RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 FSD1Q9BTV5 496 aa13.15□□□□□ -0.3
GCN1-202ENST00000547263 PICK1Q9NRD5 415 aa13.15□□□□□ -0.3
GCN1-202ENST00000547263 MCM9Q9NXL9 1143 aa13.15□□□□□ -0.3
GCN1-202ENST00000547263 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.15□□□□□ -0.3
GCN1-202ENST00000547263 ZBTB21Q9ULJ3 1066 aa13.15□□□□□ -0.3
GCN1-202ENST00000547263 SLC45A1Q9Y2W3 748 aa13.15□□□□□ -0.3
GCN1-202ENST00000547263 SLC4A4Q9Y6R1 1079 aa13.15□□□□□ -0.3
GCN1-202ENST00000547263 ZHX2Q9Y6X8 837 aa13.15□□□□□ -0.3
GCN1-202ENST00000547263 USP17L5A8MUK1 530 aa13.14□□□□□ -0.31
GCN1-202ENST00000547263 USP17L12C9JPN9 530 aa13.14□□□□□ -0.31
GCN1-202ENST00000547263 USP17L21D6R901 530 aa13.14□□□□□ -0.31
GCN1-202ENST00000547263 SMIM22K7EJ46 135 aa13.14□□□□□ -0.31
GCN1-202ENST00000547263 CYP2D6P10635 497 aa13.14□□□□□ -0.31
GCN1-202ENST00000547263 GUCY1A2P33402 732 aa13.14□□□□□ -0.31
GCN1-202ENST00000547263 OTUD7BQ6GQQ9 843 aa13.14□□□□□ -0.31
GCN1-202ENST00000547263 CTR9Q6PD62 1173 aa13.14□□□□□ -0.31
GCN1-202ENST00000547263 C16orf86Q6ZW13 317 aa13.14□□□□□ -0.31
GCN1-202ENST00000547263 ZNF280CQ8ND82 737 aa13.14□□□□□ -0.31
GCN1-202ENST00000547263 SEC62Q99442 399 aaKnown RBP13.14□□□□□ -0.31
GCN1-202ENST00000547263 HELLSQ9NRZ9 838 aa13.14□□□□□ -0.31
GCN1-202ENST00000547263 ARPP21Q9UBL0 812 aaPredicted RBP13.14□□□□□ -0.31
GCN1-202ENST00000547263 SWAP70Q9UH65 585 aa13.14□□□□□ -0.31
GCN1-202ENST00000547263 PATL2C9JE40 543 aaKnown RBP13.13□□□□□ -0.31
GCN1-202ENST00000547263 TBC1D8O95759 1140 aa13.13□□□□□ -0.31
GCN1-202ENST00000547263 CRHR2Q13324 411 aa13.13□□□□□ -0.31
GCN1-202ENST00000547263 CCDC84Q86UT8 332 aaPredicted RBP13.13□□□□□ -0.31
GCN1-202ENST00000547263 CRACR2BQ8N4Y2 399 aaPredicted RBP13.13□□□□□ -0.31
GCN1-202ENST00000547263 PROCA1Q8NCQ7 364 aaPredicted RBP13.13□□□□□ -0.31
GCN1-202ENST00000547263 ZMYM6O95789 1325 aa13.13□□□□□ -0.31
GCN1-202ENST00000547263 TLR2O60603 784 aa13.12□□□□□ -0.31
GCN1-202ENST00000547263 POLR3DP05423 398 aaPredicted RBP13.12□□□□□ -0.31
GCN1-202ENST00000547263 GSPT1P15170 499 aaKnown RBP13.12□□□□□ -0.31
GCN1-202ENST00000547263 CERKLQ49MI3 558 aaPredicted RBP13.12□□□□□ -0.31
GCN1-202ENST00000547263 FASTKD5Q7L8L6 764 aaKnown RBP13.12□□□□□ -0.31
GCN1-202ENST00000547263 IFNL3Q8IZI9 196 aa13.12□□□□□ -0.31
GCN1-202ENST00000547263 ZNF296Q8WUU4 475 aaPredicted RBP13.12□□□□□ -0.31
GCN1-202ENST00000547263 C12orf42Q96LP6 360 aa13.12□□□□□ -0.31
GCN1-202ENST00000547263 CYP2D7A0A087X1C5 515 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 A0A0D9SFI3 127 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 GDF11O95390 407 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 CDK8P49336 464 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 BACE1P56817 501 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 SPP2Q13103 211 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 ALX1Q15699 326 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 SLC4A8Q2Y0W8 1093 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 TTC22Q5TAA0 569 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 C17orf99Q6UX52 265 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 SLC44A5Q8NCS7 719 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 CCDC17Q96LX7 622 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 AS3MTQ9HBK9 375 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 AGTPBP1Q9UPW5 1226 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 RLFQ13129 1914 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 LAMA4Q16363 1823 aa13.11□□□□□ -0.31
GCN1-202ENST00000547263 C19orf81C9J6K1 198 aa13.1□□□□□ -0.31
GCN1-202ENST00000547263 GH2P01242 217 aa13.1□□□□□ -0.31
GCN1-202ENST00000547263 SDSP20132 328 aa13.1□□□□□ -0.31
GCN1-202ENST00000547263 CAP1Q01518 475 aa13.1□□□□□ -0.31
GCN1-202ENST00000547263 TAF1CQ15572 869 aaPredicted RBP13.1□□□□□ -0.31
GCN1-202ENST00000547263 ABCB5Q2M3G0 1257 aa13.1□□□□□ -0.31
GCN1-202ENST00000547263 MCMDC2Q4G0Z9 681 aa13.1□□□□□ -0.31
GCN1-202ENST00000547263 CENPQQ7L2Z9 268 aaPredicted RBP13.1□□□□□ -0.31
GCN1-202ENST00000547263 SIAH1Q8IUQ4 282 aa13.1□□□□□ -0.31
GCN1-202ENST00000547263 DYNLL2Q96FJ2 89 aa13.1□□□□□ -0.31
GCN1-202ENST00000547263 FAM227BQ96M60 508 aa13.1□□□□□ -0.31
GCN1-202ENST00000547263 KIAA1683Q9H0B3 1180 aa13.1□□□□□ -0.31
GCN1-202ENST00000547263 ZFYVE28Q9HCC9 887 aa13.1□□□□□ -0.31
GCN1-202ENST00000547263 PARP14Q460N5 1801 aa13.1□□□□□ -0.31
GCN1-202ENST00000547263 PDHXO00330 501 aa13.09□□□□□ -0.31
GCN1-202ENST00000547263 MGAMO43451 1857 aa13.09□□□□□ -0.31
GCN1-202ENST00000547263 FKTNO75072 461 aa13.09□□□□□ -0.31
GCN1-202ENST00000547263 FGRP09769 529 aa13.09□□□□□ -0.31
GCN1-202ENST00000547263 BCRP11274 1271 aa13.09□□□□□ -0.31
GCN1-202ENST00000547263 HOXA7P31268 230 aaPredicted RBP13.09□□□□□ -0.31
GCN1-202ENST00000547263 NMIQ13287 307 aaPredicted RBP13.09□□□□□ -0.31
GCN1-202ENST00000547263 VPS53Q5VIR6 699 aa13.09□□□□□ -0.31
GCN1-202ENST00000547263 ZNF589Q86UQ0 364 aaPredicted RBP13.09□□□□□ -0.31
GCN1-202ENST00000547263 DDRGK1Q96HY6 314 aa13.09□□□□□ -0.31
GCN1-202ENST00000547263 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.09□□□□□ -0.31
GCN1-202ENST00000547263 TRIM34Q9BYJ4 488 aa13.09□□□□□ -0.31
GCN1-202ENST00000547263 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.09□□□□□ -0.31
GCN1-202ENST00000547263 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
GCN1-202ENST00000547263 ZSWIM8A7E2V4 1837 aa13.09□□□□□ -0.31
GCN1-202ENST00000547263 PLIN4Q96Q06 1357 aa13.08□□□□□ -0.31
GCN1-202ENST00000547263 IGKV6D-41A0A0C4DH26 115 aa13.08□□□□□ -0.32
GCN1-202ENST00000547263 TRIM75PA6NK02 468 aa13.08□□□□□ -0.32
GCN1-202ENST00000547263 USP17L10C9JJH3 530 aa13.08□□□□□ -0.32
GCN1-202ENST00000547263 RASA1P20936 1047 aa13.08□□□□□ -0.32
GCN1-202ENST00000547263 TREML2Q5T2D2 321 aa13.08□□□□□ -0.32
GCN1-202ENST00000547263 CCDC129Q6ZRS4 1044 aa13.08□□□□□ -0.32
GCN1-202ENST00000547263 TMEM179Q6ZVK1 233 aa13.08□□□□□ -0.32
GCN1-202ENST00000547263 CTU1Q7Z7A3 348 aaKnown RBP13.08□□□□□ -0.32
GCN1-202ENST00000547263 AMOTL1Q8IY63 956 aa13.08□□□□□ -0.32
GCN1-202ENST00000547263 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
GCN1-202ENST00000547263 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.08□□□□□ -0.32
GCN1-202ENST00000547263 CCDC171Q6TFL3 1326 aa13.08□□□□□ -0.32
GCN1-202ENST00000547263 A0A0G2JMZ2 1700 aa13.08□□□□□ -0.32
GCN1-202ENST00000547263 A0A1W2PRG0 241 aa13.07□□□□□ -0.32
GCN1-202ENST00000547263 TRIM6-TRIM34B2RNG4 842 aa13.07□□□□□ -0.32
GCN1-202ENST00000547263 HIP1O00291 1037 aa13.07□□□□□ -0.32
GCN1-202ENST00000547263 HSPD1P10809 573 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms