RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 USP40Q9NVE5 1235 aa27.05■■□□□ 1.92
LTBP3-212ENST00000529189 ORC3Q9UBD5 711 aaPredicted RBP27.05■■□□□ 1.92
LTBP3-212ENST00000529189 GJA3Q9Y6H8 435 aa27.05■■□□□ 1.92
LTBP3-212ENST00000529189 ELP1O95163 1332 aa27.05■■□□□ 1.92
LTBP3-212ENST00000529189 FOCADQ5VW36 1801 aa27.05■■□□□ 1.92
LTBP3-212ENST00000529189 ERICH2A1L162 156 aa27.04■■□□□ 1.92
LTBP3-212ENST00000529189 CDKL5O76039 1030 aa27.04■■□□□ 1.92
LTBP3-212ENST00000529189 USP17L8P0C7I0 530 aa27.04■■□□□ 1.92
LTBP3-212ENST00000529189 MKRN1Q9UHC7 482 aaKnown RBP27.04■■□□□ 1.92
LTBP3-212ENST00000529189 HDAC9Q9UKV0 1011 aa27.04■■□□□ 1.92
LTBP3-212ENST00000529189 ECM29Q5VYK3 1845 aa27.04■■□□□ 1.92
LTBP3-212ENST00000529189 CYP2D7A0A087X1C5 515 aa27.04■■□□□ 1.92
LTBP3-212ENST00000529189 WTAPQ15007 396 aa27.04■■□□□ 1.92
LTBP3-212ENST00000529189 CPLX2Q6PUV4 134 aaKnown RBP27.04■■□□□ 1.92
LTBP3-212ENST00000529189 MICU3Q86XE3 530 aa27.04■■□□□ 1.92
LTBP3-212ENST00000529189 OGFOD1Q8N543 542 aa27.04■■□□□ 1.92
LTBP3-212ENST00000529189 RNF181Q9P0P0 153 aa27.04■■□□□ 1.92
LTBP3-212ENST00000529189 SLC12A7Q9Y666 1083 aa27.04■■□□□ 1.92
LTBP3-212ENST00000529189 GOLGA8AA7E2F4 631 aa27.03■■□□□ 1.92
LTBP3-212ENST00000529189 USP17L12C9JPN9 530 aa27.03■■□□□ 1.92
LTBP3-212ENST00000529189 USP17L21D6R901 530 aa27.03■■□□□ 1.92
LTBP3-212ENST00000529189 SYNE3Q6ZMZ3 975 aa27.03■■□□□ 1.92
LTBP3-212ENST00000529189 MCM9Q9NXL9 1143 aa27.03■■□□□ 1.92
LTBP3-212ENST00000529189 FLT1P17948 1338 aa27.03■■□□□ 1.92
LTBP3-212ENST00000529189 DDX60LQ5H9U9 1706 aaKnown RBP27.03■■□□□ 1.92
LTBP3-212ENST00000529189 SMIM22K7EJ46 135 aa27.02■■□□□ 1.92
LTBP3-212ENST00000529189 TTC6Q86TZ1 520 aa27.02■■□□□ 1.92
LTBP3-212ENST00000529189 TMTC2Q8N394 836 aa27.02■■□□□ 1.92
LTBP3-212ENST00000529189 NID2Q14112 1375 aa27.02■■□□□ 1.92
LTBP3-212ENST00000529189 SLC4A8Q2Y0W8 1093 aa27.02■■□□□ 1.92
LTBP3-212ENST00000529189 ZKSCAN3Q9BRR0 538 aa27.02■■□□□ 1.92
LTBP3-212ENST00000529189 UBAC1Q9BSL1 405 aa27.02■■□□□ 1.92
LTBP3-212ENST00000529189 ARPP21Q9UBL0 812 aaPredicted RBP27.02■■□□□ 1.92
LTBP3-212ENST00000529189 SHTN1A0MZ66 631 aa27.01■■□□□ 1.91
LTBP3-212ENST00000529189 WDHD1O75717 1129 aaPredicted RBP27.01■■□□□ 1.91
LTBP3-212ENST00000529189 CYP2D6P10635 497 aa27.01■■□□□ 1.91
LTBP3-212ENST00000529189 RXRAP19793 462 aa27.01■■□□□ 1.91
LTBP3-212ENST00000529189 GMPSP49915 693 aaPredicted RBP27.01■■□□□ 1.91
LTBP3-212ENST00000529189 EVX2Q03828 476 aa27.01■■□□□ 1.91
LTBP3-212ENST00000529189 C8orf76Q96K31 380 aa27.01■■□□□ 1.91
LTBP3-212ENST00000529189 FGRP09769 529 aa27■■□□□ 1.91
LTBP3-212ENST00000529189 RPS12P25398 132 aaKnown RBP27■■□□□ 1.91
LTBP3-212ENST00000529189 ADD1P35611 737 aaKnown RBP27■■□□□ 1.91
LTBP3-212ENST00000529189 PICALMQ13492 652 aa27■■□□□ 1.91
LTBP3-212ENST00000529189 SBK1Q52WX2 424 aa27■■□□□ 1.91
LTBP3-212ENST00000529189 PRMT6Q96LA8 375 aaPredicted RBP27■■□□□ 1.91
LTBP3-212ENST00000529189 SPATA32Q96LK8 384 aa27■■□□□ 1.91
LTBP3-212ENST00000529189 SAP30BPQ9UHR5 308 aaKnown RBP27■■□□□ 1.91
LTBP3-212ENST00000529189 CDC27P30260 824 aa27■■□□□ 1.91
LTBP3-212ENST00000529189 GUCY1B3Q02153 619 aa27■■□□□ 1.91
LTBP3-212ENST00000529189 TFIP11Q9UBB9 837 aaKnown RBP27■■□□□ 1.91
LTBP3-212ENST00000529189 C9orf131Q5VYM1 1079 aa26.99■■□□□ 1.91
LTBP3-212ENST00000529189 RGS22Q8NE09 1264 aa26.99■■□□□ 1.91
LTBP3-212ENST00000529189 LEO1Q8WVC0 666 aaPredicted RBP26.99■■□□□ 1.91
LTBP3-212ENST00000529189 MYL10Q9BUA6 226 aa26.99■■□□□ 1.91
LTBP3-212ENST00000529189 DDX4Q9NQI0 724 aaKnown RBP26.99■■□□□ 1.91
LTBP3-212ENST00000529189 SYCE3A1L190 88 aa26.98■■□□□ 1.91
LTBP3-212ENST00000529189 SPDYE2BA6NHP3 402 aa26.98■■□□□ 1.91
LTBP3-212ENST00000529189 SLC3A2P08195 630 aaKnown RBP26.98■■□□□ 1.91
LTBP3-212ENST00000529189 SPDYE6P0CI01 402 aa26.98■■□□□ 1.91
LTBP3-212ENST00000529189 CACNB3P54284 484 aa26.98■■□□□ 1.91
LTBP3-212ENST00000529189 DLGAP5Q15398 846 aa26.98■■□□□ 1.91
LTBP3-212ENST00000529189 LRSAM1Q6UWE0 723 aa26.98■■□□□ 1.91
LTBP3-212ENST00000529189 CCDC144CPQ8IYA2 1237 aa26.98■■□□□ 1.91
LTBP3-212ENST00000529189 TDRD3Q9H7E2 651 aaKnown RBP26.98■■□□□ 1.91
LTBP3-212ENST00000529189 CFAP45Q9UL16 551 aa26.98■■□□□ 1.91
LTBP3-212ENST00000529189 RCAN1P53805 252 aa26.98■■□□□ 1.91
LTBP3-212ENST00000529189 NFIAQ12857 509 aa26.98■■□□□ 1.91
LTBP3-212ENST00000529189 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.98■■□□□ 1.91
LTBP3-212ENST00000529189 MYH1P12882 1939 aa26.98■■□□□ 1.91
LTBP3-212ENST00000529189 TPRNQ4KMQ1 711 aa26.97■■□□□ 1.91
LTBP3-212ENST00000529189 CCDC183Q5T5S1 534 aa26.97■■□□□ 1.91
LTBP3-212ENST00000529189 FAM217BQ9NTX9 383 aaPredicted RBP26.97■■□□□ 1.91
LTBP3-212ENST00000529189 TNKSO95271 1327 aa26.97■■□□□ 1.91
LTBP3-212ENST00000529189 ORC4O43929 436 aa26.97■■□□□ 1.91
LTBP3-212ENST00000529189 SEC23AQ15436 765 aa26.97■■□□□ 1.91
LTBP3-212ENST00000529189 ATL3Q6DD88 541 aa26.97■■□□□ 1.91
LTBP3-212ENST00000529189 FBXO18Q8NFZ0 1043 aa26.97■■□□□ 1.91
LTBP3-212ENST00000529189 RANBP6O60518 1105 aaKnown RBP26.96■■□□□ 1.91
LTBP3-212ENST00000529189 ZNF280AP59817 542 aaPredicted RBP26.96■■□□□ 1.91
LTBP3-212ENST00000529189 NTRK3Q16288 839 aa26.96■■□□□ 1.91
LTBP3-212ENST00000529189 C12orf60Q5U649 245 aa26.96■■□□□ 1.91
LTBP3-212ENST00000529189 MICALL2Q8IY33 904 aa26.96■■□□□ 1.91
LTBP3-212ENST00000529189 DPF2Q92785 391 aa26.96■■□□□ 1.91
LTBP3-212ENST00000529189 MYOZ2Q9NPC6 264 aa26.96■■□□□ 1.91
LTBP3-212ENST00000529189 GRIN3BO60391 1043 aa26.95■■□□□ 1.91
LTBP3-212ENST00000529189 POLR3DP05423 398 aaPredicted RBP26.95■■□□□ 1.91
LTBP3-212ENST00000529189 AMOTL1Q8IY63 956 aa26.95■■□□□ 1.91
LTBP3-212ENST00000529189 ZNF396Q96N95 335 aaPredicted RBP26.95■■□□□ 1.91
LTBP3-212ENST00000529189 ZSCAN10Q96SZ4 725 aaPredicted RBP26.95■■□□□ 1.91
LTBP3-212ENST00000529189 PANK2Q9BZ23 570 aa26.95■■□□□ 1.91
LTBP3-212ENST00000529189 STK36Q9NRP7 1315 aa26.95■■□□□ 1.9
LTBP3-212ENST00000529189 RTN1Q16799 776 aa26.95■■□□□ 1.9
LTBP3-212ENST00000529189 IQCA1Q86XH1 822 aa26.95■■□□□ 1.9
LTBP3-212ENST00000529189 ZNF654Q8IZM8 581 aa26.95■■□□□ 1.9
LTBP3-212ENST00000529189 GPC2Q8N158 579 aa26.95■■□□□ 1.9
LTBP3-212ENST00000529189 MTMR14Q8NCE2 650 aa26.95■■□□□ 1.9
LTBP3-212ENST00000529189 PRDM1O75626 825 aa26.94■■□□□ 1.9
LTBP3-212ENST00000529189 ALG1Q9BT22 464 aa26.94■■□□□ 1.9
LTBP3-212ENST00000529189 RTN4Q9NQC3 1192 aaKnown RBP26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms