RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	CLEC10A	Q8IUN9	316 aa		13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	RILPL2	Q969X0	211 aa		13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	EVI5L	Q96CN4	794 aa		13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	HERC5	Q9UII4	1024 aa	Known RBP	13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	KCNH4	Q9UQ05	1017 aa		13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	AFG3L2	Q9Y4W6	797 aa		13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	TRIM6-TRIM34	B2RNG4	842 aa		13.49	□□□□□ -0.25
RAB5B-208	ENST00000550283	PPAT	Q06203	517 aa		13.49	□□□□□ -0.25
RAB5B-208	ENST00000550283	C1QBP	Q07021	282 aa	Known RBP	13.49	□□□□□ -0.25
RAB5B-208	ENST00000550283	C12orf60	Q5U649	245 aa		13.49	□□□□□ -0.25
RAB5B-208	ENST00000550283	GPAT2	Q6NUI2	795 aa		13.49	□□□□□ -0.25
RAB5B-208	ENST00000550283	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.49	□□□□□ -0.25
RAB5B-208	ENST00000550283	STK11IP	Q8N1F8	1099 aa		13.49	□□□□□ -0.25
RAB5B-208	ENST00000550283	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.49	□□□□□ -0.25
RAB5B-208	ENST00000550283	EHD4	Q9H223	541 aa		13.49	□□□□□ -0.25
RAB5B-208	ENST00000550283	PRDM10	Q9NQV6	1147 aa		13.49	□□□□□ -0.25
RAB5B-208	ENST00000550283	TRIM75P	A6NK02	468 aa		13.48	□□□□□ -0.25
RAB5B-208	ENST00000550283	GH2	P01242	217 aa		13.48	□□□□□ -0.25
RAB5B-208	ENST00000550283	POLR3D	P05423	398 aa	Predicted RBP	13.48	□□□□□ -0.25
RAB5B-208	ENST00000550283	HLA-DOA	P06340	250 aa		13.48	□□□□□ -0.25
RAB5B-208	ENST00000550283	ZFY	P08048	801 aa	Predicted RBP	13.48	□□□□□ -0.25
RAB5B-208	ENST00000550283	TTC22	Q5TAA0	569 aa		13.48	□□□□□ -0.25
RAB5B-208	ENST00000550283	CERS3	Q8IU89	383 aa		13.48	□□□□□ -0.25
RAB5B-208	ENST00000550283	NKX2-3	Q8TAU0	364 aa		13.48	□□□□□ -0.25
RAB5B-208	ENST00000550283	INCENP	Q9NQS7	918 aa		13.48	□□□□□ -0.25
RAB5B-208	ENST00000550283	ATP8A2	Q9NTI2	1148 aa		13.48	□□□□□ -0.25
RAB5B-208	ENST00000550283	SERPINB13	Q9UIV8	391 aa		13.48	□□□□□ -0.25
RAB5B-208	ENST00000550283	ZBTB21	Q9ULJ3	1066 aa		13.48	□□□□□ -0.25
RAB5B-208	ENST00000550283	PTPRF	P10586	1907 aa		13.47	□□□□□ -0.25
RAB5B-208	ENST00000550283		A0A0G2JLL6	359 aa	Predicted RBP	13.47	□□□□□ -0.25
RAB5B-208	ENST00000550283	SDS	P20132	328 aa		13.47	□□□□□ -0.25
RAB5B-208	ENST00000550283	GTF2A2	P52657	109 aa		13.47	□□□□□ -0.25
RAB5B-208	ENST00000550283	SREBF2	Q12772	1141 aa		13.47	□□□□□ -0.25
RAB5B-208	ENST00000550283	SPP2	Q13103	211 aa		13.47	□□□□□ -0.25
RAB5B-208	ENST00000550283	CRHR2	Q13324	411 aa		13.47	□□□□□ -0.25
RAB5B-208	ENST00000550283	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.47	□□□□□ -0.25
RAB5B-208	ENST00000550283	PICK1	Q9NRD5	415 aa		13.47	□□□□□ -0.25
RAB5B-208	ENST00000550283	SAGE1	Q9NXZ1	904 aa		13.47	□□□□□ -0.25
RAB5B-208	ENST00000550283	CASP8AP2	Q9UKL3	1982 aa		13.47	□□□□□ -0.25
RAB5B-208	ENST00000550283	CCDC85C	A6NKD9	419 aa		13.46	□□□□□ -0.25
RAB5B-208	ENST00000550283	AKR1B1	P15121	316 aa		13.46	□□□□□ -0.25
RAB5B-208	ENST00000550283	SNAPC2	Q13487	334 aa		13.46	□□□□□ -0.25
RAB5B-208	ENST00000550283	TREML2	Q5T2D2	321 aa		13.46	□□□□□ -0.25
RAB5B-208	ENST00000550283	TTC6	Q86TZ1	520 aa		13.46	□□□□□ -0.25
RAB5B-208	ENST00000550283	SIAH1	Q8IUQ4	282 aa		13.46	□□□□□ -0.25
RAB5B-208	ENST00000550283	IFNL3	Q8IZI9	196 aa		13.46	□□□□□ -0.25
RAB5B-208	ENST00000550283	ACER1	Q8TDN7	264 aa		13.46	□□□□□ -0.25
RAB5B-208	ENST00000550283	BEGAIN	Q9BUH8	593 aa		13.46	□□□□□ -0.25
RAB5B-208	ENST00000550283	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
RAB5B-208	ENST00000550283	ZSWIM8	A7E2V4	1837 aa		13.46	□□□□□ -0.26
RAB5B-208	ENST00000550283		A0A1W2PRG0	241 aa		13.45	□□□□□ -0.26
RAB5B-208	ENST00000550283	PATL2	C9JE40	543 aa	Known RBP	13.45	□□□□□ -0.26
RAB5B-208	ENST00000550283	PEX10	O60683	326 aa		13.45	□□□□□ -0.26
RAB5B-208	ENST00000550283	CETP	P11597	493 aa		13.45	□□□□□ -0.26
RAB5B-208	ENST00000550283	CDK8	P49336	464 aa		13.45	□□□□□ -0.26
RAB5B-208	ENST00000550283	SEPT2	Q15019	361 aa		13.45	□□□□□ -0.26
RAB5B-208	ENST00000550283	KIAA1755	Q5JYT7	1200 aa		13.45	□□□□□ -0.26
RAB5B-208	ENST00000550283	C16orf86	Q6ZW13	317 aa		13.45	□□□□□ -0.26
RAB5B-208	ENST00000550283	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.45	□□□□□ -0.26
RAB5B-208	ENST00000550283	ADGRA2	Q96PE1	1338 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	USP17L5	A8MUK1	530 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	MINDY4B	A8MYZ0	360 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	GPR25	O00155	361 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	CXCL11	O14625	94 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	CA12	O43570	354 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	PRDM1	O75626	825 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	CYP2C8	P10632	490 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	RGS19	P49795	217 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	HMGCS2	P54868	508 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	INHBE	P58166	350 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	MTMR2	Q13614	643 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	CERKL	Q49MI3	558 aa	Predicted RBP	13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	SBK1	Q52WX2	424 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	POTEE	Q6S8J3	1075 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	GADL1	Q6ZQY3	521 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	REM2	Q8IYK8	340 aa	Predicted RBP	13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	ZNF280C	Q8ND82	737 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	CFHR5	Q9BXR6	569 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	NBPF3	Q9H094	633 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	HELLS	Q9NRZ9	838 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	HTT	P42858	3142 aa		13.44	□□□□□ -0.26
RAB5B-208	ENST00000550283	LOC285556	D6RIA3	1793 aa		13.43	□□□□□ -0.26
RAB5B-208	ENST00000550283	PDHX	O00330	501 aa		13.43	□□□□□ -0.26
RAB5B-208	ENST00000550283	APP	P05067	770 aa		13.43	□□□□□ -0.26
RAB5B-208	ENST00000550283	NEFL	P07196	543 aa		13.43	□□□□□ -0.26
RAB5B-208	ENST00000550283	RASA1	P20936	1047 aa		13.43	□□□□□ -0.26
RAB5B-208	ENST00000550283	CTGF	P29279	349 aa		13.43	□□□□□ -0.26
RAB5B-208	ENST00000550283	CTDSPL2	Q05D32	466 aa		13.43	□□□□□ -0.26
RAB5B-208	ENST00000550283	ABCB5	Q2M3G0	1257 aa		13.43	□□□□□ -0.26
RAB5B-208	ENST00000550283	MCMDC2	Q4G0Z9	681 aa		13.43	□□□□□ -0.26
RAB5B-208	ENST00000550283	CWC27	Q6UX04	472 aa	Known RBP	13.43	□□□□□ -0.26
RAB5B-208	ENST00000550283	WDR18	Q9BV38	432 aa		13.43	□□□□□ -0.26
RAB5B-208	ENST00000550283	TRIM34	Q9BYJ4	488 aa		13.43	□□□□□ -0.26
RAB5B-208	ENST00000550283	EMILIN3	Q9NT22	766 aa		13.43	□□□□□ -0.26
RAB5B-208	ENST00000550283	ROBO3	Q96MS0	1386 aa		13.43	□□□□□ -0.26
RAB5B-208	ENST00000550283	ECM2	O94769	699 aa	Predicted RBP	13.42	□□□□□ -0.26
RAB5B-208	ENST00000550283	ASNS	P08243	561 aa		13.42	□□□□□ -0.26
RAB5B-208	ENST00000550283	HSPD1	P10809	573 aa	Known RBP	13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms