RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 SEMA3EO15041 775 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 MBD4O95243 580 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 CCDC175P0C221 793 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 IL2RBP14784 551 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 FECHP22830 423 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 OAS2P29728 719 aaKnown RBP13.19□□□□□ -0.3
SNX25-205ENST00000512853 CTDSPL2Q05D32 466 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 BRD3Q15059 726 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 TOM1L2Q6ZVM7 507 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 SH3RF1Q7Z6J0 888 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 CARD10Q9BWT7 1032 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 PARD6BQ9BYG5 372 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 ARFGAP3Q9NP61 516 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 SEC31BQ9NQW1 1179 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 SAMSN1Q9NSI8 373 aaKnown RBP13.19□□□□□ -0.3
SNX25-205ENST00000512853 AATFQ9NY61 560 aaKnown RBP eCLIP13.19□□□□□ -0.3
SNX25-205ENST00000512853 PCDHB6Q9Y5E3 794 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 MYH2Q9UKX2 1941 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 ITGB4P16144 1822 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 CCDC151A5D8V7 595 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 TXLNAP40222 546 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 CUL4BQ13620 913 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 TUBB2AQ13885 445 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 PUM3Q15397 648 aaKnown RBP13.19□□□□□ -0.3
SNX25-205ENST00000512853 HSP90AA4PQ58FG1 418 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 CDKAL1Q5VV42 579 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 SPATA1Q5VX52 437 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 DNAJC10Q8IXB1 793 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 GRAMD1CQ8IYS0 662 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 SYNE4Q8N205 404 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 TXLNBQ8N3L3 684 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 CRACR2BQ8N4Y2 399 aaPredicted RBP13.19□□□□□ -0.3
SNX25-205ENST00000512853 LPIN2Q92539 896 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 DESI2Q9BSY9 194 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 TUBB2BQ9BVA1 445 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 FUT8Q9BYC5 575 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 EPC1Q9H2F5 836 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 INCENPQ9NQS7 918 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 ADGRG1Q9Y653 693 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 PNPLA7Q6ZV29 1317 aa13.19□□□□□ -0.3
SNX25-205ENST00000512853 DLEC1Q9Y238 1755 aa13.18□□□□□ -0.3
SNX25-205ENST00000512853 CCDC196A0A1B0GTZ2 297 aa13.18□□□□□ -0.3
SNX25-205ENST00000512853 GSG1L2A8MUP6 293 aa13.18□□□□□ -0.3
SNX25-205ENST00000512853 TULP2O00295 520 aa13.18□□□□□ -0.3
SNX25-205ENST00000512853 SMC1AQ14683 1233 aaKnown RBP13.18□□□□□ -0.3
SNX25-205ENST00000512853 WTAPQ15007 396 aa13.18□□□□□ -0.3
SNX25-205ENST00000512853 KARSQ15046 597 aaKnown RBP13.18□□□□□ -0.3
SNX25-205ENST00000512853 MUM1L1Q5H9M0 696 aa13.18□□□□□ -0.3
SNX25-205ENST00000512853 SRGAP1Q7Z6B7 1085 aa13.18□□□□□ -0.3
SNX25-205ENST00000512853 CCDC12Q8WUD4 166 aaPredicted RBP13.18□□□□□ -0.3
SNX25-205ENST00000512853 CSRNP2Q9H175 543 aa13.18□□□□□ -0.3
SNX25-205ENST00000512853 SYNRGQ9UMZ2 1314 aa13.18□□□□□ -0.3
SNX25-205ENST00000512853 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 IRS4O14654 1257 aaPredicted RBP13.17□□□□□ -0.3
SNX25-205ENST00000512853 POLR3GO15318 223 aaPredicted RBP13.17□□□□□ -0.3
SNX25-205ENST00000512853 GNAT2P19087 354 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 MAP3K12Q12852 859 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 NR5A1Q13285 461 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 MTF1Q14872 753 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 SART3Q15020 963 aaKnown RBP13.17□□□□□ -0.3
SNX25-205ENST00000512853 HLFQ16534 295 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 ITIH6Q6UXX5 1313 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 RAD9BQ6WBX8 426 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 MFSD6Q6ZSS7 791 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 MROH5Q6ZUA9 1318 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 CADPS2Q86UW7 1296 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 TMTC2Q8N394 836 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 MSL3Q8N5Y2 521 aaKnown RBP13.17□□□□□ -0.3
SNX25-205ENST00000512853 SPATA5Q8NB90 893 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 CCDC51Q96ER9 411 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 CCDC34Q96HJ3 373 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 STRN4Q9NRL3 753 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 TMOD3Q9NYL9 352 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 ADD3Q9UEY8 706 aaKnown RBP13.17□□□□□ -0.3
SNX25-205ENST00000512853 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 ZNF330Q9Y3S2 320 aaPredicted RBP13.17□□□□□ -0.3
SNX25-205ENST00000512853 SOWAHDA6NJG2 315 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 MAP2K7O14733 419 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 PDE8AO60658 829 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 MFAP3LO75121 409 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 MAGEB6Q8N7X4 407 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 MSANTD4Q8NCY6 345 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 HNRNPLLQ8WVV9 542 aaKnown RBP13.17□□□□□ -0.3
SNX25-205ENST00000512853 ARMT1Q9H993 441 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 PRDM11Q9NQV5 511 aa13.17□□□□□ -0.3
SNX25-205ENST00000512853 RTL9Q8NET4 1388 aa13.16□□□□□ -0.3
SNX25-205ENST00000512853 MYH13Q9UKX3 1938 aa13.16□□□□□ -0.3
SNX25-205ENST00000512853 TEX33O43247 280 aa13.16□□□□□ -0.3
SNX25-205ENST00000512853 STARD3NLO95772 234 aa13.16□□□□□ -0.3
SNX25-205ENST00000512853 SLC5A1P13866 664 aa13.16□□□□□ -0.3
SNX25-205ENST00000512853 GPTP24298 496 aa13.16□□□□□ -0.3
SNX25-205ENST00000512853 USP5P45974 858 aa13.16□□□□□ -0.3
SNX25-205ENST00000512853 HNRNPH2P55795 449 aaKnown RBP13.16□□□□□ -0.3
SNX25-205ENST00000512853 CHMP4BP1P59074 171 aa13.16□□□□□ -0.3
SNX25-205ENST00000512853 TUBB4BP68371 445 aa13.16□□□□□ -0.3
SNX25-205ENST00000512853 LONRF2Q1L5Z9 754 aa13.16□□□□□ -0.3
SNX25-205ENST00000512853 USP49Q70CQ1 688 aa13.16□□□□□ -0.3
SNX25-205ENST00000512853 RASGRP2Q7LDG7 609 aa13.16□□□□□ -0.3
SNX25-205ENST00000512853 PPFIBP1Q86W92 1011 aa13.16□□□□□ -0.3
SNX25-205ENST00000512853 ZNF654Q8IZM8 581 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms