RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 MED15Q96RN5 788 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 PRDM10Q9NQV6 1147 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 CCDC87Q9NVE4 849 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 KCNJ14Q9UNX9 436 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 PCDHB6Q9Y5E3 794 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 BCL9LQ86UU0 1499 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 ECM29Q5VYK3 1845 aa9.59□□□□□ -0.88
CSTF3-208ENST00000528865 SEMA3EO15041 775 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 RGL2O15211 777 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 POLR2DO15514 142 aaKnown RBP9.58□□□□□ -0.88
CSTF3-208ENST00000528865 PRR29P0C7W0 189 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 CYP7A1P22680 504 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 PLCD1P51178 756 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 FMR1Q06787 632 aaKnown RBP eCLIP9.58□□□□□ -0.88
CSTF3-208ENST00000528865 CHRNDQ07001 517 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 SF3B3Q15393 1217 aaKnown RBP9.58□□□□□ -0.88
CSTF3-208ENST00000528865 ELF2Q15723 593 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 FBXO38Q6PIJ6 1188 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 APTXQ7Z2E3 356 aaKnown RBP9.58□□□□□ -0.88
CSTF3-208ENST00000528865 NUTM2AQ8IVF1 878 aaPredicted RBP9.58□□□□□ -0.88
CSTF3-208ENST00000528865 TC2NQ8N9U0 490 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 ESR2Q92731 530 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 TNFRSF25Q93038 417 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 FERMT2Q96AC1 680 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 SHISA4Q96DD7 197 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 RIOK1Q9BRS2 568 aaKnown RBP9.58□□□□□ -0.88
CSTF3-208ENST00000528865 PHF20Q9BVI0 1012 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 BRIP1Q9BX63 1249 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 RBM28Q9NW13 759 aaKnown RBP9.58□□□□□ -0.88
CSTF3-208ENST00000528865 RREB1Q92766 1687 aa9.58□□□□□ -0.88
CSTF3-208ENST00000528865 COL14A1Q05707 1796 aaKnown RBP9.58□□□□□ -0.88
CSTF3-208ENST00000528865 MAGEB6P1A0A0J9YX57 407 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 A0A1B0GTH6 734 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 VWA3AA6NCI4 1184 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 TRIM75PA6NK02 468 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 SNAP23O00161 211 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 ATP8B1O43520 1251 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 TPM1P09493 284 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 SLFN14P0C7P3 912 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 CALM1P0DP23 149 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 CALM2P0DP24 149 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 CALM3P0DP25 149 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 XBP1P17861 261 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 NR5A1Q13285 461 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 UBE4AQ14139 1066 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 BMS1Q14692 1282 aaKnown RBP9.57□□□□□ -0.88
CSTF3-208ENST00000528865 SLC10A5Q5PT55 438 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 SPATA1Q5VX52 437 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 SPECC1LQ69YQ0 1117 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 KRT222Q8N1A0 295 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 OXER1Q8TDS5 423 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 CCDC34Q96HJ3 373 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 BAG1Q99933 345 aaPredicted RBP9.57□□□□□ -0.88
CSTF3-208ENST00000528865 ZKSCAN3Q9BRR0 538 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 CSRNP2Q9H175 543 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 CABP5Q9NP86 173 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 GNL3LQ9NVN8 582 aaKnown RBP9.57□□□□□ -0.88
CSTF3-208ENST00000528865 LRP2BPQ9P2M1 347 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 DNAI1Q9UI46 699 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 PPP2R2CQ9Y2T4 447 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 NFE2L3Q9Y4A8 694 aa9.57□□□□□ -0.88
CSTF3-208ENST00000528865 ZNF335Q9H4Z2 1342 aaPredicted RBP9.56□□□□□ -0.88
CSTF3-208ENST00000528865 PLCH1Q4KWH8 1693 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 FANCGO15287 622 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 ORC4O43929 436 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 IGSF3O75054 1194 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 TADA3O75528 432 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 DDAH1O94760 285 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 FECHP22830 423 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 KRT2P35908 639 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 PBX1P40424 430 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 NT5C2P49902 561 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 MAP3K9P80192 1104 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 TROAPQ12815 778 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 CUL4BQ13620 913 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 ERCC6LQ2NKX8 1250 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 RRP12Q5JTH9 1297 aaKnown RBP9.56□□□□□ -0.88
CSTF3-208ENST00000528865 SPECC1Q5M775 1068 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 CLEC4GQ6UXB4 293 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 USP49Q70CQ1 688 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 ADGRA1Q86SQ6 560 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 HOMER1Q86YM7 354 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 CREBRFQ8IUR6 639 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 PAGE5Q96GU1 130 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 PANX2Q96RD6 677 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 ZSCAN10Q96SZ4 725 aaPredicted RBP9.56□□□□□ -0.88
CSTF3-208ENST00000528865 UBAC1Q9BSL1 405 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 ZNF446Q9NWS9 450 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 RAI14Q9P0K7 980 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.56□□□□□ -0.88
CSTF3-208ENST00000528865 PARP3Q9Y6F1 533 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 CICQ96RK0 1608 aaPredicted RBP9.56□□□□□ -0.88
CSTF3-208ENST00000528865 TNKSO95271 1327 aa9.56□□□□□ -0.88
CSTF3-208ENST00000528865 PDS5AQ29RF7 1337 aaKnown RBP9.56□□□□□ -0.88
CSTF3-208ENST00000528865 STRCQ7RTU9 1775 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 CHD4Q14839 1912 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 LRRC10BA6NIK2 292 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 EFCAB8A8MWE9 144 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 PPP1R3GB7ZBB8 358 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 ZRANB2O95218 330 aaKnown RBP eCLIP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms