RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 SWAP70Q9UH65 585 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 A0A0D9SFI3 127 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 GPR161Q8N6U8 529 aaKnown RBP13.98□□□□□ -0.17
COL4A6-209ENST00000545689 UBL4BQ8N7F7 174 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 NT5C3AQ9H0P0 336 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 KDM3AQ9Y4C1 1321 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
COL4A6-209ENST00000545689 PTH1RQ03431 593 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 TICAM2Q86XR7 235 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 NOSTRINQ8IVI9 506 aa13.98□□□□□ -0.17
COL4A6-209ENST00000545689 CPLX4Q7Z7G2 160 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 CABP7Q86V35 215 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 TCHPQ9BT92 498 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 NLRP1Q9C000 1473 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 GPCPD1Q9NPB8 672 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 OTUD7BQ6GQQ9 843 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 RGS22Q8NE09 1264 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 EAF2Q96CJ1 260 aaPredicted RBP13.97□□□□□ -0.17
COL4A6-209ENST00000545689 CEP63Q96MT8 703 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 A0A1W2PQ27 194 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 A0A1W2PQ64 194 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 A0A1W2PQD8 194 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 PFKFB1P16118 471 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 ZBTB38Q8NAP3 1195 aaPredicted RBP13.97□□□□□ -0.17
COL4A6-209ENST00000545689 KIAA1524Q8TCG1 905 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 PHKBQ93100 1093 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 ZMYND15Q9H091 742 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 VEZTQ9HBM0 779 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 HECW2Q9P2P5 1572 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 DDAH1O94760 285 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 CCNL1Q9UK58 526 aaPredicted RBP13.97□□□□□ -0.17
COL4A6-209ENST00000545689 TPCN1Q9ULQ1 816 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 CALCRLQ16602 461 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 ZNF654Q8IZM8 581 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 SNX29Q8TEQ0 813 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 MAP4K1Q92918 833 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 CARD6Q9BX69 1037 aa13.97□□□□□ -0.17
COL4A6-209ENST00000545689 ZNF853P0CG23 659 aa13.96□□□□□ -0.17
COL4A6-209ENST00000545689 DNAJC10Q8IXB1 793 aa13.96□□□□□ -0.17
COL4A6-209ENST00000545689 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.96□□□□□ -0.17
COL4A6-209ENST00000545689 PTCH1Q13635 1447 aa13.96□□□□□ -0.17
COL4A6-209ENST00000545689 TXKP42681 527 aa13.96□□□□□ -0.17
COL4A6-209ENST00000545689 NBPF14Q5TI25 921 aa13.96□□□□□ -0.17
COL4A6-209ENST00000545689 RIMBP2O15034 1052 aa13.96□□□□□ -0.17
COL4A6-209ENST00000545689 HSPD1P10809 573 aaKnown RBP13.96□□□□□ -0.17
COL4A6-209ENST00000545689 ARID4AP29374 1257 aaPredicted RBP13.96□□□□□ -0.17
COL4A6-209ENST00000545689 ALDH3A1P30838 453 aa13.96□□□□□ -0.17
COL4A6-209ENST00000545689 WHAMMP3Q1A5X7 153 aa13.96□□□□□ -0.17
COL4A6-209ENST00000545689 AATFQ9NY61 560 aaKnown RBP eCLIP13.96□□□□□ -0.17
COL4A6-209ENST00000545689 TFCP2L1Q9NZI6 479 aa13.96□□□□□ -0.17
COL4A6-209ENST00000545689 UTP11Q9Y3A2 253 aaKnown RBP13.96□□□□□ -0.17
COL4A6-209ENST00000545689 STX10O60499 249 aa13.96□□□□□ -0.17
COL4A6-209ENST00000545689 KRT9P35527 623 aa13.96□□□□□ -0.17
COL4A6-209ENST00000545689 LIN9Q5TKA1 542 aa13.96□□□□□ -0.17
COL4A6-209ENST00000545689 PAIP2Q9BPZ3 127 aaKnown RBP13.96□□□□□ -0.17
COL4A6-209ENST00000545689 USP6P35125 1406 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 IBSPP21815 317 aaPredicted RBP13.95□□□□□ -0.18
COL4A6-209ENST00000545689 SETDB1Q15047 1291 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 UBE3CQ15386 1083 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 UBLCP1Q8WVY7 318 aaPredicted RBP13.95□□□□□ -0.18
COL4A6-209ENST00000545689 JDP2Q8WYK2 163 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 ZSCAN10Q96SZ4 725 aaPredicted RBP13.95□□□□□ -0.18
COL4A6-209ENST00000545689 KCNG1Q9UIX4 513 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 PALD1Q9ULE6 856 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 DNM3Q9UQ16 869 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 TTC31Q49AM3 519 aaPredicted RBP13.95□□□□□ -0.18
COL4A6-209ENST00000545689 MICALL1Q8N3F8 863 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 XPO4Q9C0E2 1151 aaKnown RBP13.95□□□□□ -0.18
COL4A6-209ENST00000545689 UBAP1LF5GYI3 381 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 MTMR3Q13615 1198 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 CCDC6Q16204 474 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 RBM26Q5T8P6 1007 aaKnown RBP13.95□□□□□ -0.18
COL4A6-209ENST00000545689 SMC6Q96SB8 1091 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 MAGEF1Q9HAY2 307 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 TAB2Q9NYJ8 693 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 FLOT1O75955 427 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 PLCB3Q01970 1234 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 BRD3Q15059 726 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 RUFY4Q6ZNE9 571 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 SUPT20HQ8NEM7 779 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 SERTAD1Q9UHV2 236 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 PABPN1LA6NDY0 278 aaKnown RBP13.95□□□□□ -0.18
COL4A6-209ENST00000545689 PAK2Q13177 524 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 IFNL3Q8IZI9 196 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 FNBP1Q96RU3 617 aa13.95□□□□□ -0.18
COL4A6-209ENST00000545689 ELF2Q15723 593 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 CCDC14Q49A88 953 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 HOOK2Q96ED9 719 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 ATP10DQ9P241 1426 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 MTX1Q13505 466 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 NKIRAS1Q9NYS0 192 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 KCNJ14Q9UNX9 436 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 ARHGEF35A5YM69 484 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 TAF5LO75529 589 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 SFMBT2Q5VUG0 894 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 REXO1Q8N1G1 1221 aaKnown RBP13.94□□□□□ -0.18
COL4A6-209ENST00000545689 MYL10Q9BUA6 226 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 ATP8A2Q9NTI2 1148 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 COMMD10Q9Y6G5 202 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 ATP2C2O75185 946 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms