RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ZNRF3Q9ULT6 936 aa19.69■□□□□ 0.74
COPS3-212ENST00000539941 H3BQV1 296 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 VIL1P09327 827 aaKnown RBP19.68■□□□□ 0.74
COPS3-212ENST00000539941 IFFO2Q5TF58 517 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 RSBN1LQ6PCB5 846 aaPredicted RBP19.68■□□□□ 0.74
COPS3-212ENST00000539941 CDC37L1Q7L3B6 337 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 TAOK3Q9H2K8 898 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 TCP11L1Q9NUJ3 509 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 TAOK2Q9UL54 1235 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 TRAK2O60296 914 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 DTNBO60941 627 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 DDAH1O94760 285 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 TPM2P07951 284 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 CALM1P0DP23 149 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 CALM2P0DP24 149 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 CALM3P0DP25 149 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 FDPSP14324 419 aaKnown RBP19.68■□□□□ 0.74
COPS3-212ENST00000539941 RTN1Q16799 776 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 ARHGAP27Q6ZUM4 889 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 CATIPQ7Z7H3 387 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 RAB11FIP4Q86YS3 637 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 ZNF444Q8N0Y2 327 aaPredicted RBP19.68■□□□□ 0.74
COPS3-212ENST00000539941 DYNLL2Q96FJ2 89 aa19.68■□□□□ 0.74
COPS3-212ENST00000539941 ORC3Q9UBD5 711 aaPredicted RBP19.68■□□□□ 0.74
COPS3-212ENST00000539941 STK36Q9NRP7 1315 aa19.67■□□□□ 0.74
COPS3-212ENST00000539941 LTBP3Q9NS15 1303 aa19.67■□□□□ 0.74
COPS3-212ENST00000539941 COL4A5P29400 1685 aa19.67■□□□□ 0.74
COPS3-212ENST00000539941 CDC27P30260 824 aa19.67■□□□□ 0.74
COPS3-212ENST00000539941 ADD1P35611 737 aaKnown RBP19.67■□□□□ 0.74
COPS3-212ENST00000539941 ANKS1AQ92625 1134 aa19.67■□□□□ 0.74
COPS3-212ENST00000539941 ZSCAN16Q9H4T2 348 aaPredicted RBP19.67■□□□□ 0.74
COPS3-212ENST00000539941 FAM217BQ9NTX9 383 aaPredicted RBP19.67■□□□□ 0.74
COPS3-212ENST00000539941 IFNAR1P17181 557 aa19.66■□□□□ 0.74
COPS3-212ENST00000539941 CDK8P49336 464 aa19.66■□□□□ 0.74
COPS3-212ENST00000539941 TFAP4Q01664 338 aa19.66■□□□□ 0.74
COPS3-212ENST00000539941 NTRK3Q16288 839 aa19.66■□□□□ 0.74
COPS3-212ENST00000539941 FAM47AQ5JRC9 791 aa19.66■□□□□ 0.74
COPS3-212ENST00000539941 DGKHQ86XP1 1220 aa19.66■□□□□ 0.74
COPS3-212ENST00000539941 IDI2Q9BXS1 227 aa19.66■□□□□ 0.74
COPS3-212ENST00000539941 OSBPL5Q9H0X9 879 aaPredicted RBP19.66■□□□□ 0.74
COPS3-212ENST00000539941 LMBRD1Q9NUN5 540 aa19.66■□□□□ 0.74
COPS3-212ENST00000539941 RXRAP19793 462 aa19.65■□□□□ 0.74
COPS3-212ENST00000539941 RASA1P20936 1047 aa19.65■□□□□ 0.74
COPS3-212ENST00000539941 RBM5P52756 815 aaKnown RBP eCLIP19.65■□□□□ 0.74
COPS3-212ENST00000539941 PICALMQ13492 652 aa19.65■□□□□ 0.74
COPS3-212ENST00000539941 SLC4A8Q2Y0W8 1093 aa19.65■□□□□ 0.74
COPS3-212ENST00000539941 FANCBQ8NB91 859 aa19.65■□□□□ 0.74
COPS3-212ENST00000539941 TMEM87AQ8NBN3 555 aa19.65■□□□□ 0.74
COPS3-212ENST00000539941 GMLQ99445 158 aa19.65■□□□□ 0.74
COPS3-212ENST00000539941 MYL10Q9BUA6 226 aa19.65■□□□□ 0.74
COPS3-212ENST00000539941 DDX4Q9NQI0 724 aaKnown RBP19.65■□□□□ 0.74
COPS3-212ENST00000539941 SWAP70Q9UH65 585 aa19.65■□□□□ 0.74
COPS3-212ENST00000539941 PSMD14O00487 310 aa19.65■□□□□ 0.74
COPS3-212ENST00000539941 TSPY3P0CV98 308 aa19.65■□□□□ 0.74
COPS3-212ENST00000539941 TSPY8P0CW00 308 aa19.65■□□□□ 0.74
COPS3-212ENST00000539941 AGBL3Q8NEM8 1001 aa19.65■□□□□ 0.74
COPS3-212ENST00000539941 RBM28Q9NW13 759 aaKnown RBP19.65■□□□□ 0.74
COPS3-212ENST00000539941 HDAC9Q9UKV0 1011 aa19.65■□□□□ 0.74
COPS3-212ENST00000539941 ARFGEF1Q9Y6D6 1849 aa19.64■□□□□ 0.74
COPS3-212ENST00000539941 GOLGA6L3A6NEY3 463 aa19.64■□□□□ 0.73
COPS3-212ENST00000539941 HLA-DOAP06340 250 aa19.64■□□□□ 0.73
COPS3-212ENST00000539941 GABPAQ06546 454 aa19.64■□□□□ 0.73
COPS3-212ENST00000539941 CSPP1Q1MSJ5 1256 aa19.64■□□□□ 0.73
COPS3-212ENST00000539941 EHD4Q9H223 541 aa19.64■□□□□ 0.73
COPS3-212ENST00000539941 DHX36Q9H2U1 1008 aaKnown RBP19.64■□□□□ 0.73
COPS3-212ENST00000539941 NFKBIEO00221 500 aa19.63■□□□□ 0.73
COPS3-212ENST00000539941 RAD17O75943 681 aa19.63■□□□□ 0.73
COPS3-212ENST00000539941 FMNL1O95466 1100 aaPredicted RBP19.63■□□□□ 0.73
COPS3-212ENST00000539941 MMP14P50281 582 aa19.63■□□□□ 0.73
COPS3-212ENST00000539941 TROAPQ12815 778 aa19.63■□□□□ 0.73
COPS3-212ENST00000539941 RESTQ13127 1097 aa19.63■□□□□ 0.73
COPS3-212ENST00000539941 CFAP100Q494V2 611 aa19.63■□□□□ 0.73
COPS3-212ENST00000539941 CCDC144CPQ8IYA2 1237 aa19.63■□□□□ 0.73
COPS3-212ENST00000539941 SLC44A5Q8NCS7 719 aa19.63■□□□□ 0.73
COPS3-212ENST00000539941 NEDD1Q8NHV4 660 aa19.63■□□□□ 0.73
COPS3-212ENST00000539941 NUP133Q8WUM0 1156 aa19.63■□□□□ 0.73
COPS3-212ENST00000539941 JDP2Q8WYK2 163 aa19.63■□□□□ 0.73
COPS3-212ENST00000539941 WASF1Q92558 559 aa19.63■□□□□ 0.73
COPS3-212ENST00000539941 C8orf76Q96K31 380 aa19.63■□□□□ 0.73
COPS3-212ENST00000539941 COL2A1P02458 1487 aaPredicted RBP19.63■□□□□ 0.73
COPS3-212ENST00000539941 PRPF40AO75400 957 aaKnown RBP19.62■□□□□ 0.73
COPS3-212ENST00000539941 SSRP1Q08945 709 aaKnown RBP19.62■□□□□ 0.73
COPS3-212ENST00000539941 KLHL40Q2TBA0 621 aa19.62■□□□□ 0.73
COPS3-212ENST00000539941 RCSD1Q6JBY9 416 aa19.62■□□□□ 0.73
COPS3-212ENST00000539941 TRIM22Q8IYM9 498 aa19.62■□□□□ 0.73
COPS3-212ENST00000539941 MAP3K14Q99558 947 aa19.62■□□□□ 0.73
COPS3-212ENST00000539941 SERPINB13Q9UIV8 391 aa19.62■□□□□ 0.73
COPS3-212ENST00000539941 TCHHQ07283 1943 aa19.62■□□□□ 0.73
COPS3-212ENST00000539941 PLIN4Q96Q06 1357 aa19.62■□□□□ 0.73
COPS3-212ENST00000539941 NMT2O60551 498 aa19.62■□□□□ 0.73
COPS3-212ENST00000539941 OGFOD1Q8N543 542 aa19.62■□□□□ 0.73
COPS3-212ENST00000539941 FBXO18Q8NFZ0 1043 aa19.62■□□□□ 0.73
COPS3-212ENST00000539941 IL17RBQ9NRM6 502 aa19.62■□□□□ 0.73
COPS3-212ENST00000539941 FSD2A1L4K1 749 aa19.61■□□□□ 0.73
COPS3-212ENST00000539941 ENTPD3O75355 529 aa19.61■□□□□ 0.73
COPS3-212ENST00000539941 C1QTNF8P60827 252 aa19.61■□□□□ 0.73
COPS3-212ENST00000539941 KRT85P78386 507 aa19.61■□□□□ 0.73
COPS3-212ENST00000539941 NFIAQ12857 509 aa19.61■□□□□ 0.73
COPS3-212ENST00000539941 FERMT3Q86UX7 667 aa19.61■□□□□ 0.73
COPS3-212ENST00000539941 CHAMP1Q96JM3 812 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms