RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 MRPL41Q8IXM3 137 aaKnown RBP10.25□□□□□ -0.77
CASP4-213ENST00000534356 SHISA5Q8N114 240 aa10.25□□□□□ -0.77
CASP4-213ENST00000534356 FERD3LQ96RJ6 166 aa10.25□□□□□ -0.77
CASP4-213ENST00000534356 DPH2Q9BQC3 489 aaPredicted RBP10.25□□□□□ -0.77
CASP4-213ENST00000534356 ABCC9O60706 1549 aa10.24□□□□□ -0.77
CASP4-213ENST00000534356 CHURC1-FNTBB4DL54 471 aa10.24□□□□□ -0.77
CASP4-213ENST00000534356 DYRK3O43781 588 aa10.24□□□□□ -0.77
CASP4-213ENST00000534356 LRIG2O94898 1065 aa10.24□□□□□ -0.77
CASP4-213ENST00000534356 DNAJA1P31689 397 aaKnown RBP10.24□□□□□ -0.77
CASP4-213ENST00000534356 PRAMEF13Q5VWM6 474 aa10.24□□□□□ -0.77
CASP4-213ENST00000534356 RNF43Q68DV7 783 aa10.24□□□□□ -0.77
CASP4-213ENST00000534356 SLC6A19Q695T7 634 aa10.24□□□□□ -0.77
CASP4-213ENST00000534356 GATA6Q92908 595 aa10.24□□□□□ -0.77
CASP4-213ENST00000534356 MFSD14AQ96MC6 490 aa10.24□□□□□ -0.77
CASP4-213ENST00000534356 FOXQ1Q9C009 403 aa10.24□□□□□ -0.77
CASP4-213ENST00000534356 ANTXR1Q9H6X2 564 aa10.24□□□□□ -0.77
CASP4-213ENST00000534356 KLHL3Q9UH77 587 aa10.24□□□□□ -0.77
CASP4-213ENST00000534356 ZNRF3Q9ULT6 936 aa10.24□□□□□ -0.77
CASP4-213ENST00000534356 SLC22A31A6NKX4 558 aa10.23□□□□□ -0.77
CASP4-213ENST00000534356 CST3P01034 146 aaPredicted RBP10.23□□□□□ -0.77
CASP4-213ENST00000534356 FSTP19883 344 aa10.23□□□□□ -0.77
CASP4-213ENST00000534356 RANGAP1P46060 587 aaPredicted RBP10.23□□□□□ -0.77
CASP4-213ENST00000534356 ARID5AQ03989 594 aa10.23□□□□□ -0.77
CASP4-213ENST00000534356 FAM13CQ8NE31 585 aa10.23□□□□□ -0.77
CASP4-213ENST00000534356 TBC1D32Q96NH3 1257 aa10.23□□□□□ -0.77
CASP4-213ENST00000534356 NFIAQ12857 509 aa10.22□□□□□ -0.77
CASP4-213ENST00000534356 FBXW10Q5XX13 1052 aa10.22□□□□□ -0.77
CASP4-213ENST00000534356 ZAR1Q86SH2 424 aa10.22□□□□□ -0.77
CASP4-213ENST00000534356 FBXL6Q8N531 539 aa10.22□□□□□ -0.77
CASP4-213ENST00000534356 XAGE3Q8WTP9 111 aa10.22□□□□□ -0.77
CASP4-213ENST00000534356 GMLQ99445 158 aa10.22□□□□□ -0.77
CASP4-213ENST00000534356 MLECQ14165 292 aa10.21□□□□□ -0.77
CASP4-213ENST00000534356 GMIPQ9P107 970 aa10.21□□□□□ -0.77
CASP4-213ENST00000534356 LEFTY1O75610 366 aa10.2□□□□□ -0.78
CASP4-213ENST00000534356 IGLV1-40P01703 118 aa10.2□□□□□ -0.78
CASP4-213ENST00000534356 FGRP09769 529 aa10.2□□□□□ -0.78
CASP4-213ENST00000534356 IMPDH2P12268 514 aa10.2□□□□□ -0.78
CASP4-213ENST00000534356 YARSP54577 528 aaKnown RBP10.2□□□□□ -0.78
CASP4-213ENST00000534356 OVOS1Q6IE37 1185 aa10.2□□□□□ -0.78
CASP4-213ENST00000534356 MCF2L2Q86YR7 1114 aa10.2□□□□□ -0.78
CASP4-213ENST00000534356 TOP6BLQ8N6T0 577 aa10.2□□□□□ -0.78
CASP4-213ENST00000534356 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.2□□□□□ -0.78
CASP4-213ENST00000534356 SRRTQ9BXP5 876 aaKnown RBP10.2□□□□□ -0.78
CASP4-213ENST00000534356 SEMA6BQ9H3T3 888 aa10.2□□□□□ -0.78
CASP4-213ENST00000534356 PRDM10Q9NQV6 1147 aa10.2□□□□□ -0.78
CASP4-213ENST00000534356 FAM170BA6NMN3 283 aa10.19□□□□□ -0.78
CASP4-213ENST00000534356 MEIS3P2A8K0S8 358 aa10.19□□□□□ -0.78
CASP4-213ENST00000534356 F13BP05160 661 aa10.19□□□□□ -0.78
CASP4-213ENST00000534356 FAM87AP0C7U9 286 aa10.19□□□□□ -0.78
CASP4-213ENST00000534356 ARSHQ5FYA8 562 aa10.19□□□□□ -0.78
CASP4-213ENST00000534356 SLFN12Q8IYM2 578 aa10.19□□□□□ -0.78
CASP4-213ENST00000534356 MFSD2AQ8NA29 543 aa10.19□□□□□ -0.78
CASP4-213ENST00000534356 CPLX3Q8WVH0 158 aa10.19□□□□□ -0.78
CASP4-213ENST00000534356 TMEM40Q8WWA1 233 aa10.19□□□□□ -0.78
CASP4-213ENST00000534356 ATG4CQ96DT6 458 aa10.19□□□□□ -0.78
CASP4-213ENST00000534356 DBNDD2Q9BQY9 259 aa10.19□□□□□ -0.78
CASP4-213ENST00000534356 DUSP23Q9BVJ7 150 aa10.19□□□□□ -0.78
CASP4-213ENST00000534356 SLITRK5O94991 958 aa10.18□□□□□ -0.78
CASP4-213ENST00000534356 LRRFIP1Q32MZ4 808 aaKnown RBP10.18□□□□□ -0.78
CASP4-213ENST00000534356 OGFOD3Q6PK18 319 aa10.18□□□□□ -0.78
CASP4-213ENST00000534356 RBBP8NLQ8NC74 664 aaPredicted RBP10.18□□□□□ -0.78
CASP4-213ENST00000534356 RIN3Q8TB24 985 aa10.18□□□□□ -0.78
CASP4-213ENST00000534356 SHDQ96IW2 340 aa10.18□□□□□ -0.78
CASP4-213ENST00000534356 MIPEPQ99797 713 aa10.18□□□□□ -0.78
CASP4-213ENST00000534356 GSC2O15499 205 aa10.17□□□□□ -0.78
CASP4-213ENST00000534356 EIF6P56537 245 aaKnown RBP10.17□□□□□ -0.78
CASP4-213ENST00000534356 CDCP2Q5VXM1 449 aa10.17□□□□□ -0.78
CASP4-213ENST00000534356 LSRQ86X29 649 aaPredicted RBP10.17□□□□□ -0.78
CASP4-213ENST00000534356 GIMAP7Q8NHV1 300 aa10.17□□□□□ -0.78
CASP4-213ENST00000534356 SHKBP1Q8TBC3 707 aa10.17□□□□□ -0.78
CASP4-213ENST00000534356 CRBNQ96SW2 442 aa10.17□□□□□ -0.78
CASP4-213ENST00000534356 CNNM2Q9H8M5 875 aa10.17□□□□□ -0.78
CASP4-213ENST00000534356 STRIP2Q9ULQ0 834 aa10.17□□□□□ -0.78
CASP4-213ENST00000534356 WDR64B1ANS9 1081 aa10.16□□□□□ -0.78
CASP4-213ENST00000534356 SSBP05455 408 aaKnown RBP eCLIP10.16□□□□□ -0.78
CASP4-213ENST00000534356 GIPRP48546 466 aa10.16□□□□□ -0.78
CASP4-213ENST00000534356 PRSS36Q5K4E3 855 aa10.16□□□□□ -0.78
CASP4-213ENST00000534356 LETMD1Q6P1Q0 360 aa10.16□□□□□ -0.78
CASP4-213ENST00000534356 RUFY4Q6ZNE9 571 aa10.16□□□□□ -0.78
CASP4-213ENST00000534356 ZNF765Q7L2R6 523 aa10.16□□□□□ -0.78
CASP4-213ENST00000534356 NLRC3Q7RTR2 1065 aa10.16□□□□□ -0.78
CASP4-213ENST00000534356 PHACTR4Q8IZ21 702 aa10.16□□□□□ -0.78
CASP4-213ENST00000534356 CYB5D2Q8WUJ1 264 aa10.16□□□□□ -0.78
CASP4-213ENST00000534356 KIF2CQ99661 725 aa10.16□□□□□ -0.78
CASP4-213ENST00000534356 MRVI1Q9Y6F6 885 aa10.16□□□□□ -0.78
CASP4-213ENST00000534356 EOMESO95936 686 aa10.15□□□□□ -0.78
CASP4-213ENST00000534356 NME1P15531 152 aaKnown RBP10.15□□□□□ -0.78
CASP4-213ENST00000534356 PPP1R13LQ8WUF5 828 aa10.15□□□□□ -0.78
CASP4-213ENST00000534356 TANGO6Q9C0B7 1094 aa10.15□□□□□ -0.78
CASP4-213ENST00000534356 RAG1P15918 1043 aa10.14□□□□□ -0.79
CASP4-213ENST00000534356 POLR2BP30876 1174 aaKnown RBP10.14□□□□□ -0.79
CASP4-213ENST00000534356 FAM214BQ7L5A3 538 aa10.14□□□□□ -0.79
CASP4-213ENST00000534356 CDH24Q86UP0 819 aa10.14□□□□□ -0.79
CASP4-213ENST00000534356 ZDHHC13Q8IUH4 622 aa10.14□□□□□ -0.79
CASP4-213ENST00000534356 BAHD1Q8TBE0 780 aaPredicted RBP10.14□□□□□ -0.79
CASP4-213ENST00000534356 ANAPC16Q96DE5 110 aa10.14□□□□□ -0.79
CASP4-213ENST00000534356 CCDC74BQ96LY2 380 aa10.14□□□□□ -0.79
CASP4-213ENST00000534356 RBAK-RBAKDNI3L0D1 243 aa10.13□□□□□ -0.79
CASP4-213ENST00000534356 ACRP10323 421 aa10.13□□□□□ -0.79
CASP4-213ENST00000534356 ITGB7P26010 798 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms