RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 GUCY1A2P33402 732 aa11.7□□□□□ -0.54
RNF4-221ENST00000513643 SBK1Q52WX2 424 aa11.7□□□□□ -0.54
RNF4-221ENST00000513643 CTR9Q6PD62 1173 aa11.7□□□□□ -0.54
RNF4-221ENST00000513643 CTU1Q7Z7A3 348 aaKnown RBP11.7□□□□□ -0.54
RNF4-221ENST00000513643 EVI5LQ96CN4 794 aa11.7□□□□□ -0.54
RNF4-221ENST00000513643 LNPKQ9C0E8 428 aa11.7□□□□□ -0.54
RNF4-221ENST00000513643 ZFYVE28Q9HCC9 887 aa11.7□□□□□ -0.54
RNF4-221ENST00000513643 MCM9Q9NXL9 1143 aa11.7□□□□□ -0.54
RNF4-221ENST00000513643 ZBTB21Q9ULJ3 1066 aa11.7□□□□□ -0.54
RNF4-221ENST00000513643 FOXP2O15409 715 aa11.69□□□□□ -0.54
RNF4-221ENST00000513643 CYP2D6P10635 497 aa11.69□□□□□ -0.54
RNF4-221ENST00000513643 BACE1P56817 501 aa11.69□□□□□ -0.54
RNF4-221ENST00000513643 SPP2Q13103 211 aa11.69□□□□□ -0.54
RNF4-221ENST00000513643 TAF1CQ15572 869 aaPredicted RBP11.69□□□□□ -0.54
RNF4-221ENST00000513643 CRACR2BQ8N4Y2 399 aaPredicted RBP11.69□□□□□ -0.54
RNF4-221ENST00000513643 PROCA1Q8NCQ7 364 aaPredicted RBP11.69□□□□□ -0.54
RNF4-221ENST00000513643 ABHD8Q96I13 439 aa11.69□□□□□ -0.54
RNF4-221ENST00000513643 SLC4A4Q9Y6R1 1079 aa11.69□□□□□ -0.54
RNF4-221ENST00000513643 DOCK1Q14185 1865 aa11.69□□□□□ -0.54
RNF4-221ENST00000513643 MYH1P12882 1939 aa11.68□□□□□ -0.54
RNF4-221ENST00000513643 TRIM75PA6NK02 468 aa11.68□□□□□ -0.54
RNF4-221ENST00000513643 USP17L12C9JPN9 530 aa11.68□□□□□ -0.54
RNF4-221ENST00000513643 USP17L21D6R901 530 aa11.68□□□□□ -0.54
RNF4-221ENST00000513643 M0R2C6 588 aa11.68□□□□□ -0.54
RNF4-221ENST00000513643 GPAA1O43292 621 aa11.68□□□□□ -0.54
RNF4-221ENST00000513643 GDF11O95390 407 aa11.68□□□□□ -0.54
RNF4-221ENST00000513643 POLR3DP05423 398 aaPredicted RBP11.68□□□□□ -0.54
RNF4-221ENST00000513643 BCRP11274 1271 aa11.68□□□□□ -0.54
RNF4-221ENST00000513643 SP3Q02447 781 aa11.68□□□□□ -0.54
RNF4-221ENST00000513643 DGKZQ13574 1117 aa11.68□□□□□ -0.54
RNF4-221ENST00000513643 PKN2Q16513 984 aaKnown RBP11.68□□□□□ -0.54
RNF4-221ENST00000513643 LRRFIP1Q32MZ4 808 aaKnown RBP11.68□□□□□ -0.54
RNF4-221ENST00000513643 CERKLQ49MI3 558 aaPredicted RBP11.68□□□□□ -0.54
RNF4-221ENST00000513643 C16orf86Q6ZW13 317 aa11.68□□□□□ -0.54
RNF4-221ENST00000513643 SIAH1Q8IUQ4 282 aa11.68□□□□□ -0.54
RNF4-221ENST00000513643 SEC62Q99442 399 aaKnown RBP11.68□□□□□ -0.54
RNF4-221ENST00000513643 EPB41L4AQ9HCS5 686 aaPredicted RBP11.68□□□□□ -0.54
RNF4-221ENST00000513643 AGTPBP1Q9UPW5 1226 aa11.68□□□□□ -0.54
RNF4-221ENST00000513643 PTPRFP10586 1907 aa11.68□□□□□ -0.54
RNF4-221ENST00000513643 BRCA2P51587 3418 aa11.67□□□□□ -0.54
RNF4-221ENST00000513643 MYH7P12883 1935 aa11.67□□□□□ -0.54
RNF4-221ENST00000513643 C19orf81C9J6K1 198 aa11.67□□□□□ -0.54
RNF4-221ENST00000513643 PATL2C9JE40 543 aaKnown RBP11.67□□□□□ -0.54
RNF4-221ENST00000513643 GH2P01242 217 aa11.67□□□□□ -0.54
RNF4-221ENST00000513643 GNAT2P19087 354 aa11.67□□□□□ -0.54
RNF4-221ENST00000513643 PDE4AP27815 886 aa11.67□□□□□ -0.54
RNF4-221ENST00000513643 HOXA7P31268 230 aaPredicted RBP11.67□□□□□ -0.54
RNF4-221ENST00000513643 IRX6P78412 446 aaPredicted RBP11.67□□□□□ -0.54
RNF4-221ENST00000513643 SLC4A8Q2Y0W8 1093 aa11.67□□□□□ -0.54
RNF4-221ENST00000513643 TREML2Q5T2D2 321 aa11.67□□□□□ -0.54
RNF4-221ENST00000513643 B4GALNT3Q6L9W6 998 aa11.67□□□□□ -0.54
RNF4-221ENST00000513643 DYNLL2Q96FJ2 89 aa11.67□□□□□ -0.54
RNF4-221ENST00000513643 C12orf42Q96LP6 360 aa11.67□□□□□ -0.54
RNF4-221ENST00000513643 AS3MTQ9HBK9 375 aa11.67□□□□□ -0.54
RNF4-221ENST00000513643 EMILIN3Q9NT22 766 aa11.67□□□□□ -0.54
RNF4-221ENST00000513643 SWAP70Q9UH65 585 aa11.67□□□□□ -0.54
RNF4-221ENST00000513643 CYP2D7A0A087X1C5 515 aa11.66□□□□□ -0.54
RNF4-221ENST00000513643 USP17L10C9JJH3 530 aa11.66□□□□□ -0.54
RNF4-221ENST00000513643 CYP2C8P10632 490 aa11.66□□□□□ -0.54
RNF4-221ENST00000513643 CTGFP29279 349 aa11.66□□□□□ -0.54
RNF4-221ENST00000513643 CDK8P49336 464 aa11.66□□□□□ -0.54
RNF4-221ENST00000513643 HMGCS2P54868 508 aa11.66□□□□□ -0.54
RNF4-221ENST00000513643 ABCB5Q2M3G0 1257 aa11.66□□□□□ -0.54
RNF4-221ENST00000513643 OTOP1Q7RTM1 612 aa11.66□□□□□ -0.54
RNF4-221ENST00000513643 SLC44A5Q8NCS7 719 aa11.66□□□□□ -0.54
RNF4-221ENST00000513643 ERO1AQ96HE7 468 aa11.66□□□□□ -0.54
RNF4-221ENST00000513643 PARK7Q99497 189 aaKnown RBP11.66□□□□□ -0.54
RNF4-221ENST00000513643 FSD1Q9BTV5 496 aa11.66□□□□□ -0.54
RNF4-221ENST00000513643 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.66□□□□□ -0.54
RNF4-221ENST00000513643 ZBTB47Q9UFB7 747 aaPredicted RBP11.66□□□□□ -0.54
RNF4-221ENST00000513643 ROBO3Q96MS0 1386 aa11.66□□□□□ -0.54
RNF4-221ENST00000513643 A0A1W2PRG0 241 aa11.65□□□□□ -0.54
RNF4-221ENST00000513643 LACTBP83111 547 aaPredicted RBP11.65□□□□□ -0.54
RNF4-221ENST00000513643 MTMR2Q13614 643 aa11.65□□□□□ -0.54
RNF4-221ENST00000513643 FBXO46Q6PJ61 603 aaPredicted RBP11.65□□□□□ -0.54
RNF4-221ENST00000513643 POTEEQ6S8J3 1075 aa11.65□□□□□ -0.54
RNF4-221ENST00000513643 IFNL3Q8IZI9 196 aa11.65□□□□□ -0.54
RNF4-221ENST00000513643 CD99L2Q8TCZ2 262 aa11.65□□□□□ -0.54
RNF4-221ENST00000513643 ACER1Q8TDN7 264 aa11.65□□□□□ -0.54
RNF4-221ENST00000513643 CCDC17Q96LX7 622 aa11.65□□□□□ -0.54
RNF4-221ENST00000513643 TRIM34Q9BYJ4 488 aa11.65□□□□□ -0.54
RNF4-221ENST00000513643 KIAA1683Q9H0B3 1180 aa11.65□□□□□ -0.54
RNF4-221ENST00000513643 HELLSQ9NRZ9 838 aa11.65□□□□□ -0.54
RNF4-221ENST00000513643 ARPP21Q9UBL0 812 aaPredicted RBP11.65□□□□□ -0.54
RNF4-221ENST00000513643 AKR1B1P15121 316 aa11.64□□□□□ -0.55
RNF4-221ENST00000513643 SEPT2Q15019 361 aa11.64□□□□□ -0.55
RNF4-221ENST00000513643 ALX1Q15699 326 aa11.64□□□□□ -0.55
RNF4-221ENST00000513643 GADL1Q6ZQY3 521 aa11.64□□□□□ -0.55
RNF4-221ENST00000513643 TMEM179Q6ZVK1 233 aa11.64□□□□□ -0.55
RNF4-221ENST00000513643 ARHGAP39Q9C0H5 1083 aa11.64□□□□□ -0.55
RNF4-221ENST00000513643 CPA4Q9UI42 421 aa11.64□□□□□ -0.55
RNF4-221ENST00000513643 PTPN22Q9Y2R2 807 aa11.64□□□□□ -0.55
RNF4-221ENST00000513643 LOC285556D6RIA3 1793 aa11.64□□□□□ -0.55
RNF4-221ENST00000513643 MKI67P46013 3256 aaKnown RBP11.64□□□□□ -0.55
RNF4-221ENST00000513643 NAV1Q8NEY1 1877 aa11.63□□□□□ -0.55
RNF4-221ENST00000513643 ATAD5Q96QE3 1844 aa11.63□□□□□ -0.55
RNF4-221ENST00000513643 GNRH1P01148 92 aa11.63□□□□□ -0.55
RNF4-221ENST00000513643 FGRP09769 529 aa11.63□□□□□ -0.55
RNF4-221ENST00000513643 SDSP20132 328 aa11.63□□□□□ -0.55
RNF4-221ENST00000513643 USP17L2Q6R6M4 530 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms