RNA–Protein interactions for RNA: ENST00000536586.5

CD9-206, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 739 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-206ENST00000536586 ANKRD23Q86SG2 305 aa16.51■□□□□ 0.23
CD9-206ENST00000536586 ZSWIM8A7E2V4 1837 aa16.51■□□□□ 0.23
CD9-206ENST00000536586 MYH4Q9Y623 1939 aa16.51■□□□□ 0.23
CD9-206ENST00000536586 SMIM22K7EJ46 135 aa16.5■□□□□ 0.23
CD9-206ENST00000536586 GPAA1O43292 621 aa16.5■□□□□ 0.23
CD9-206ENST00000536586 ASNSP08243 561 aa16.5■□□□□ 0.23
CD9-206ENST00000536586 GUCY1A2P33402 732 aa16.5■□□□□ 0.23
CD9-206ENST00000536586 OTUD7BQ6GQQ9 843 aa16.5■□□□□ 0.23
CD9-206ENST00000536586 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
CD9-206ENST00000536586 SEC62Q99442 399 aaKnown RBP16.5■□□□□ 0.23
CD9-206ENST00000536586 EPB41L4AQ9HCS5 686 aaPredicted RBP16.5■□□□□ 0.23
CD9-206ENST00000536586 PICK1Q9NRD5 415 aa16.5■□□□□ 0.23
CD9-206ENST00000536586 MCM9Q9NXL9 1143 aa16.5■□□□□ 0.23
CD9-206ENST00000536586 ZBTB47Q9UFB7 747 aaPredicted RBP16.5■□□□□ 0.23
CD9-206ENST00000536586 SLC45A1Q9Y2W3 748 aa16.5■□□□□ 0.23
CD9-206ENST00000536586 USP17L5A8MUK1 530 aa16.49■□□□□ 0.23
CD9-206ENST00000536586 CYP2D6P10635 497 aa16.49■□□□□ 0.23
CD9-206ENST00000536586 CRHR2Q13324 411 aa16.49■□□□□ 0.23
CD9-206ENST00000536586 LRRFIP1Q32MZ4 808 aaKnown RBP16.49■□□□□ 0.23
CD9-206ENST00000536586 CCDC84Q86UT8 332 aaPredicted RBP16.49■□□□□ 0.23
CD9-206ENST00000536586 ZNF296Q8WUU4 475 aaPredicted RBP16.49■□□□□ 0.23
CD9-206ENST00000536586 ZBTB21Q9ULJ3 1066 aa16.49■□□□□ 0.23
CD9-206ENST00000536586 SLC4A4Q9Y6R1 1079 aa16.49■□□□□ 0.23
CD9-206ENST00000536586 LAMA4Q16363 1823 aa16.49■□□□□ 0.23
CD9-206ENST00000536586 ROBO3Q96MS0 1386 aa16.49■□□□□ 0.23
CD9-206ENST00000536586 PATL2C9JE40 543 aaKnown RBP16.48■□□□□ 0.23
CD9-206ENST00000536586 USP17L12C9JPN9 530 aa16.48■□□□□ 0.23
CD9-206ENST00000536586 USP17L21D6R901 530 aa16.48■□□□□ 0.23
CD9-206ENST00000536586 GNAT2P19087 354 aa16.48■□□□□ 0.23
CD9-206ENST00000536586 CAP1Q01518 475 aa16.48■□□□□ 0.23
CD9-206ENST00000536586 CRACR2BQ8N4Y2 399 aaPredicted RBP16.48■□□□□ 0.23
CD9-206ENST00000536586 ZNF280CQ8ND82 737 aa16.48■□□□□ 0.23
CD9-206ENST00000536586 FSD1Q9BTV5 496 aa16.48■□□□□ 0.23
CD9-206ENST00000536586 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.48■□□□□ 0.23
CD9-206ENST00000536586 TLR2O60603 784 aa16.47■□□□□ 0.23
CD9-206ENST00000536586 POLR3DP05423 398 aaPredicted RBP16.47■□□□□ 0.23
CD9-206ENST00000536586 C16orf86Q6ZW13 317 aa16.47■□□□□ 0.23
CD9-206ENST00000536586 FASTKD5Q7L8L6 764 aaKnown RBP16.47■□□□□ 0.23
CD9-206ENST00000536586 PROCA1Q8NCQ7 364 aaPredicted RBP16.47■□□□□ 0.23
CD9-206ENST00000536586 HELLSQ9NRZ9 838 aa16.47■□□□□ 0.23
CD9-206ENST00000536586 SWAP70Q9UH65 585 aa16.47■□□□□ 0.23
CD9-206ENST00000536586 CYP2D7A0A087X1C5 515 aa16.46■□□□□ 0.23
CD9-206ENST00000536586 GDF11O95390 407 aa16.46■□□□□ 0.23
CD9-206ENST00000536586 SPP2Q13103 211 aa16.46■□□□□ 0.23
CD9-206ENST00000536586 SLC4A8Q2Y0W8 1093 aa16.46■□□□□ 0.23
CD9-206ENST00000536586 CERKLQ49MI3 558 aaPredicted RBP16.46■□□□□ 0.23
CD9-206ENST00000536586 C17orf99Q6UX52 265 aa16.46■□□□□ 0.23
CD9-206ENST00000536586 ARPP21Q9UBL0 812 aaPredicted RBP16.46■□□□□ 0.23
CD9-206ENST00000536586 PDHXO00330 501 aa16.45■□□□□ 0.22
CD9-206ENST00000536586 FKTNO75072 461 aa16.45■□□□□ 0.22
CD9-206ENST00000536586 GH2P01242 217 aa16.45■□□□□ 0.22
CD9-206ENST00000536586 BACE1P56817 501 aa16.45■□□□□ 0.22
CD9-206ENST00000536586 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
CD9-206ENST00000536586 ALX1Q15699 326 aa16.45■□□□□ 0.22
CD9-206ENST00000536586 SIAH1Q8IUQ4 282 aa16.45■□□□□ 0.22
CD9-206ENST00000536586 IFNL3Q8IZI9 196 aa16.45■□□□□ 0.22
CD9-206ENST00000536586 SLC44A5Q8NCS7 719 aa16.45■□□□□ 0.22
CD9-206ENST00000536586 DYNLL2Q96FJ2 89 aa16.45■□□□□ 0.22
CD9-206ENST00000536586 C12orf42Q96LP6 360 aa16.45■□□□□ 0.22
CD9-206ENST00000536586 AS3MTQ9HBK9 375 aa16.45■□□□□ 0.22
CD9-206ENST00000536586 ZFYVE28Q9HCC9 887 aa16.45■□□□□ 0.22
CD9-206ENST00000536586 AGTPBP1Q9UPW5 1226 aa16.45■□□□□ 0.22
CD9-206ENST00000536586 A0A0D9SFI3 127 aa16.44■□□□□ 0.22
CD9-206ENST00000536586 TRIM75PA6NK02 468 aa16.44■□□□□ 0.22
CD9-206ENST00000536586 C19orf81C9J6K1 198 aa16.44■□□□□ 0.22
CD9-206ENST00000536586 GSPT1P15170 499 aaKnown RBP16.44■□□□□ 0.22
CD9-206ENST00000536586 HOXA7P31268 230 aaPredicted RBP16.44■□□□□ 0.22
CD9-206ENST00000536586 CDK8P49336 464 aa16.44■□□□□ 0.22
CD9-206ENST00000536586 FAM227BQ96M60 508 aa16.44■□□□□ 0.22
CD9-206ENST00000536586 PLXNB2O15031 1838 aa16.44■□□□□ 0.22
CD9-206ENST00000536586 CENPFP49454 3210 aa16.44■□□□□ 0.22
CD9-206ENST00000536586 BCRP11274 1271 aa16.43■□□□□ 0.22
CD9-206ENST00000536586 SDSP20132 328 aa16.43■□□□□ 0.22
CD9-206ENST00000536586 ABCB5Q2M3G0 1257 aa16.43■□□□□ 0.22
CD9-206ENST00000536586 CCDC17Q96LX7 622 aa16.43■□□□□ 0.22
CD9-206ENST00000536586 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.43■□□□□ 0.22
CD9-206ENST00000536586 EMILIN3Q9NT22 766 aa16.43■□□□□ 0.22
CD9-206ENST00000536586 A0A0G2JMZ2 1700 aa16.42■□□□□ 0.22
CD9-206ENST00000536586 USP17L10C9JJH3 530 aa16.42■□□□□ 0.22
CD9-206ENST00000536586 FGRP09769 529 aa16.42■□□□□ 0.22
CD9-206ENST00000536586 SP3Q02447 781 aa16.42■□□□□ 0.22
CD9-206ENST00000536586 MCMDC2Q4G0Z9 681 aa16.42■□□□□ 0.22
CD9-206ENST00000536586 TREML2Q5T2D2 321 aa16.42■□□□□ 0.22
CD9-206ENST00000536586 TTC22Q5TAA0 569 aa16.42■□□□□ 0.22
CD9-206ENST00000536586 CTU1Q7Z7A3 348 aaKnown RBP16.42■□□□□ 0.22
CD9-206ENST00000536586 TNS4Q8IZW8 715 aa16.42■□□□□ 0.22
CD9-206ENST00000536586 TRIM34Q9BYJ4 488 aa16.42■□□□□ 0.22
CD9-206ENST00000536586 KIAA1683Q9H0B3 1180 aa16.42■□□□□ 0.22
CD9-206ENST00000536586 ZNFX1Q9P2E3 1918 aaKnown RBP16.42■□□□□ 0.22
CD9-206ENST00000536586 COL11A1P12107 1806 aaPredicted RBP16.42■□□□□ 0.22
CD9-206ENST00000536586 ZMYM6O95789 1325 aa16.42■□□□□ 0.22
CD9-206ENST00000536586 A0A1W2PRG0 241 aa16.41■□□□□ 0.22
CD9-206ENST00000536586 RASA1P20936 1047 aa16.41■□□□□ 0.22
CD9-206ENST00000536586 HMGCS2P54868 508 aa16.41■□□□□ 0.22
CD9-206ENST00000536586 NMIQ13287 307 aaPredicted RBP16.41■□□□□ 0.22
CD9-206ENST00000536586 DGKZQ13574 1117 aa16.41■□□□□ 0.22
CD9-206ENST00000536586 SEPT2Q15019 361 aa16.41■□□□□ 0.22
CD9-206ENST00000536586 VPS53Q5VIR6 699 aa16.41■□□□□ 0.22
CD9-206ENST00000536586 CCDC129Q6ZRS4 1044 aa16.41■□□□□ 0.22
CD9-206ENST00000536586 TMEM179Q6ZVK1 233 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms