RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 FGD1P98174 961 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 GABPAQ06546 454 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 Q6ZUG5 572 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 KRT26Q7Z3Y9 468 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 USP48Q86UV5 1035 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 RAB11FIP4Q86YS3 637 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 GLIS2Q9BZE0 524 aaPredicted RBP12.58□□□□□ -0.4
SOX6-213ENST00000530378 KRT23Q9C075 422 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 PI4KBQ9UBF8 816 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 SSC5DA1L4H1 1573 aa12.57□□□□□ -0.4
SOX6-213ENST00000530378 TSPY2A6NKD2 308 aa12.57□□□□□ -0.4
SOX6-213ENST00000530378 AKR1B1P15121 316 aa12.57□□□□□ -0.4
SOX6-213ENST00000530378 MCM5P33992 734 aa12.57□□□□□ -0.4
SOX6-213ENST00000530378 AK2P54819 239 aa12.57□□□□□ -0.4
SOX6-213ENST00000530378 TFAP4Q01664 338 aa12.57□□□□□ -0.4
SOX6-213ENST00000530378 MAP1SQ66K74 1059 aaPredicted RBP12.57□□□□□ -0.4
SOX6-213ENST00000530378 SULF1Q8IWU6 871 aa12.57□□□□□ -0.4
SOX6-213ENST00000530378 CHMP4CQ96CF2 233 aa12.57□□□□□ -0.4
SOX6-213ENST00000530378 TM6SF1Q9BZW5 370 aa12.57□□□□□ -0.4
SOX6-213ENST00000530378 CNNM2Q9H8M5 875 aa12.57□□□□□ -0.4
SOX6-213ENST00000530378 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.57□□□□□ -0.4
SOX6-213ENST00000530378 SENP2Q9HC62 589 aa12.57□□□□□ -0.4
SOX6-213ENST00000530378 ZSWIM5Q9P217 1185 aa12.57□□□□□ -0.4
SOX6-213ENST00000530378 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.57□□□□□ -0.4
SOX6-213ENST00000530378 PGAP2Q9UHJ9 254 aa12.57□□□□□ -0.4
SOX6-213ENST00000530378 NAP1L2Q9ULW6 460 aaPredicted RBP12.57□□□□□ -0.4
SOX6-213ENST00000530378 ORC4O43929 436 aa12.56□□□□□ -0.4
SOX6-213ENST00000530378 TSPY3P0CV98 308 aa12.56□□□□□ -0.4
SOX6-213ENST00000530378 TSPY8P0CW00 308 aa12.56□□□□□ -0.4
SOX6-213ENST00000530378 VEGFAP15692 232 aaPredicted RBP12.56□□□□□ -0.4
SOX6-213ENST00000530378 SLC4A3P48751 1232 aa12.56□□□□□ -0.4
SOX6-213ENST00000530378 FMR1Q06787 632 aaKnown RBP eCLIP12.56□□□□□ -0.4
SOX6-213ENST00000530378 RRP1BQ14684 758 aaKnown RBP12.56□□□□□ -0.4
SOX6-213ENST00000530378 DHX32Q7L7V1 743 aaKnown RBP12.56□□□□□ -0.4
SOX6-213ENST00000530378 ESR2Q92731 530 aa12.56□□□□□ -0.4
SOX6-213ENST00000530378 IL17RAQ96F46 866 aa12.56□□□□□ -0.4
SOX6-213ENST00000530378 EHD4Q9H223 541 aa12.56□□□□□ -0.4
SOX6-213ENST00000530378 MYH4Q9Y623 1939 aa12.56□□□□□ -0.4
SOX6-213ENST00000530378 OTOFQ9HC10 1997 aa12.56□□□□□ -0.4
SOX6-213ENST00000530378 ST18O60284 1047 aa12.55□□□□□ -0.4
SOX6-213ENST00000530378 DTNBO60941 627 aa12.55□□□□□ -0.4
SOX6-213ENST00000530378 DSG3P32926 999 aa12.55□□□□□ -0.4
SOX6-213ENST00000530378 PNMA8AQ86V59 439 aaPredicted RBP12.55□□□□□ -0.4
SOX6-213ENST00000530378 ZNF444Q8N0Y2 327 aaPredicted RBP12.55□□□□□ -0.4
SOX6-213ENST00000530378 BRF1Q92994 677 aa12.55□□□□□ -0.4
SOX6-213ENST00000530378 TTC14Q96N46 770 aa12.55□□□□□ -0.4
SOX6-213ENST00000530378 PITPNM2Q9BZ72 1349 aa12.55□□□□□ -0.4
SOX6-213ENST00000530378 GREB1LQ9C091 1923 aaPredicted RBP12.55□□□□□ -0.4
SOX6-213ENST00000530378 TRAF5O00463 557 aa12.55□□□□□ -0.4
SOX6-213ENST00000530378 IFIT3O14879 490 aaKnown RBP12.55□□□□□ -0.4
SOX6-213ENST00000530378 HMGB1P09429 215 aaKnown RBP12.55□□□□□ -0.4
SOX6-213ENST00000530378 FGRP09769 529 aa12.55□□□□□ -0.4
SOX6-213ENST00000530378 EXOSC10Q01780 885 aaKnown RBP12.55□□□□□ -0.4
SOX6-213ENST00000530378 APOBRQ0VD83 1088 aa12.55□□□□□ -0.4
SOX6-213ENST00000530378 TOB2Q14106 344 aaPredicted RBP12.55□□□□□ -0.4
SOX6-213ENST00000530378 TMEM67Q5HYA8 995 aa12.55□□□□□ -0.4
SOX6-213ENST00000530378 UBAC1Q9BSL1 405 aa12.55□□□□□ -0.4
SOX6-213ENST00000530378 SWAP70Q9UH65 585 aa12.55□□□□□ -0.4
SOX6-213ENST00000530378 TNKSO95271 1327 aa12.54□□□□□ -0.4
SOX6-213ENST00000530378 LARGE1O95461 756 aa12.54□□□□□ -0.4
SOX6-213ENST00000530378 JAG1P78504 1218 aa12.54□□□□□ -0.4
SOX6-213ENST00000530378 STK3Q13188 491 aa12.54□□□□□ -0.4
SOX6-213ENST00000530378 CERKLQ49MI3 558 aaPredicted RBP12.54□□□□□ -0.4
SOX6-213ENST00000530378 CCDC84Q86UT8 332 aaPredicted RBP12.54□□□□□ -0.4
SOX6-213ENST00000530378 HSCBQ8IWL3 235 aa12.54□□□□□ -0.4
SOX6-213ENST00000530378 SPRYD3Q8NCJ5 442 aa12.54□□□□□ -0.4
SOX6-213ENST00000530378 TBC1D2Q9BYX2 928 aa12.54□□□□□ -0.4
SOX6-213ENST00000530378 ZNF408Q9H9D4 720 aa12.54□□□□□ -0.4
SOX6-213ENST00000530378 ZNF287Q9HBT7 754 aa12.54□□□□□ -0.4
SOX6-213ENST00000530378 MTMR7Q9Y216 660 aa12.54□□□□□ -0.4
SOX6-213ENST00000530378 DOCK1Q14185 1865 aa12.54□□□□□ -0.4
SOX6-213ENST00000530378 SH2B2O14492 632 aaPredicted RBP12.53□□□□□ -0.4
SOX6-213ENST00000530378 RXRAP19793 462 aa12.53□□□□□ -0.4
SOX6-213ENST00000530378 ATP2B2Q01814 1243 aa12.53□□□□□ -0.4
SOX6-213ENST00000530378 NFXL1Q6ZNB6 911 aa12.53□□□□□ -0.4
SOX6-213ENST00000530378 FOXP4Q8IVH2 680 aaPredicted RBP12.53□□□□□ -0.4
SOX6-213ENST00000530378 ENAHQ8N8S7 591 aaPredicted RBP12.53□□□□□ -0.4
SOX6-213ENST00000530378 CDCA5Q96FF9 252 aa12.53□□□□□ -0.4
SOX6-213ENST00000530378 ZSCAN10Q96SZ4 725 aaPredicted RBP12.53□□□□□ -0.4
SOX6-213ENST00000530378 MYL10Q9BUA6 226 aa12.53□□□□□ -0.4
SOX6-213ENST00000530378 GPBP1L1Q9HC44 474 aaPredicted RBP12.53□□□□□ -0.4
SOX6-213ENST00000530378 IL17RBQ9NRM6 502 aa12.53□□□□□ -0.4
SOX6-213ENST00000530378 GH2P01242 217 aa12.53□□□□□ -0.4
SOX6-213ENST00000530378 PCP11498 1178 aaKnown RBP12.53□□□□□ -0.4
SOX6-213ENST00000530378 RAB3GAP1Q15042 981 aa12.53□□□□□ -0.4
SOX6-213ENST00000530378 RASGRP2Q7LDG7 609 aa12.53□□□□□ -0.4
SOX6-213ENST00000530378 CCDC144CPQ8IYA2 1237 aa12.53□□□□□ -0.4
SOX6-213ENST00000530378 ZC3H15Q8WU90 426 aaKnown RBP12.53□□□□□ -0.4
SOX6-213ENST00000530378 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.53□□□□□ -0.4
SOX6-213ENST00000530378 LY9Q9HBG7 655 aa12.53□□□□□ -0.4
SOX6-213ENST00000530378 HERC5Q9UII4 1024 aaKnown RBP12.53□□□□□ -0.4
SOX6-213ENST00000530378 TPCN1Q9ULQ1 816 aa12.53□□□□□ -0.4
SOX6-213ENST00000530378 STX8Q9UNK0 236 aa12.53□□□□□ -0.4
SOX6-213ENST00000530378 ERICH2A1L162 156 aa12.52□□□□□ -0.41
SOX6-213ENST00000530378 WTAPQ15007 396 aa12.52□□□□□ -0.41
SOX6-213ENST00000530378 SEPT2Q15019 361 aa12.52□□□□□ -0.41
SOX6-213ENST00000530378 ABCB5Q2M3G0 1257 aa12.52□□□□□ -0.41
SOX6-213ENST00000530378 MOB2Q70IA6 237 aa12.52□□□□□ -0.41
SOX6-213ENST00000530378 IQCA1Q86XH1 822 aa12.52□□□□□ -0.41
SOX6-213ENST00000530378 CEP95Q96GE4 821 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms