9.01□□□□□ -0.97
RNF41-208ENST00000550379 WTAPQ15007 396 aa9.01□□□□□ -0.97
RNF41-208ENST00000550379 ABCB5Q2M3G0 1257 aa9.01□□□□□ -0.97
RNF41-208ENST00000550379 TMEM67Q5HYA8 995 aa9.01□□□□□ -0.97
RNF41-208ENST00000550379 Q6ZUG5 572 aa9.01□□□□□ -0.97
RNF41-208ENST00000550379 SLC44A5Q8NCS7 719 aa9.01□□□□□ -0.97
RNF41-208ENST00000550379 GMCL1P1Q8NEA9 526 aa9.01□□□□□ -0.97
RNF41-208ENST00000550379 KIAA1683Q9H0B3 1180 aa9.01□□□□□ -0.97
RNF41-208ENST00000550379 CWC22Q9HCG8 908 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms