RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 IQCA1Q86XH1 822 aa22.23■■□□□ 1.15
UBXN1-215ENST00000533476 ATP8A2Q9NTI2 1148 aa22.23■■□□□ 1.15
UBXN1-215ENST00000533476 NRBP1Q9UHY1 535 aa22.23■■□□□ 1.15
UBXN1-215ENST00000533476 DNTTIP2Q5QJE6 756 aaKnown RBP22.22■■□□□ 1.15
UBXN1-215ENST00000533476 FAM182BQ5T319 152 aa22.22■■□□□ 1.15
UBXN1-215ENST00000533476 IFIT1BQ5T764 474 aaKnown RBP22.22■■□□□ 1.15
UBXN1-215ENST00000533476 CATIPQ7Z7H3 387 aa22.22■■□□□ 1.15
UBXN1-215ENST00000533476 CMTR1Q8N1G2 835 aaKnown RBP22.22■■□□□ 1.15
UBXN1-215ENST00000533476 KRI1Q8N9T8 703 aaKnown RBP22.22■■□□□ 1.15
UBXN1-215ENST00000533476 USP17L12C9JPN9 530 aa22.21■■□□□ 1.15
UBXN1-215ENST00000533476 USP17L21D6R901 530 aa22.21■■□□□ 1.15
UBXN1-215ENST00000533476 IGSF3O75054 1194 aa22.21■■□□□ 1.15
UBXN1-215ENST00000533476 CALM1P0DP23 149 aa22.21■■□□□ 1.15
UBXN1-215ENST00000533476 CALM2P0DP24 149 aa22.21■■□□□ 1.15
UBXN1-215ENST00000533476 CALM3P0DP25 149 aa22.21■■□□□ 1.15
UBXN1-215ENST00000533476 RFC4P35249 363 aa22.21■■□□□ 1.15
UBXN1-215ENST00000533476 GTF2F1P35269 517 aaKnown RBP eCLIP22.21■■□□□ 1.15
UBXN1-215ENST00000533476 TOB1P50616 345 aaPredicted RBP22.21■■□□□ 1.15
UBXN1-215ENST00000533476 CHAF1AQ13111 956 aaPredicted RBP22.21■■□□□ 1.15
UBXN1-215ENST00000533476 CCDC82Q8N4S0 544 aa22.21■■□□□ 1.15
UBXN1-215ENST00000533476 DCP1AQ9NPI6 582 aaPredicted RBP22.21■■□□□ 1.15
UBXN1-215ENST00000533476 RBM28Q9NW13 759 aaKnown RBP22.21■■□□□ 1.15
UBXN1-215ENST00000533476 TUBE1Q9UJT0 475 aa22.21■■□□□ 1.15
UBXN1-215ENST00000533476 PRDX5P30044 214 aa22.21■■□□□ 1.15
UBXN1-215ENST00000533476 FUT2Q10981 343 aa22.21■■□□□ 1.15
UBXN1-215ENST00000533476 TRAPPC3LQ5T215 181 aa22.21■■□□□ 1.15
UBXN1-215ENST00000533476 SPTY2D1Q68D10 685 aaPredicted RBP22.21■■□□□ 1.15
UBXN1-215ENST00000533476 CLIC6Q96NY7 704 aa22.21■■□□□ 1.15
UBXN1-215ENST00000533476 AATFQ9NY61 560 aaKnown RBP eCLIP22.21■■□□□ 1.15
UBXN1-215ENST00000533476 DDAH1O94760 285 aa22.2■■□□□ 1.14
UBXN1-215ENST00000533476 SBK1Q52WX2 424 aa22.2■■□□□ 1.14
UBXN1-215ENST00000533476 FBXW7Q969H0 707 aa22.2■■□□□ 1.14
UBXN1-215ENST00000533476 ARPP21Q9UBL0 812 aaPredicted RBP22.2■■□□□ 1.14
UBXN1-215ENST00000533476 PRDM1O75626 825 aa22.19■■□□□ 1.14
UBXN1-215ENST00000533476 AKAP17AQ02040 695 aaKnown RBP22.19■■□□□ 1.14
UBXN1-215ENST00000533476 GRAPQ13588 217 aa22.19■■□□□ 1.14
UBXN1-215ENST00000533476 TXNRD3Q86VQ6 643 aa22.19■■□□□ 1.14
UBXN1-215ENST00000533476 GRAPLQ8TC17 118 aaPredicted RBP22.19■■□□□ 1.14
UBXN1-215ENST00000533476 NPHP1O15259 732 aa22.19■■□□□ 1.14
UBXN1-215ENST00000533476 PRPF3O43395 683 aaKnown RBP22.19■■□□□ 1.14
UBXN1-215ENST00000533476 XBP1P17861 261 aa22.19■■□□□ 1.14
UBXN1-215ENST00000533476 RXRBP28702 533 aa22.19■■□□□ 1.14
UBXN1-215ENST00000533476 TROAPQ12815 778 aa22.19■■□□□ 1.14
UBXN1-215ENST00000533476 CCDC144BQ3MJ40 725 aa22.19■■□□□ 1.14
UBXN1-215ENST00000533476 KCNH3Q9ULD8 1083 aa22.19■■□□□ 1.14
UBXN1-215ENST00000533476 LEMD3Q9Y2U8 911 aa22.19■■□□□ 1.14
UBXN1-215ENST00000533476 LRMPQ12912 555 aa22.18■■□□□ 1.14
UBXN1-215ENST00000533476 NFIXQ14938 502 aa22.18■■□□□ 1.14
UBXN1-215ENST00000533476 PKN1Q16512 942 aa22.18■■□□□ 1.14
UBXN1-215ENST00000533476 ELOA2Q8IYF1 753 aaPredicted RBP22.18■■□□□ 1.14
UBXN1-215ENST00000533476 FBXO2Q9UK22 296 aaPredicted RBP22.18■■□□□ 1.14
UBXN1-215ENST00000533476 MORC2Q9Y6X9 1032 aaPredicted RBP22.18■■□□□ 1.14
UBXN1-215ENST00000533476 BIN1O00499 593 aa22.18■■□□□ 1.14
UBXN1-215ENST00000533476 PTPREP23469 700 aa22.18■■□□□ 1.14
UBXN1-215ENST00000533476 NR5A1Q13285 461 aa22.18■■□□□ 1.14
UBXN1-215ENST00000533476 CEP131Q9UPN4 1083 aa22.18■■□□□ 1.14
UBXN1-215ENST00000533476 NEMFO60524 1076 aa22.17■■□□□ 1.14
UBXN1-215ENST00000533476 KRBA2Q6ZNG9 492 aa22.17■■□□□ 1.14
UBXN1-215ENST00000533476 DZIP1Q86YF9 867 aaKnown RBP22.17■■□□□ 1.14
UBXN1-215ENST00000533476 CNBD1Q8NA66 436 aa22.17■■□□□ 1.14
UBXN1-215ENST00000533476 OXER1Q8TDS5 423 aa22.17■■□□□ 1.14
UBXN1-215ENST00000533476 CACTINQ8WUQ7 758 aaKnown RBP22.17■■□□□ 1.14
UBXN1-215ENST00000533476 SMTNL1A8MU46 457 aa22.16■■□□□ 1.14
UBXN1-215ENST00000533476 PRKCSHP14314 528 aaPredicted RBP22.16■■□□□ 1.14
UBXN1-215ENST00000533476 ADRA2BP18089 450 aa22.16■■□□□ 1.14
UBXN1-215ENST00000533476 FAM196AQ6ZSG2 479 aa22.16■■□□□ 1.14
UBXN1-215ENST00000533476 TMTC3Q6ZXV5 915 aa22.16■■□□□ 1.14
UBXN1-215ENST00000533476 ZNF579Q8NAF0 562 aaKnown RBP22.16■■□□□ 1.14
UBXN1-215ENST00000533476 WDR66Q8TBY9 1149 aa22.16■■□□□ 1.14
UBXN1-215ENST00000533476 SHISA4Q96DD7 197 aa22.16■■□□□ 1.14
UBXN1-215ENST00000533476 PHF20Q9BVI0 1012 aa22.16■■□□□ 1.14
UBXN1-215ENST00000533476 IKBKBO14920 756 aa22.16■■□□□ 1.14
UBXN1-215ENST00000533476 PLEKHA8P1O95397 391 aa22.16■■□□□ 1.14
UBXN1-215ENST00000533476 NT5C2P49902 561 aa22.16■■□□□ 1.14
UBXN1-215ENST00000533476 TPM4P67936 248 aa22.16■■□□□ 1.14
UBXN1-215ENST00000533476 ANKIB1Q9P2G1 1089 aa22.16■■□□□ 1.14
UBXN1-215ENST00000533476 PCDHB6Q9Y5E3 794 aa22.16■■□□□ 1.14
UBXN1-215ENST00000533476 XDHP47989 1333 aa22.15■■□□□ 1.14
UBXN1-215ENST00000533476 EVX2Q03828 476 aa22.15■■□□□ 1.14
UBXN1-215ENST00000533476 PDE4BQ07343 736 aa22.15■■□□□ 1.14
UBXN1-215ENST00000533476 NCAPHQ15003 741 aa22.15■■□□□ 1.14
UBXN1-215ENST00000533476 METTL16Q86W50 562 aaKnown RBP22.15■■□□□ 1.14
UBXN1-215ENST00000533476 FAM13BQ9NYF5 915 aa22.15■■□□□ 1.14
UBXN1-215ENST00000533476 CYP2D6P10635 497 aa22.14■■□□□ 1.14
UBXN1-215ENST00000533476 KRT2P35908 639 aa22.14■■□□□ 1.14
UBXN1-215ENST00000533476 RBM10P98175 930 aaKnown RBP22.14■■□□□ 1.14
UBXN1-215ENST00000533476 PNOCQ13519 176 aa22.14■■□□□ 1.14
UBXN1-215ENST00000533476 LONRF3Q496Y0 759 aa22.14■■□□□ 1.14
UBXN1-215ENST00000533476 C15orf52Q6ZUT6 534 aaKnown RBP22.14■■□□□ 1.14
UBXN1-215ENST00000533476 SEPT12Q8IYM1 358 aa22.14■■□□□ 1.14
UBXN1-215ENST00000533476 CNNM3Q8NE01 707 aa22.14■■□□□ 1.14
UBXN1-215ENST00000533476 VPS54Q9P1Q0 977 aa22.14■■□□□ 1.14
UBXN1-215ENST00000533476 SRPRBQ9Y5M8 271 aaKnown RBP22.14■■□□□ 1.14
UBXN1-215ENST00000533476 CNTNAP5Q8WYK1 1306 aa22.14■■□□□ 1.14
UBXN1-215ENST00000533476 ONECUT3O60422 494 aaPredicted RBP22.14■■□□□ 1.13
UBXN1-215ENST00000533476 LRRC8AQ8IWT6 810 aa22.14■■□□□ 1.13
UBXN1-215ENST00000533476 CABP5Q9NP86 173 aa22.14■■□□□ 1.13
UBXN1-215ENST00000533476 JAG2Q9Y219 1238 aa22.14■■□□□ 1.13
UBXN1-215ENST00000533476 V9GY48 417 aaPredicted RBP22.14■■□□□ 1.13
UBXN1-215ENST00000533476 UBR3Q6ZT12 1888 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms