RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 HMGB1P09429 215 aaKnown RBP19.26■□□□□ 0.67
PPP1CA-211ENST00000546202 COL9A3Q14050 684 aaPredicted RBP19.26■□□□□ 0.67
PPP1CA-211ENST00000546202 RALYLQ86SE5 291 aaKnown RBP19.26■□□□□ 0.67
PPP1CA-211ENST00000546202 CDCA5Q96FF9 252 aa19.26■□□□□ 0.67
PPP1CA-211ENST00000546202 TRIM34Q9BYJ4 488 aa19.26■□□□□ 0.67
PPP1CA-211ENST00000546202 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.26■□□□□ 0.67
PPP1CA-211ENST00000546202 MKNK2Q9HBH9 465 aa19.26■□□□□ 0.67
PPP1CA-211ENST00000546202 PASKQ96RG2 1323 aa19.25■□□□□ 0.67
PPP1CA-211ENST00000546202 TRPM7Q96QT4 1865 aa19.25■□□□□ 0.67
PPP1CA-211ENST00000546202 VEGFBP49765 207 aa19.25■□□□□ 0.67
PPP1CA-211ENST00000546202 DCAF15Q66K64 600 aa19.25■□□□□ 0.67
PPP1CA-211ENST00000546202 DLK2Q6UY11 383 aa19.25■□□□□ 0.67
PPP1CA-211ENST00000546202 ESR2Q92731 530 aa19.25■□□□□ 0.67
PPP1CA-211ENST00000546202 KDM4AO75164 1064 aa19.24■□□□□ 0.67
PPP1CA-211ENST00000546202 SLC34A2O95436 690 aa19.24■□□□□ 0.67
PPP1CA-211ENST00000546202 CASTP20810 708 aaKnown RBP19.24■□□□□ 0.67
PPP1CA-211ENST00000546202 RABEP1Q15276 862 aa19.24■□□□□ 0.67
PPP1CA-211ENST00000546202 RRP12Q5JTH9 1297 aaKnown RBP19.24■□□□□ 0.67
PPP1CA-211ENST00000546202 BLOC1S2Q6QNY1 142 aa19.24■□□□□ 0.67
PPP1CA-211ENST00000546202 RUFY3Q7L099 469 aa19.24■□□□□ 0.67
PPP1CA-211ENST00000546202 MIGA2Q7L4E1 593 aa19.24■□□□□ 0.67
PPP1CA-211ENST00000546202 DHX32Q7L7V1 743 aaKnown RBP19.24■□□□□ 0.67
PPP1CA-211ENST00000546202 ZNF444Q8N0Y2 327 aaPredicted RBP19.24■□□□□ 0.67
PPP1CA-211ENST00000546202 CCDC17Q96LX7 622 aa19.24■□□□□ 0.67
PPP1CA-211ENST00000546202 TOMM22Q9NS69 142 aa19.24■□□□□ 0.67
PPP1CA-211ENST00000546202 DOCK1Q14185 1865 aa19.24■□□□□ 0.67
PPP1CA-211ENST00000546202 WDR19Q8NEZ3 1342 aa19.24■□□□□ 0.67
PPP1CA-211ENST00000546202 PLIN4Q96Q06 1357 aa19.23■□□□□ 0.67
PPP1CA-211ENST00000546202 OTOFQ9HC10 1997 aa19.23■□□□□ 0.67
PPP1CA-211ENST00000546202 PHF20L1A8MW92 1017 aa19.23■□□□□ 0.67
PPP1CA-211ENST00000546202 RANBP6O60518 1105 aaKnown RBP19.23■□□□□ 0.67
PPP1CA-211ENST00000546202 RPS6KB1P23443 525 aa19.23■□□□□ 0.67
PPP1CA-211ENST00000546202 MCM5P33992 734 aa19.23■□□□□ 0.67
PPP1CA-211ENST00000546202 CTCFP49711 727 aaPredicted RBP19.23■□□□□ 0.67
PPP1CA-211ENST00000546202 ANTXR2P58335 489 aa19.23■□□□□ 0.67
PPP1CA-211ENST00000546202 EXOSC10Q01780 885 aaKnown RBP19.23■□□□□ 0.67
PPP1CA-211ENST00000546202 CYB5R4Q7L1T6 521 aa19.23■□□□□ 0.67
PPP1CA-211ENST00000546202 ZNF341Q9BYN7 854 aa19.23■□□□□ 0.67
PPP1CA-211ENST00000546202 UPF3BQ9BZI7 483 aaKnown RBP19.23■□□□□ 0.67
PPP1CA-211ENST00000546202 ZSWIM5Q9P217 1185 aa19.23■□□□□ 0.67
PPP1CA-211ENST00000546202 CYP46A1Q9Y6A2 500 aa19.23■□□□□ 0.67
PPP1CA-211ENST00000546202 ITGBL1O95965 494 aaPredicted RBP19.22■□□□□ 0.67
PPP1CA-211ENST00000546202 CPA1P15085 419 aa19.22■□□□□ 0.67
PPP1CA-211ENST00000546202 LBX1P52954 281 aa19.22■□□□□ 0.67
PPP1CA-211ENST00000546202 TFAP4Q01664 338 aa19.22■□□□□ 0.67
PPP1CA-211ENST00000546202 RRP1BQ14684 758 aaKnown RBP19.22■□□□□ 0.67
PPP1CA-211ENST00000546202 CERKLQ49MI3 558 aaPredicted RBP19.22■□□□□ 0.67
PPP1CA-211ENST00000546202 FAM47AQ5JRC9 791 aa19.22■□□□□ 0.67
PPP1CA-211ENST00000546202 IL27Q8NEV9 243 aa19.22■□□□□ 0.67
PPP1CA-211ENST00000546202 NEDD1Q8NHV4 660 aa19.22■□□□□ 0.67
PPP1CA-211ENST00000546202 WBP1LQ9NX94 342 aa19.22■□□□□ 0.67
PPP1CA-211ENST00000546202 ZNF112Q9UJU3 913 aa19.22■□□□□ 0.67
PPP1CA-211ENST00000546202 TSPY2A6NKD2 308 aa19.21■□□□□ 0.67
PPP1CA-211ENST00000546202 TRAF5O00463 557 aa19.21■□□□□ 0.67
PPP1CA-211ENST00000546202 PRC1O43663 620 aa19.21■□□□□ 0.67
PPP1CA-211ENST00000546202 AKR1B1P15121 316 aa19.21■□□□□ 0.67
PPP1CA-211ENST00000546202 NF2P35240 595 aa19.21■□□□□ 0.67
PPP1CA-211ENST00000546202 TTC14Q96N46 770 aa19.21■□□□□ 0.67
PPP1CA-211ENST00000546202 MTA3Q9BTC8 594 aa19.21■□□□□ 0.67
PPP1CA-211ENST00000546202 TSHZ2Q9NRE2 1034 aa19.21■□□□□ 0.67
PPP1CA-211ENST00000546202 TMEM88BA6NKF7 163 aa19.2■□□□□ 0.66
PPP1CA-211ENST00000546202 USP2O75604 605 aaPredicted RBP19.2■□□□□ 0.66
PPP1CA-211ENST00000546202 TSPY3P0CV98 308 aa19.2■□□□□ 0.66
PPP1CA-211ENST00000546202 TSPY8P0CW00 308 aa19.2■□□□□ 0.66
PPP1CA-211ENST00000546202 NEK4P51957 841 aa19.2■□□□□ 0.66
PPP1CA-211ENST00000546202 FBXL16Q8N461 479 aa19.2■□□□□ 0.66
PPP1CA-211ENST00000546202 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.2■□□□□ 0.66
PPP1CA-211ENST00000546202 ALDH8A1Q9H2A2 487 aaPredicted RBP19.2■□□□□ 0.66
PPP1CA-211ENST00000546202 TCP11L1Q9NUJ3 509 aa19.2■□□□□ 0.66
PPP1CA-211ENST00000546202 MYH4Q9Y623 1939 aa19.19■□□□□ 0.66
PPP1CA-211ENST00000546202 IGKV6D-41A0A0C4DH26 115 aa19.19■□□□□ 0.66
PPP1CA-211ENST00000546202 CAP2P40123 477 aa19.19■□□□□ 0.66
PPP1CA-211ENST00000546202 JAG1P78504 1218 aa19.19■□□□□ 0.66
PPP1CA-211ENST00000546202 ABCB5Q2M3G0 1257 aa19.19■□□□□ 0.66
PPP1CA-211ENST00000546202 CHST3Q7LGC8 479 aa19.19■□□□□ 0.66
PPP1CA-211ENST00000546202 TMEM87BQ96K49 555 aa19.19■□□□□ 0.66
PPP1CA-211ENST00000546202 GINM1Q9NU53 330 aa19.19■□□□□ 0.66
PPP1CA-211ENST00000546202 PPP1R12BO60237 982 aaPredicted RBP19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 CTNND1O60716 968 aaKnown RBP19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 GDF11O95390 407 aa19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 FMR1Q06787 632 aaKnown RBP eCLIP19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 MAP3K11Q16584 847 aa19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 SHROOM1Q2M3G4 852 aaPredicted RBP19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 TMEM179Q6ZVK1 233 aa19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 IQCA1Q86XH1 822 aa19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 IGDCC4Q8TDY8 1250 aa19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 TCEANC2Q96MN5 208 aa19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 ZSCAN10Q96SZ4 725 aaPredicted RBP19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 AGXT2Q9BYV1 514 aa19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 IL17RBQ9NRM6 502 aa19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 PDRG1Q9NUG6 133 aa19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 FZD1Q9UP38 647 aa19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 PHIPQ8WWQ0 1821 aa19.18■□□□□ 0.66
PPP1CA-211ENST00000546202 INPP5BP32019 993 aa19.17■□□□□ 0.66
PPP1CA-211ENST00000546202 GUCY1A2P33402 732 aa19.17■□□□□ 0.66
PPP1CA-211ENST00000546202 NOVP48745 357 aa19.17■□□□□ 0.66
PPP1CA-211ENST00000546202 SART3Q15020 963 aaKnown RBP19.17■□□□□ 0.66
PPP1CA-211ENST00000546202 SEC23AQ15436 765 aa19.17■□□□□ 0.66
PPP1CA-211ENST00000546202 CCDC178Q5BJE1 867 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms