RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 TMEM39BQ9GZU3 492 aa11.89□□□□□ -0.51
LDLRAD3-206ENST00000534091 ATP8A2Q9NTI2 1148 aa11.89□□□□□ -0.51
LDLRAD3-206ENST00000534091 USP40Q9NVE5 1235 aa11.89□□□□□ -0.51
LDLRAD3-206ENST00000534091 ANAPC4Q9UJX5 808 aa11.89□□□□□ -0.51
LDLRAD3-206ENST00000534091 SCAF8Q9UPN6 1271 aaKnown RBP11.89□□□□□ -0.51
LDLRAD3-206ENST00000534091 PRKAB2O43741 272 aa11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 APPP05067 770 aa11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 PCP11498 1178 aaKnown RBP11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 TDO2P48775 406 aa11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 NT5C2P49902 561 aa11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 DYNLL1P63167 89 aaKnown RBP11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 MAP3K9P80192 1104 aa11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 EXOSC10Q01780 885 aaKnown RBP11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 MOB2Q70IA6 237 aa11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 MB21D2Q8IYB1 491 aaPredicted RBP11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 STAG1Q8WVM7 1258 aa11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 NOL10Q9BSC4 688 aaKnown RBP11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 MTA3Q9BTC8 594 aa11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 ZNF341Q9BYN7 854 aa11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 NBPF3Q9H094 633 aa11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 CWC22Q9HCG8 908 aaKnown RBP11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 AATFQ9NY61 560 aaKnown RBP eCLIP11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 CSADQ9Y600 493 aa11.88□□□□□ -0.51
LDLRAD3-206ENST00000534091 HSP90AA1P07900 732 aaKnown RBP11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 CPA1P15085 419 aa11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 LBX1P52954 281 aa11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 HAND2P61296 217 aa11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 MAP3K10Q02779 954 aa11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 TOB2Q14106 344 aaPredicted RBP11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 SBK1Q52WX2 424 aa11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 OTUD7BQ6GQQ9 843 aa11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 TBC1D10CQ8IV04 446 aa11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 SLKQ9H2G2 1235 aaPredicted RBP11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 RNF41Q9H4P4 317 aaPredicted RBP11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 CNNM2Q9H8M5 875 aa11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 CHMP5Q9NZZ3 219 aa11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 ARPP21Q9UBL0 812 aaPredicted RBP11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 OTOFQ9HC10 1997 aa11.87□□□□□ -0.51
LDLRAD3-206ENST00000534091 TESPA1A2RU30 521 aaPredicted RBP11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 FGRP09769 529 aa11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 MCM5P33992 734 aa11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 BTDP43251 543 aa11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 EVCP57679 992 aa11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 PPARAQ07869 468 aa11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 TRDNQ13061 729 aa11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 AKNAD1Q5T1N1 836 aa11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 COL13A1Q5TAT6 717 aaPredicted RBP11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 RALYLQ86SE5 291 aaKnown RBP11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 SDR42E1Q8WUS8 393 aa11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 WNK4Q96J92 1243 aa11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 KRT23Q9C075 422 aa11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 ZCCHC17Q9NP64 241 aaKnown RBP11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 DCP1AQ9NPI6 582 aaPredicted RBP11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 RNF186Q9NXI6 227 aa11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 FAM198AQ9UFP1 575 aa11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 ZNF112Q9UJU3 913 aa11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 ATRNL1Q5VV63 1379 aa11.86□□□□□ -0.51
LDLRAD3-206ENST00000534091 ROBO3Q96MS0 1386 aa11.85□□□□□ -0.51
LDLRAD3-206ENST00000534091 TBC1D12O60347 775 aa11.85□□□□□ -0.51
LDLRAD3-206ENST00000534091 WDHD1O75717 1129 aaPredicted RBP11.85□□□□□ -0.51
LDLRAD3-206ENST00000534091 RHBDL3P58872 404 aa11.85□□□□□ -0.51
LDLRAD3-206ENST00000534091 PRKG1Q13976 671 aa11.85□□□□□ -0.51
LDLRAD3-206ENST00000534091 COL9A3Q14050 684 aaPredicted RBP11.85□□□□□ -0.51
LDLRAD3-206ENST00000534091 NOL9Q5SY16 702 aaKnown RBP11.85□□□□□ -0.51
LDLRAD3-206ENST00000534091 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.85□□□□□ -0.51
LDLRAD3-206ENST00000534091 Q6ZUG5 572 aa11.85□□□□□ -0.51
LDLRAD3-206ENST00000534091 ERO1BQ86YB8 467 aa11.85□□□□□ -0.51
LDLRAD3-206ENST00000534091 ZIC5Q96T25 663 aa11.85□□□□□ -0.51
LDLRAD3-206ENST00000534091 DHX36Q9H2U1 1008 aaKnown RBP11.85□□□□□ -0.51
LDLRAD3-206ENST00000534091 PCNTO95613 3336 aa11.85□□□□□ -0.51
LDLRAD3-206ENST00000534091 SPDYE5A6NIY4 337 aa11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 GTF2A2P52657 109 aa11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 CACNB3P54284 484 aa11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 ANTXR2P58335 489 aa11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 NFIAQ12857 509 aa11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 VGLL4Q14135 290 aa11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 ME3Q16798 604 aa11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 MFSD6Q6ZSS7 791 aa11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 TNS4Q8IZW8 715 aa11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 TMEM87BQ96K49 555 aa11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 WRNIP1Q96S55 665 aa11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 TAOK2Q9UL54 1235 aa11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 TPCN1Q9ULQ1 816 aa11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 NEDD4P46934 1319 aa11.84□□□□□ -0.51
LDLRAD3-206ENST00000534091 ORC4O43929 436 aa11.83□□□□□ -0.52
LDLRAD3-206ENST00000534091 LARGE1O95461 756 aa11.83□□□□□ -0.52
LDLRAD3-206ENST00000534091 PPATQ06203 517 aa11.83□□□□□ -0.52
LDLRAD3-206ENST00000534091 ST3GAL1Q11201 340 aa11.83□□□□□ -0.52
LDLRAD3-206ENST00000534091 TCP10Q12799 353 aa11.83□□□□□ -0.52
LDLRAD3-206ENST00000534091 CTR9Q6PD62 1173 aa11.83□□□□□ -0.52
LDLRAD3-206ENST00000534091 NOL8Q76FK4 1167 aaKnown RBP11.83□□□□□ -0.52
LDLRAD3-206ENST00000534091 SH3RF3Q8TEJ3 882 aaPredicted RBP11.83□□□□□ -0.52
LDLRAD3-206ENST00000534091 CHMP4CQ96CF2 233 aa11.83□□□□□ -0.52
LDLRAD3-206ENST00000534091 OPTNQ96CV9 577 aa11.83□□□□□ -0.52
LDLRAD3-206ENST00000534091 CLMNQ96JQ2 1002 aa11.83□□□□□ -0.52
LDLRAD3-206ENST00000534091 TCEANC2Q96MN5 208 aa11.83□□□□□ -0.52
LDLRAD3-206ENST00000534091 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.83□□□□□ -0.52
LDLRAD3-206ENST00000534091 MYH6P13533 1939 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms