RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 STX8Q9UNK0 236 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 N4BP2Q86UW6 1770 aaPredicted RBP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 RPS6KA4O75676 772 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 CDKL5O76039 1030 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 UFL1O94874 794 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 DEXIO95424 95 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 TFAP4Q01664 338 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 UBE4AQ14139 1066 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 ZNF710Q8N1W2 664 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 FBXO2Q9UK22 296 aaPredicted RBP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 NUP188Q5SRE5 1749 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 U2AF2P26368 475 aaKnown RBP eCLIP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 SEC23AQ15436 765 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 TOM1O60784 492 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 BMP6P22004 513 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 NLRP12P59046 1061 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 AKAP17AQ02040 695 aaKnown RBP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 TRAPPC3LQ5T215 181 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 ESR2Q92731 530 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 SMARCC1Q92922 1105 aaPredicted RBP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 IL17RBQ9NRM6 502 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 SAMSN1Q9NSI8 373 aaKnown RBP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 FANCLQ9NW38 375 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 PCDHAC2Q9Y5I4 1007 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 A0A0U1RQJ8 604 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 KRBA2Q6ZNG9 492 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 ATRIPQ8WXE1 791 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 CDCA7Q9BWT1 371 aaPredicted RBP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 KCNH3Q9ULD8 1083 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 FAM196BA6NMK8 535 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 CDK11BP21127 795 aaKnown RBP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 SCNN1DP51172 638 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 IFNAR1P17181 557 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 CMA1P23946 247 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 NLRP5P59047 1200 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 CBX1P83916 185 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 SF3B3Q15393 1217 aaKnown RBP4.33□□□□□ -1.72
BRCA2-206ENST00000544455 AK9Q5TCS8 1911 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 SEPT12Q8IYM1 358 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 LRRN4CLQ8ND94 238 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 NARFQ9UHQ1 456 aa4.33□□□□□ -1.72
BRCA2-206ENST00000544455 FAM205AQ6ZU69 1335 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 TPM2P07951 284 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 ADKP55263 362 aaKnown RBP4.32□□□□□ -1.72
BRCA2-206ENST00000544455 CCZ1BP86790 482 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 CCZ1P86791 482 aaPredicted RBP4.32□□□□□ -1.72
BRCA2-206ENST00000544455 SAFBQ15424 915 aaKnown RBP eCLIP4.32□□□□□ -1.72
BRCA2-206ENST00000544455 CFAP100Q494V2 611 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 RESP18Q5W5W9 173 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 ARMCX5Q6P1M9 558 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 IQCA1Q86XH1 822 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 CNBD1Q8NA66 436 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 SYMPKQ92797 1274 aaKnown RBP4.32□□□□□ -1.72
BRCA2-206ENST00000544455 FANCCQ00597 558 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 NCAPHQ15003 741 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 HEATR3Q7Z4Q2 680 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 CRNKL1Q9BZJ0 848 aaKnown RBP4.32□□□□□ -1.72
BRCA2-206ENST00000544455 RNF41Q9H4P4 317 aaPredicted RBP4.32□□□□□ -1.72
BRCA2-206ENST00000544455 CICQ96RK0 1608 aaPredicted RBP4.32□□□□□ -1.72
BRCA2-206ENST00000544455 ABCA3Q99758 1704 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 PNPLA7Q6ZV29 1317 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 HSPA1LP34931 641 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 PRR5LQ6MZQ0 368 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 HSD3B7Q9H2F3 369 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 IGSF3O75054 1194 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 CACNB3P54284 484 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 FBXO33Q7Z6M2 555 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 KRI1Q8N9T8 703 aaKnown RBP4.32□□□□□ -1.72
BRCA2-206ENST00000544455 UBE2Q2Q8WVN8 375 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 AFF2P51816 1311 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 C6orf229H3BNL8 230 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 LIFRP42702 1097 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 FBXL16Q8N461 479 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 MAN1B1Q9UKM7 699 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 HPSEQ9Y251 543 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 FRMPD2Q68DX3 1309 aaPredicted RBP4.32□□□□□ -1.72
BRCA2-206ENST00000544455 SERPINB2P05120 415 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 CD44P16070 742 aaKnown RBP4.32□□□□□ -1.72
BRCA2-206ENST00000544455 GNAT2P19087 354 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 BTDP43251 543 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 SAMD1Q6SPF0 538 aaPredicted RBP4.32□□□□□ -1.72
BRCA2-206ENST00000544455 RPGRQ92834 1020 aaKnown RBP4.32□□□□□ -1.72
BRCA2-206ENST00000544455 GJA10Q969M2 543 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 MED15Q96RN5 788 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 PHF20Q9BVI0 1012 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 LAMB4A4D0S4 1761 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 TROAPQ12815 778 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 IL17AQ16552 155 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 SHROOM1Q2M3G4 852 aaPredicted RBP4.32□□□□□ -1.72
BRCA2-206ENST00000544455 MKNK2Q9HBH9 465 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 ATRNO75882 1429 aa4.32□□□□□ -1.72
BRCA2-206ENST00000544455 PPP6R2O75170 966 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 LDHBP07195 334 aaKnown RBP4.31□□□□□ -1.72
BRCA2-206ENST00000544455 MDM2Q00987 491 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-206ENST00000544455 FUT2Q10981 343 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 ALX1Q15699 326 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 SLC35G1Q2M3R5 365 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 CLEC4GQ6UXB4 293 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 POLLQ9UGP5 575 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms