RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 KNSTRNQ9Y448 316 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 PCDHGA11Q9Y5H2 935 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 DDX49Q9Y6V7 483 aaKnown RBP3.3□□□□□ -1.88
FDFT1-216ENST00000529521 BICRAQ9NZM4 1560 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 SFI1A8K8P3 1242 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 BOLA2-SMG1P6H3BVE0 249 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 DLL1O00548 723 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 BACH1O14867 736 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 NPHP1O15259 732 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 PTCD1O75127 700 aaKnown RBP3.29□□□□□ -1.88
FDFT1-216ENST00000529521 BPNT1O95861 308 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 ZSCAN20P17040 1043 aaPredicted RBP3.29□□□□□ -1.88
FDFT1-216ENST00000529521 STIP1P31948 543 aaKnown RBP3.29□□□□□ -1.88
FDFT1-216ENST00000529521 TSPAN7P41732 249 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 PIK3CAP42336 1068 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 PLAURQ03405 335 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 TMED1Q13445 227 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 RAPGEF1Q13905 1077 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 TMEM95Q3KNT9 176 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 ANKRD45Q5TZF3 282 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 LRCH2Q5VUJ6 765 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 CTR9Q6PD62 1173 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 FBXO33Q7Z6M2 555 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 DTX1Q86Y01 620 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 ZDHHC13Q8IUH4 622 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 RAVER1Q8IY67 606 aaKnown RBP3.29□□□□□ -1.88
FDFT1-216ENST00000529521 ELOA2Q8IYF1 753 aaPredicted RBP3.29□□□□□ -1.88
FDFT1-216ENST00000529521 SAMD14Q8IZD0 417 aaPredicted RBP3.29□□□□□ -1.88
FDFT1-216ENST00000529521 STAG2Q8N3U4 1231 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.29□□□□□ -1.88
FDFT1-216ENST00000529521 ZNF280CQ8ND82 737 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 TPCN2Q8NHX9 752 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 RHPN1Q8TCX5 695 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 FBXO41Q8TF61 875 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 TBC1D20Q96BZ9 403 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 ARMC5Q96C12 935 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 VMP1Q96GC9 406 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 CCDC34Q96HJ3 373 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 DUSP9Q99956 384 aaKnown RBP3.29□□□□□ -1.88
FDFT1-216ENST00000529521 TEX13AQ9BXU3 409 aaPredicted RBP3.29□□□□□ -1.88
FDFT1-216ENST00000529521 PDGFDQ9GZP0 370 aaPredicted RBP3.29□□□□□ -1.88
FDFT1-216ENST00000529521 MED4Q9NPJ6 270 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 KMT5AQ9NQR1 393 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 GINM1Q9NU53 330 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 TRMT1Q9NXH9 659 aaKnown RBP3.29□□□□□ -1.88
FDFT1-216ENST00000529521 MRPL42Q9Y6G3 142 aaKnown RBP3.29□□□□□ -1.88
FDFT1-216ENST00000529521 IKBKGQ9Y6K9 419 aa3.29□□□□□ -1.88
FDFT1-216ENST00000529521 PRSS47A8MTI9 375 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 F8W735 103 aaPredicted RBP3.28□□□□□ -1.88
FDFT1-216ENST00000529521 GSC2O15499 205 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 PPFIA2O75334 1257 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 BBOX1O75936 387 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 RAPGEF3O95398 923 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 RPN1P04843 607 aaKnown RBP3.28□□□□□ -1.88
FDFT1-216ENST00000529521 PSMA3P25788 255 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 HOXD10P28358 340 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 HOXC13P31276 330 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 EPHA4P54764 986 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 ZBED6P86452 979 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 DDB1Q16531 1140 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 FXNQ16595 210 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 COBLL1Q53SF7 1204 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 INO80DQ53TQ3 878 aaPredicted RBP3.28□□□□□ -1.88
FDFT1-216ENST00000529521 TBCELQ5QJ74 424 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 ODR4Q5SWX8 454 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 C10orf62Q5T681 223 aaPredicted RBP3.28□□□□□ -1.88
FDFT1-216ENST00000529521 TMEM164Q5U3C3 297 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 LMBRD2Q68DH5 695 aaPredicted RBP3.28□□□□□ -1.88
FDFT1-216ENST00000529521 CDC37L1Q7L3B6 337 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 TAX1BP1Q86VP1 789 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 SLC9A9Q8IVB4 645 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 BRSK2Q8IWQ3 736 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 SIX5Q8N196 739 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 TMEM130Q8N3G9 435 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 ARL6IP6Q8N6S5 226 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 POU5F2Q8N7G0 328 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 TEX19Q8NA77 164 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 APPL2Q8NEU8 664 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 STK32AQ8WU08 396 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 RELTQ969Z4 430 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 SYAP1Q96A49 352 aaPredicted RBP3.28□□□□□ -1.88
FDFT1-216ENST00000529521 ZNF496Q96IT1 587 aaPredicted RBP3.28□□□□□ -1.88
FDFT1-216ENST00000529521 TMEM87BQ96K49 555 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 RNPC3Q96LT9 517 aaKnown RBP3.28□□□□□ -1.88
FDFT1-216ENST00000529521 MAP3K14Q99558 947 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 KIF2CQ99661 725 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 LPIN3Q9BQK8 851 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 MMTAG2Q9BU76 263 aaKnown RBP3.28□□□□□ -1.88
FDFT1-216ENST00000529521 DHX36Q9H2U1 1008 aaKnown RBP3.28□□□□□ -1.88
FDFT1-216ENST00000529521 LGR6Q9HBX8 967 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 BRMS1Q9HCU9 246 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 COMMD8Q9NX08 183 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 ZNF69Q9UC07 566 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 USP25Q9UHP3 1055 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 HDAC9Q9UKV0 1011 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 ZMIZ1Q9ULJ6 1067 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 KIAA1024Q9UPX6 916 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 ITM2BQ9Y287 266 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 RAXQ9Y2V3 346 aa3.28□□□□□ -1.88
FDFT1-216ENST00000529521 EID1Q9Y6B2 187 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms