RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 PDCL2Q8N4E4 241 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 SPATA5Q8NB90 893 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 CCDC112Q8NEF3 446 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 C7orf43Q8WVR3 580 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 CNNM2Q9H8M5 875 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.76■□□□□ 0.27
CDCA3-207ENST00000538862 TUBE1Q9UJT0 475 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 SLC5A1P13866 664 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 SYKP43405 635 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 TRIM29Q14134 588 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 IFNL3Q8IZI9 196 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 NKX2-3Q8TAU0 364 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 AIFM3Q96NN9 605 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 MAP3K14Q99558 947 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 GOLGA8AA7E2F4 631 aa16.75■□□□□ 0.27
CDCA3-207ENST00000538862 MARCKSP29966 332 aaPredicted RBP16.75■□□□□ 0.27
CDCA3-207ENST00000538862 ALDH1B1P30837 517 aa16.75■□□□□ 0.27
CDCA3-207ENST00000538862 NCAPHQ15003 741 aa16.75■□□□□ 0.27
CDCA3-207ENST00000538862 PTPN14Q15678 1187 aa16.75■□□□□ 0.27
CDCA3-207ENST00000538862 TMEM67Q5HYA8 995 aa16.75■□□□□ 0.27
CDCA3-207ENST00000538862 NFXL1Q6ZNB6 911 aa16.75■□□□□ 0.27
CDCA3-207ENST00000538862 MICU3Q86XE3 530 aa16.75■□□□□ 0.27
CDCA3-207ENST00000538862 CCDC150Q8NCX0 1101 aa16.75■□□□□ 0.27
CDCA3-207ENST00000538862 WASF1Q92558 559 aa16.75■□□□□ 0.27
CDCA3-207ENST00000538862 KRT23Q9C075 422 aa16.75■□□□□ 0.27
CDCA3-207ENST00000538862 FAM217BQ9NTX9 383 aaPredicted RBP16.75■□□□□ 0.27
CDCA3-207ENST00000538862 MROH7-TTC4A0A0A0MT08 1334 aa16.75■□□□□ 0.27
CDCA3-207ENST00000538862 NID2Q14112 1375 aa16.75■□□□□ 0.27
CDCA3-207ENST00000538862 KIF2AO00139 706 aaPredicted RBP16.74■□□□□ 0.27
CDCA3-207ENST00000538862 HOXA10P31260 410 aaPredicted RBP16.74■□□□□ 0.27
CDCA3-207ENST00000538862 GNL2Q13823 731 aaKnown RBP16.74■□□□□ 0.27
CDCA3-207ENST00000538862 CCAR2Q8N163 923 aaKnown RBP16.74■□□□□ 0.27
CDCA3-207ENST00000538862 PHKBQ93100 1093 aa16.74■□□□□ 0.27
CDCA3-207ENST00000538862 FBXW7Q969H0 707 aa16.74■□□□□ 0.27
CDCA3-207ENST00000538862 MTA3Q9BTC8 594 aa16.74■□□□□ 0.27
CDCA3-207ENST00000538862 NAPBQ9H115 298 aa16.74■□□□□ 0.27
CDCA3-207ENST00000538862 ECM29Q5VYK3 1845 aa16.74■□□□□ 0.27
CDCA3-207ENST00000538862 GNAT2P19087 354 aa16.74■□□□□ 0.27
CDCA3-207ENST00000538862 KCNJ6P48051 423 aa16.74■□□□□ 0.27
CDCA3-207ENST00000538862 SSRP1Q08945 709 aaKnown RBP16.74■□□□□ 0.27
CDCA3-207ENST00000538862 RESP18Q5W5W9 173 aa16.74■□□□□ 0.27
CDCA3-207ENST00000538862 SHC4Q6S5L8 630 aa16.74■□□□□ 0.27
CDCA3-207ENST00000538862 SMAP1Q8IYB5 467 aaPredicted RBP16.74■□□□□ 0.27
CDCA3-207ENST00000538862 ELOA2Q8IYF1 753 aaPredicted RBP16.74■□□□□ 0.27
CDCA3-207ENST00000538862 RBM17Q96I25 401 aaKnown RBP16.74■□□□□ 0.27
CDCA3-207ENST00000538862 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.74■□□□□ 0.27
CDCA3-207ENST00000538862 XPO4Q9C0E2 1151 aaKnown RBP16.74■□□□□ 0.27
CDCA3-207ENST00000538862 GPBP1L1Q9HC44 474 aaPredicted RBP16.74■□□□□ 0.27
CDCA3-207ENST00000538862 SENP2Q9HC62 589 aa16.74■□□□□ 0.27
CDCA3-207ENST00000538862 EPB41L4AQ9HCS5 686 aaPredicted RBP16.74■□□□□ 0.27
CDCA3-207ENST00000538862 SLC12A7Q9Y666 1083 aa16.74■□□□□ 0.27
CDCA3-207ENST00000538862 TIAM2Q8IVF5 1701 aa16.73■□□□□ 0.27
CDCA3-207ENST00000538862 IFIT3O14879 490 aaKnown RBP16.73■□□□□ 0.27
CDCA3-207ENST00000538862 CUTAO60888 179 aa16.73■□□□□ 0.27
CDCA3-207ENST00000538862 FMNL1O95466 1100 aaPredicted RBP16.73■□□□□ 0.27
CDCA3-207ENST00000538862 RXRAP19793 462 aa16.73■□□□□ 0.27
CDCA3-207ENST00000538862 LMNB1P20700 586 aa16.73■□□□□ 0.27
CDCA3-207ENST00000538862 PPP4R3BQ5MIZ7 849 aa16.73■□□□□ 0.27
CDCA3-207ENST00000538862 AKNAD1Q5T1N1 836 aa16.73■□□□□ 0.27
CDCA3-207ENST00000538862 MAGEB6Q8N7X4 407 aa16.73■□□□□ 0.27
CDCA3-207ENST00000538862 TAOK3Q9H2K8 898 aa16.73■□□□□ 0.27
CDCA3-207ENST00000538862 IFNKQ9P0W0 207 aa16.73■□□□□ 0.27
CDCA3-207ENST00000538862 ZSWIM5Q9P217 1185 aa16.73■□□□□ 0.27
CDCA3-207ENST00000538862 USP27XA6NNY8 438 aa16.72■□□□□ 0.27
CDCA3-207ENST00000538862 BIN1O00499 593 aa16.72■□□□□ 0.27
CDCA3-207ENST00000538862 MYO1BO43795 1136 aa16.72■□□□□ 0.27
CDCA3-207ENST00000538862 RANBP6O60518 1105 aaKnown RBP16.72■□□□□ 0.27
CDCA3-207ENST00000538862 MBD4O95243 580 aa16.72■□□□□ 0.27
CDCA3-207ENST00000538862 SMC2O95347 1197 aa16.72■□□□□ 0.27
CDCA3-207ENST00000538862 IFNAR1P17181 557 aa16.72■□□□□ 0.27
CDCA3-207ENST00000538862 NCBP1Q09161 790 aaKnown RBP16.72■□□□□ 0.27
CDCA3-207ENST00000538862 RASGRF1Q13972 1273 aa16.72■□□□□ 0.27
CDCA3-207ENST00000538862 CCDC93Q567U6 631 aa16.72■□□□□ 0.27
CDCA3-207ENST00000538862 GSG1L2A8MUP6 293 aa16.72■□□□□ 0.27
CDCA3-207ENST00000538862 HELBQ8NG08 1087 aaPredicted RBP16.72■□□□□ 0.27
CDCA3-207ENST00000538862 CRAMP1Q96RY5 1269 aa16.72■□□□□ 0.27
CDCA3-207ENST00000538862 NACAP1Q9BZK3 213 aa16.72■□□□□ 0.27
CDCA3-207ENST00000538862 DICER1Q9UPY3 1922 aaKnown RBP16.71■□□□□ 0.27
CDCA3-207ENST00000538862 PPEF1O14829 653 aaPredicted RBP16.71■□□□□ 0.27
CDCA3-207ENST00000538862 NRDCO43847 1150 aa16.71■□□□□ 0.27
CDCA3-207ENST00000538862 RCAN1P53805 252 aa16.71■□□□□ 0.27
CDCA3-207ENST00000538862 SOGA3Q5TF21 947 aa16.71■□□□□ 0.27
CDCA3-207ENST00000538862 MFSD6Q6ZSS7 791 aa16.71■□□□□ 0.27
CDCA3-207ENST00000538862 TMC6Q7Z403 805 aa16.71■□□□□ 0.27
CDCA3-207ENST00000538862 TMTC2Q8N394 836 aa16.71■□□□□ 0.27
CDCA3-207ENST00000538862 STAG1Q8WVM7 1258 aa16.71■□□□□ 0.27
CDCA3-207ENST00000538862 MPHOSPH8Q99549 860 aa16.71■□□□□ 0.27
CDCA3-207ENST00000538862 COL4A1P02462 1669 aa16.71■□□□□ 0.27
CDCA3-207ENST00000538862 TUBB4AP04350 444 aa16.7■□□□□ 0.26
CDCA3-207ENST00000538862 FANCCQ00597 558 aa16.7■□□□□ 0.26
CDCA3-207ENST00000538862 CTDSPL2Q05D32 466 aa16.7■□□□□ 0.26
CDCA3-207ENST00000538862 SART3Q15020 963 aaKnown RBP16.7■□□□□ 0.26
CDCA3-207ENST00000538862 SLC26A6Q9BXS9 759 aa16.7■□□□□ 0.26
CDCA3-207ENST00000538862 ARMT1Q9H993 441 aa16.7■□□□□ 0.26
CDCA3-207ENST00000538862 CBFA2T2O43439 604 aa16.7■□□□□ 0.26
CDCA3-207ENST00000538862 SFPQP23246 707 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDCA3-207ENST00000538862 SAFBQ15424 915 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDCA3-207ENST00000538862 NOSTRINQ8IVI9 506 aa16.7■□□□□ 0.26
CDCA3-207ENST00000538862 KIF18AQ8NI77 898 aa16.7■□□□□ 0.26
CDCA3-207ENST00000538862 ARID3AQ99856 593 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms