RNA–Protein interactions for RNA: ENST00000542643.6

RAP1GAP-212, Transcript of RAP1 GTPase activating protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAP1GAP, Length 3,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GAP-212ENST00000542643 CDC27P30260 824 aa11.67□□□□□ -0.54
RAP1GAP-212ENST00000542643 EIF4A1P60842 406 aaKnown RBP11.67□□□□□ -0.54
RAP1GAP-212ENST00000542643 PPP2R5AQ15172 486 aa11.67□□□□□ -0.54
RAP1GAP-212ENST00000542643 DHX32Q7L7V1 743 aaKnown RBP11.67□□□□□ -0.54
RAP1GAP-212ENST00000542643 CARMIL3Q8ND23 1372 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 RAD9BQ6WBX8 426 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 SUGP1Q8IWZ8 645 aaKnown RBP11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 PIGBQ92521 554 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 KAT14Q9H8E8 782 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 HOOK1Q9UJC3 728 aaKnown RBP11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 U3KPZ7 1027 aaPredicted RBP11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 PXDNLA1KZ92 1463 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 A0A1W2PQ27 194 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 A0A1W2PQ64 194 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 A0A1W2PQD8 194 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 MYO1FO00160 1098 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 MYSM1Q5VVJ2 828 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 ANO1Q5XXA6 986 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 GRAMD1CQ8IYS0 662 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 PCDHA5Q9Y5H7 936 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 USP42Q9H9J4 1324 aaKnown RBP11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 SRCAPQ6ZRS2 3230 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 RDXP35241 583 aaKnown RBP11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 MRPS25P82663 173 aaKnown RBP11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 HSP90AB3PQ58FF7 597 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 SUCLG2Q96I99 432 aa11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 LLPHQ9BRT6 129 aaKnown RBP11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 SAMSN1Q9NSI8 373 aaKnown RBP11.66□□□□□ -0.54
RAP1GAP-212ENST00000542643 SHTN1A0MZ66 631 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 KIF28PB7ZC32 967 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 AKR1B15C9JRZ8 316 aaPredicted RBP11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 ALDH1L1O75891 902 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 PDIA3P30101 505 aaKnown RBP11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 GGCXP38435 758 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 STIM1Q13586 685 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 CNPY4Q8N129 248 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 CCDC148Q8NFR7 591 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 AIFM3Q96NN9 605 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 SLC4A9Q96Q91 983 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 CD248Q9HCU0 757 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 DDX60Q8IY21 1712 aaKnown RBP11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 RXRAP19793 462 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 USP8P40818 1118 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 RNF187Q5TA31 235 aaPredicted RBP11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 FAM76AQ8TAV0 307 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 CAGE1Q8TC20 777 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 HNRNPLLQ8WVV9 542 aaKnown RBP11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 SLC24A3Q9HC58 644 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 DONSONQ9NYP3 566 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 COL15A1P39059 1388 aa11.65□□□□□ -0.54
RAP1GAP-212ENST00000542643 GOLGA8BA8MQT2 603 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 TEX33O43247 280 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 RPS6KA5O75582 802 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 GNGT1P63211 74 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 C1orf141Q5JVX7 400 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 CPLX2Q6PUV4 134 aaKnown RBP11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 RPAINQ86UA6 219 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 ZNF622Q969S3 477 aaKnown RBP eCLIP11.64□□□□□ -0.559e-7■■□□□ 11.4
RAP1GAP-212ENST00000542643 CEP89Q96ST8 783 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 FAM107BQ9H098 131 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 MED4Q9NPJ6 270 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 GUCA1BQ9UMX6 200 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 KIAA1551Q9HCM1 1747 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 GOLGA6CA6NDK9 693 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 SRGAP2O75044 1071 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 A1BGP04217 495 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 SSBP05455 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 GOLGA6DP0CG33 693 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 FDPSP14324 419 aaKnown RBP11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 FMR1Q06787 632 aaKnown RBP eCLIP11.64□□□□□ -0.553e-7■■■□□ 15.5
RAP1GAP-212ENST00000542643 RBL2Q08999 1139 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 KCNV1Q6PIU1 500 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 NAPGQ99747 312 aaPredicted RBP11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 GOLGA6AQ9NYA3 693 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 HDAC6Q9UBN7 1215 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 NEDD4P46934 1319 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 A0A1B0GUL6 1792 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 ZEB2O60315 1214 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 KIAA0754O94854 1291 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 ZNF790Q6PG37 636 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 NEUROD6Q96NK8 337 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 ADGRG1Q9Y653 693 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 MED23Q9ULK4 1368 aa11.64□□□□□ -0.55
RAP1GAP-212ENST00000542643 PES1O00541 588 aaKnown RBP11.63□□□□□ -0.55
RAP1GAP-212ENST00000542643 SYF2O95926 243 aaKnown RBP11.63□□□□□ -0.55
RAP1GAP-212ENST00000542643 PDE6BP35913 854 aa11.63□□□□□ -0.55
RAP1GAP-212ENST00000542643 MCMDC2Q4G0Z9 681 aa11.63□□□□□ -0.55
RAP1GAP-212ENST00000542643 ATL3Q6DD88 541 aa11.63□□□□□ -0.55
RAP1GAP-212ENST00000542643 KRT27Q7Z3Y8 459 aa11.63□□□□□ -0.55
RAP1GAP-212ENST00000542643 RAB21Q9UL25 225 aa11.63□□□□□ -0.55
RAP1GAP-212ENST00000542643 DLEC1Q9Y238 1755 aa11.63□□□□□ -0.55
RAP1GAP-212ENST00000542643 KLF18A0A0U1RQI7 1052 aa11.63□□□□□ -0.55
RAP1GAP-212ENST00000542643 CMA1P23946 247 aa11.63□□□□□ -0.55
RAP1GAP-212ENST00000542643 PROSER3Q2NL68 480 aa11.63□□□□□ -0.55
RAP1GAP-212ENST00000542643 MSANTD4Q8NCY6 345 aa11.63□□□□□ -0.55
RAP1GAP-212ENST00000542643 SLF1Q9BQI6 1058 aa11.63□□□□□ -0.55
RAP1GAP-212ENST00000542643 ALDH8A1Q9H2A2 487 aaPredicted RBP11.63□□□□□ -0.55
RAP1GAP-212ENST00000542643 GOLIM4O00461 696 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms