RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 RCSD1Q6JBY9 416 aa23.25■■□□□ 1.31
PPP1CA-204ENST00000526510 CCDC144CPQ8IYA2 1237 aa23.25■■□□□ 1.31
PPP1CA-204ENST00000526510 ZNF654Q8IZM8 581 aa23.25■■□□□ 1.31
PPP1CA-204ENST00000526510 SYT17Q9BSW7 474 aa23.25■■□□□ 1.31
PPP1CA-204ENST00000526510 GOLGA8AA7E2F4 631 aa23.25■■□□□ 1.31
PPP1CA-204ENST00000526510 FZD9O00144 591 aa23.25■■□□□ 1.31
PPP1CA-204ENST00000526510 MCM4P33991 863 aa23.25■■□□□ 1.31
PPP1CA-204ENST00000526510 TCP10Q12799 353 aa23.25■■□□□ 1.31
PPP1CA-204ENST00000526510 TNIP1Q15025 636 aa23.25■■□□□ 1.31
PPP1CA-204ENST00000526510 SH3BP5LQ7L8J4 393 aa23.25■■□□□ 1.31
PPP1CA-204ENST00000526510 SHTN1A0MZ66 631 aa23.24■■□□□ 1.31
PPP1CA-204ENST00000526510 BAG4O95429 457 aaKnown RBP23.24■■□□□ 1.31
PPP1CA-204ENST00000526510 ZSCAN22P10073 491 aaPredicted RBP23.24■■□□□ 1.31
PPP1CA-204ENST00000526510 IFIT1BQ5T764 474 aaKnown RBP23.24■■□□□ 1.31
PPP1CA-204ENST00000526510 ZNF444Q8N0Y2 327 aaPredicted RBP23.24■■□□□ 1.31
PPP1CA-204ENST00000526510 OGFOD1Q8N543 542 aa23.24■■□□□ 1.31
PPP1CA-204ENST00000526510 MTMR14Q8NCE2 650 aa23.24■■□□□ 1.31
PPP1CA-204ENST00000526510 CHMP4CQ96CF2 233 aa23.24■■□□□ 1.31
PPP1CA-204ENST00000526510 CHAMP1Q96JM3 812 aa23.24■■□□□ 1.31
PPP1CA-204ENST00000526510 MYH15Q9Y2K3 1946 aa23.24■■□□□ 1.31
PPP1CA-204ENST00000526510 DDTLA6NHG4 134 aaPredicted RBP23.23■■□□□ 1.31
PPP1CA-204ENST00000526510 DHX16O60231 1041 aaKnown RBP23.23■■□□□ 1.31
PPP1CA-204ENST00000526510 HMGN5P82970 282 aaKnown RBP23.23■■□□□ 1.31
PPP1CA-204ENST00000526510 DLGAP5Q15398 846 aa23.23■■□□□ 1.31
PPP1CA-204ENST00000526510 NTRK3Q16288 839 aa23.23■■□□□ 1.31
PPP1CA-204ENST00000526510 ZBED3Q96IU2 234 aaPredicted RBP23.23■■□□□ 1.31
PPP1CA-204ENST00000526510 ZNF287Q9HBT7 754 aa23.23■■□□□ 1.31
PPP1CA-204ENST00000526510 SLURP2P0DP57 97 aa23.22■■□□□ 1.31
PPP1CA-204ENST00000526510 SYNE3Q6ZMZ3 975 aa23.22■■□□□ 1.31
PPP1CA-204ENST00000526510 ARHGAP27Q6ZUM4 889 aa23.22■■□□□ 1.31
PPP1CA-204ENST00000526510 TCP11L1Q9NUJ3 509 aa23.22■■□□□ 1.31
PPP1CA-204ENST00000526510 SERPINB13Q9UIV8 391 aa23.22■■□□□ 1.31
PPP1CA-204ENST00000526510 TSPY3P0CV98 308 aa23.22■■□□□ 1.31
PPP1CA-204ENST00000526510 TSPY8P0CW00 308 aa23.22■■□□□ 1.31
PPP1CA-204ENST00000526510 PDCP20941 246 aa23.22■■□□□ 1.31
PPP1CA-204ENST00000526510 RCAN1P53805 252 aa23.22■■□□□ 1.31
PPP1CA-204ENST00000526510 GBP4Q96PP9 640 aa23.22■■□□□ 1.31
PPP1CA-204ENST00000526510 ANP32EQ9BTT0 268 aa23.22■■□□□ 1.31
PPP1CA-204ENST00000526510 ZNF70Q9UC06 446 aaPredicted RBP23.22■■□□□ 1.31
PPP1CA-204ENST00000526510 VPS37CA5D8V6 355 aaPredicted RBP23.21■■□□□ 1.31
PPP1CA-204ENST00000526510 CPLX1O14810 134 aa23.21■■□□□ 1.31
PPP1CA-204ENST00000526510 CDC37L1Q7L3B6 337 aa23.21■■□□□ 1.31
PPP1CA-204ENST00000526510 NEDD1Q8NHV4 660 aa23.21■■□□□ 1.31
PPP1CA-204ENST00000526510 ANKS1AQ92625 1134 aa23.21■■□□□ 1.31
PPP1CA-204ENST00000526510 EHD4Q9H223 541 aa23.21■■□□□ 1.31
PPP1CA-204ENST00000526510 UTRNP46939 3433 aa23.21■■□□□ 1.31
PPP1CA-204ENST00000526510 COL2A1P02458 1487 aaPredicted RBP23.21■■□□□ 1.31
PPP1CA-204ENST00000526510 ZNF541Q9H0D2 1346 aa23.2■■□□□ 1.31
PPP1CA-204ENST00000526510 MYH4Q9Y623 1939 aa23.2■■□□□ 1.3
PPP1CA-204ENST00000526510 CLRN2A0PK11 232 aa23.2■■□□□ 1.3
PPP1CA-204ENST00000526510 ENTPD3O75355 529 aa23.2■■□□□ 1.3
PPP1CA-204ENST00000526510 F13A1P00488 732 aa23.2■■□□□ 1.3
PPP1CA-204ENST00000526510 HLA-DOAP06340 250 aa23.2■■□□□ 1.3
PPP1CA-204ENST00000526510 SHMT1P34896 483 aa23.2■■□□□ 1.3
PPP1CA-204ENST00000526510 TROAPQ12815 778 aa23.2■■□□□ 1.3
PPP1CA-204ENST00000526510 SPDYE2Q495Y8 402 aa23.2■■□□□ 1.3
PPP1CA-204ENST00000526510 FAM184AQ8NB25 1140 aa23.2■■□□□ 1.3
PPP1CA-204ENST00000526510 FANCBQ8NB91 859 aa23.2■■□□□ 1.3
PPP1CA-204ENST00000526510 DHX36Q9H2U1 1008 aaKnown RBP23.2■■□□□ 1.3
PPP1CA-204ENST00000526510 DNAJC18Q9H819 358 aa23.2■■□□□ 1.3
PPP1CA-204ENST00000526510 ATRNL1Q5VV63 1379 aa23.2■■□□□ 1.3
PPP1CA-204ENST00000526510 EIF6P56537 245 aaKnown RBP23.19■■□□□ 1.3
PPP1CA-204ENST00000526510 ZNF280AP59817 542 aaPredicted RBP23.19■■□□□ 1.3
PPP1CA-204ENST00000526510 RTN1Q16799 776 aa23.19■■□□□ 1.3
PPP1CA-204ENST00000526510 DGKHQ86XP1 1220 aa23.19■■□□□ 1.3
PPP1CA-204ENST00000526510 NUP133Q8WUM0 1156 aa23.19■■□□□ 1.3
PPP1CA-204ENST00000526510 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.19■■□□□ 1.3
PPP1CA-204ENST00000526510 PLIN4Q96Q06 1357 aa23.19■■□□□ 1.3
PPP1CA-204ENST00000526510 RPS12P25398 132 aaKnown RBP23.19■■□□□ 1.3
PPP1CA-204ENST00000526510 GMPSP49915 693 aaPredicted RBP23.19■■□□□ 1.3
PPP1CA-204ENST00000526510 CATIPQ7Z7H3 387 aa23.19■■□□□ 1.3
PPP1CA-204ENST00000526510 MYOZ2Q9NPC6 264 aa23.19■■□□□ 1.3
PPP1CA-204ENST00000526510 ORC3Q9UBD5 711 aaPredicted RBP23.19■■□□□ 1.3
PPP1CA-204ENST00000526510 SWAP70Q9UH65 585 aa23.19■■□□□ 1.3
PPP1CA-204ENST00000526510 CNTNAP1P78357 1384 aa23.18■■□□□ 1.3
PPP1CA-204ENST00000526510 PHKBQ93100 1093 aa23.18■■□□□ 1.3
PPP1CA-204ENST00000526510 PI4KBQ9UBF8 816 aa23.18■■□□□ 1.3
PPP1CA-204ENST00000526510 TCP10L2B9ZVM9 353 aa23.17■■□□□ 1.3
PPP1CA-204ENST00000526510 DDAH1O94760 285 aa23.17■■□□□ 1.3
PPP1CA-204ENST00000526510 EGFRP00533 1210 aa23.17■■□□□ 1.3
PPP1CA-204ENST00000526510 PDIA4P13667 645 aaKnown RBP23.17■■□□□ 1.3
PPP1CA-204ENST00000526510 AKR1B1P15121 316 aa23.17■■□□□ 1.3
PPP1CA-204ENST00000526510 YBX3P16989 372 aaKnown RBP eCLIP23.17■■□□□ 1.37e-9■■■□□ 16.8
PPP1CA-204ENST00000526510 LMNB1P20700 586 aa23.17■■□□□ 1.3
PPP1CA-204ENST00000526510 NBPF9Q3BBW0 867 aa23.17■■□□□ 1.3
PPP1CA-204ENST00000526510 CCDC178Q5BJE1 867 aa23.17■■□□□ 1.3
PPP1CA-204ENST00000526510 GJA3Q9Y6H8 435 aa23.17■■□□□ 1.3
PPP1CA-204ENST00000526510 FAM196BA6NMK8 535 aa23.16■■□□□ 1.3
PPP1CA-204ENST00000526510 WNT10BO00744 389 aa23.16■■□□□ 1.3
PPP1CA-204ENST00000526510 IFNAR1P17181 557 aa23.16■■□□□ 1.3
PPP1CA-204ENST00000526510 NOVP48745 357 aa23.16■■□□□ 1.3
PPP1CA-204ENST00000526510 FOSBP53539 338 aa23.16■■□□□ 1.3
PPP1CA-204ENST00000526510 SRCAPQ6ZRS2 3230 aa23.16■■□□□ 1.3
PPP1CA-204ENST00000526510 NBPF11Q86T75 865 aa23.16■■□□□ 1.3
PPP1CA-204ENST00000526510 ZSCAN29Q8IWY8 852 aaPredicted RBP23.16■■□□□ 1.3
PPP1CA-204ENST00000526510 DPF2Q92785 391 aa23.16■■□□□ 1.3
PPP1CA-204ENST00000526510 TMOD2Q9NZR1 351 aa23.16■■□□□ 1.3
PPP1CA-204ENST00000526510 CDKL5O76039 1030 aa23.16■■□□□ 1.3
PPP1CA-204ENST00000526510 METTL16Q86W50 562 aaKnown RBP23.16■■□□□ 1.3
PPP1CA-204ENST00000526510 CMTR1Q8N1G2 835 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms