RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 CAPN12Q6ZSI9 719 aa16.23■□□□□ 0.19
LRRK1-207ENST00000531270 LARGE2Q8N3Y3 721 aa16.23■□□□□ 0.19
LRRK1-207ENST00000531270 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
LRRK1-207ENST00000531270 CNGA1P29973 690 aa16.23■□□□□ 0.19
LRRK1-207ENST00000531270 SESTD1Q86VW0 696 aa16.23■□□□□ 0.19
LRRK1-207ENST00000531270 MRPL50Q8N5N7 158 aaKnown RBP16.23■□□□□ 0.19
LRRK1-207ENST00000531270 TROQ12816 1431 aaPredicted RBP16.22■□□□□ 0.19
LRRK1-207ENST00000531270 PAK1Q13153 545 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 SMCR8Q8TEV9 937 aaPredicted RBP16.22■□□□□ 0.19
LRRK1-207ENST00000531270 RSAD2Q8WXG1 361 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 DNM3Q9UQ16 869 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 CD2APQ9Y5K6 639 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 ARHGAP42A6NI28 874 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 DKC1O60832 514 aaKnown RBP eCLIP16.22■□□□□ 0.19
LRRK1-207ENST00000531270 INPP5BP32019 993 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 ADCY7P51828 1080 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 FAM89AQ96GI7 184 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 PAGR1Q9BTK6 254 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 STK32BQ9NY57 414 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 SLC1A4P43007 532 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 ARHGAP24Q8N264 748 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 GLG1Q92896 1179 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 MYL10Q9BUA6 226 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 GGA1Q9UJY5 639 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 GSTA1P08263 222 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 GSTA2P09210 222 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 CTDSPL2Q05D32 466 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 PALM2Q8IXS6 379 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.22■□□□□ 0.19
LRRK1-207ENST00000531270 RASSF4Q9H2L5 321 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 KCNH3Q9ULD8 1083 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 FAM135AQ9P2D6 1515 aa16.22■□□□□ 0.19
LRRK1-207ENST00000531270 DEXIO95424 95 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 IRX3P78415 501 aaPredicted RBP16.21■□□□□ 0.19
LRRK1-207ENST00000531270 ANKRD20A3Q5VUR7 823 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 SYNJ2BP-COX16A0A087WUM0 186 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 CASP2P42575 452 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 PTPROQ16827 1216 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 TACO1Q9BSH4 297 aaKnown RBP16.21■□□□□ 0.19
LRRK1-207ENST00000531270 NCOA5Q9HCD5 579 aaKnown RBP16.21■□□□□ 0.19
LRRK1-207ENST00000531270 COX16Q9P0S2 106 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 LRWD1Q9UFC0 647 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 TTC41PQ6P2S7 1318 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 WDR7Q9Y4E6 1490 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 WDR97A6NE52 1622 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 HDAC1Q13547 482 aaPredicted RBP16.21■□□□□ 0.19
LRRK1-207ENST00000531270 PHLDB2Q86SQ0 1253 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 A0A1B0GUA9 196 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 CAPN9O14815 690 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 KLHL30Q0D2K2 578 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 OTUD7BQ6GQQ9 843 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 JADE1Q6IE81 842 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 TRIM50Q86XT4 487 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 TPH2Q8IWU9 490 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 NOS1P29475 1434 aa16.21■□□□□ 0.19
LRRK1-207ENST00000531270 A0A1B0GUL7 405 aa16.21■□□□□ 0.18
LRRK1-207ENST00000531270 hCG_1642624A0A1W2PR95 340 aa16.21■□□□□ 0.18
LRRK1-207ENST00000531270 TCIRG1Q13488 830 aa16.21■□□□□ 0.18
LRRK1-207ENST00000531270 TRIM14Q14142 442 aa16.21■□□□□ 0.18
LRRK1-207ENST00000531270 TTC38Q5R3I4 469 aa16.21■□□□□ 0.18
LRRK1-207ENST00000531270 MMS19Q96T76 1030 aa16.21■□□□□ 0.18
LRRK1-207ENST00000531270 ABCC5O15440 1437 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 ITGA6P23229 1130 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.2■□□□□ 0.18
LRRK1-207ENST00000531270 ATP2A3Q93084 1043 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 KRT12Q99456 494 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 CARD6Q9BX69 1037 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 BLZF1Q9H2G9 400 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 BCRP11274 1271 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 PPP1R2P41236 205 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 INPP1P49441 399 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 FAM102BQ5T8I3 360 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 PCDHB15Q9Y5E8 787 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 IFNB1P01574 187 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 CALCRLQ16602 461 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 MTHFSDQ2M296 383 aaKnown RBP16.2■□□□□ 0.18
LRRK1-207ENST00000531270 MUM1L1Q5H9M0 696 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 PARD3BQ8TEW8 1205 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 TTF2Q9UNY4 1162 aaKnown RBP16.2■□□□□ 0.18
LRRK1-207ENST00000531270 TIMM10P62072 90 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 LONRF2Q1L5Z9 754 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 PEX26Q7Z412 305 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 CCDC94Q9BW85 323 aaPredicted RBP16.2■□□□□ 0.18
LRRK1-207ENST00000531270 TRIM56Q9BRZ2 755 aaKnown RBP16.2■□□□□ 0.18
LRRK1-207ENST00000531270 EFCC1Q9HA90 598 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 TRPC6Q9Y210 931 aa16.2■□□□□ 0.18
LRRK1-207ENST00000531270 SMARCA4P51532 1647 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 TAF5LO75529 589 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 KRT3P12035 628 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 STMN1P16949 149 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 DPP8Q6V1X1 898 aaPredicted RBP16.19■□□□□ 0.18
LRRK1-207ENST00000531270 STAMQ92783 540 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 GDAP1L1Q96MZ0 367 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 MAGEA1P43355 309 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 ANO1Q5XXA6 986 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 PPP4R4Q6NUP7 873 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 LINS1Q8NG48 757 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 RNF10Q8N5U6 811 aaKnown RBP16.19■□□□□ 0.18
LRRK1-207ENST00000531270 CCNL1Q9UK58 526 aaPredicted RBP16.19■□□□□ 0.18
LRRK1-207ENST00000531270 GOLGA6BA6NDN3 693 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 1096.4 ms