RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 ANTXR2P58335 489 aa18.67■□□□□ 0.58
TSPAN4-213ENST00000524895 TFAP4Q01664 338 aa18.67■□□□□ 0.58
TSPAN4-213ENST00000524895 SUPT20HL1Q3ZLR7 823 aa18.67■□□□□ 0.58
TSPAN4-213ENST00000524895 CDC37L1Q7L3B6 337 aa18.67■□□□□ 0.58
TSPAN4-213ENST00000524895 MIGA2Q7L4E1 593 aa18.67■□□□□ 0.58
TSPAN4-213ENST00000524895 USP48Q86UV5 1035 aa18.67■□□□□ 0.58
TSPAN4-213ENST00000524895 NKX2-3Q8TAU0 364 aa18.67■□□□□ 0.58
TSPAN4-213ENST00000524895 UBAC1Q9BSL1 405 aa18.67■□□□□ 0.58
TSPAN4-213ENST00000524895 GPBP1L1Q9HC44 474 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-213ENST00000524895 ZSWIM5Q9P217 1185 aa18.67■□□□□ 0.58
TSPAN4-213ENST00000524895 EXOSC10Q01780 885 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-213ENST00000524895 SART3Q15020 963 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-213ENST00000524895 CERKLQ49MI3 558 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-213ENST00000524895 TATDN1Q6P1N9 297 aa18.66■□□□□ 0.58
TSPAN4-213ENST00000524895 IQCA1Q86XH1 822 aa18.66■□□□□ 0.58
TSPAN4-213ENST00000524895 LRRC2Q9BYS8 371 aa18.66■□□□□ 0.58
TSPAN4-213ENST00000524895 GLIS2Q9BZE0 524 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-213ENST00000524895 SSC5DA1L4H1 1573 aa18.65■□□□□ 0.58
TSPAN4-213ENST00000524895 ERICH2A1L162 156 aa18.65■□□□□ 0.58
TSPAN4-213ENST00000524895 MPHOSPH10O00566 681 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-213ENST00000524895 MAP1SQ66K74 1059 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-213ENST00000524895 Q6ZUG5 572 aa18.65■□□□□ 0.58
TSPAN4-213ENST00000524895 CDCA5Q96FF9 252 aa18.65■□□□□ 0.58
TSPAN4-213ENST00000524895 CCDC17Q96LX7 622 aa18.65■□□□□ 0.58
TSPAN4-213ENST00000524895 TTC14Q96N46 770 aa18.65■□□□□ 0.58
TSPAN4-213ENST00000524895 ZKSCAN3Q9BRR0 538 aa18.65■□□□□ 0.58
TSPAN4-213ENST00000524895 POLR2AP24928 1970 aaKnown RBP18.64■□□□□ 0.58
TSPAN4-213ENST00000524895 IFIT3O14879 490 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-213ENST00000524895 AKR1B1P15121 316 aa18.64■□□□□ 0.57
TSPAN4-213ENST00000524895 NF2P35240 595 aa18.64■□□□□ 0.57
TSPAN4-213ENST00000524895 AK2P54819 239 aa18.64■□□□□ 0.57
TSPAN4-213ENST00000524895 MAP3K10Q02779 954 aa18.64■□□□□ 0.57
TSPAN4-213ENST00000524895 ANKRD1Q15327 319 aa18.64■□□□□ 0.57
TSPAN4-213ENST00000524895 TMEM67Q5HYA8 995 aa18.64■□□□□ 0.57
TSPAN4-213ENST00000524895 TMEM87BQ96K49 555 aa18.64■□□□□ 0.57
TSPAN4-213ENST00000524895 ZSCAN10Q96SZ4 725 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-213ENST00000524895 MTA3Q9BTC8 594 aa18.64■□□□□ 0.57
TSPAN4-213ENST00000524895 ZNF341Q9BYN7 854 aa18.64■□□□□ 0.57
TSPAN4-213ENST00000524895 TNKSO95271 1327 aa18.64■□□□□ 0.57
TSPAN4-213ENST00000524895 PLIN4Q96Q06 1357 aa18.64■□□□□ 0.57
TSPAN4-213ENST00000524895 SH2B2O14492 632 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-213ENST00000524895 GDF11O95390 407 aa18.63■□□□□ 0.57
TSPAN4-213ENST00000524895 ABCB5Q2M3G0 1257 aa18.63■□□□□ 0.57
TSPAN4-213ENST00000524895 CCDC178Q5BJE1 867 aa18.63■□□□□ 0.57
TSPAN4-213ENST00000524895 DLK2Q6UY11 383 aa18.63■□□□□ 0.57
TSPAN4-213ENST00000524895 NEDD1Q8NHV4 660 aa18.63■□□□□ 0.57
TSPAN4-213ENST00000524895 ALDH8A1Q9H2A2 487 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-213ENST00000524895 ANGEL1Q9UNK9 670 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-213ENST00000524895 MCM2P49736 904 aa18.62■□□□□ 0.57
TSPAN4-213ENST00000524895 WTAPQ15007 396 aa18.62■□□□□ 0.57
TSPAN4-213ENST00000524895 NOL8Q76FK4 1167 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-213ENST00000524895 HSCBQ8IWL3 235 aa18.62■□□□□ 0.57
TSPAN4-213ENST00000524895 BRF1Q92994 677 aa18.62■□□□□ 0.57
TSPAN4-213ENST00000524895 CABP5Q9NP86 173 aa18.62■□□□□ 0.57
TSPAN4-213ENST00000524895 NMT2O60551 498 aa18.61■□□□□ 0.57
TSPAN4-213ENST00000524895 CD2BP2O95400 341 aaKnown RBP18.61■□□□□ 0.57
TSPAN4-213ENST00000524895 TOB2Q14106 344 aaPredicted RBP18.61■□□□□ 0.57
TSPAN4-213ENST00000524895 CHADLQ6NUI6 762 aa18.61■□□□□ 0.57
TSPAN4-213ENST00000524895 TMEM179Q6ZVK1 233 aa18.61■□□□□ 0.57
TSPAN4-213ENST00000524895 FBXL16Q8N461 479 aa18.61■□□□□ 0.57
TSPAN4-213ENST00000524895 ENAHQ8N8S7 591 aaPredicted RBP18.61■□□□□ 0.57
TSPAN4-213ENST00000524895 SNX21Q969T3 373 aa18.61■□□□□ 0.57
TSPAN4-213ENST00000524895 GPHNQ9NQX3 736 aaPredicted RBP18.61■□□□□ 0.57
TSPAN4-213ENST00000524895 TCP11L1Q9NUJ3 509 aa18.61■□□□□ 0.57
TSPAN4-213ENST00000524895 GREB1LQ9C091 1923 aaPredicted RBP18.61■□□□□ 0.57
TSPAN4-213ENST00000524895 PHF20L1A8MW92 1017 aa18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 PPP1R12BO60237 982 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 GH2P01242 217 aa18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 PRKG1Q13976 671 aa18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 RRP1BQ14684 758 aaKnown RBP18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 PPP4R3BQ5MIZ7 849 aa18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 IFIT1BQ5T764 474 aaKnown RBP18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 NFXL1Q6ZNB6 911 aa18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 IGDCC4Q8TDY8 1250 aa18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 WRNIP1Q96S55 665 aa18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 AGXT2Q9BYV1 514 aa18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 LY9Q9HBG7 655 aa18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 IL17RBQ9NRM6 502 aa18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 ZBTB21Q9ULJ3 1066 aa18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 STX8Q9UNK0 236 aa18.6■□□□□ 0.57
TSPAN4-213ENST00000524895 CCDC69A6NI79 296 aa18.59■□□□□ 0.57
TSPAN4-213ENST00000524895 TRAF5O00463 557 aa18.59■□□□□ 0.57
TSPAN4-213ENST00000524895 YY1P25490 414 aa18.59■□□□□ 0.57
TSPAN4-213ENST00000524895 CAP2P40123 477 aa18.59■□□□□ 0.57
TSPAN4-213ENST00000524895 LIFRP42702 1097 aa18.59■□□□□ 0.57
TSPAN4-213ENST00000524895 BECN1Q14457 450 aa18.59■□□□□ 0.57
TSPAN4-213ENST00000524895 RAB3GAP1Q15042 981 aa18.59■□□□□ 0.57
TSPAN4-213ENST00000524895 SEC23AQ15436 765 aa18.59■□□□□ 0.57
TSPAN4-213ENST00000524895 SHROOM1Q2M3G4 852 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-213ENST00000524895 CEP95Q96GE4 821 aa18.59■□□□□ 0.57
TSPAN4-213ENST00000524895 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.59■□□□□ 0.57
TSPAN4-213ENST00000524895 FZD1Q9UP38 647 aa18.59■□□□□ 0.57
TSPAN4-213ENST00000524895 ATAD5Q96QE3 1844 aa18.58■□□□□ 0.57
TSPAN4-213ENST00000524895 IGKV6D-41A0A0C4DH26 115 aa18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 CTNND1O60716 968 aaKnown RBP18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 ASNSP08243 561 aa18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 IREB2P48200 963 aaKnown RBP18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 APOBRQ0VD83 1088 aa18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 TTLL12Q14166 644 aaPredicted RBP18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 SEPT2Q15019 361 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms