RNA–Protein interactions for RNA: ENST00000510281.1

TRIO-215, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-215ENST00000510281 TBC1D12O60347 775 aa24.41■■□□□ 1.5
TRIO-215ENST00000510281 NPM3O75607 178 aaKnown RBP24.41■■□□□ 1.5
TRIO-215ENST00000510281 BAG3O95817 575 aa24.41■■□□□ 1.5
TRIO-215ENST00000510281 ELNP15502 786 aa24.41■■□□□ 1.5
TRIO-215ENST00000510281 SMCR8Q8TEV9 937 aaPredicted RBP24.41■■□□□ 1.5
TRIO-215ENST00000510281 EDC3Q96F86 508 aaKnown RBP24.41■■□□□ 1.5
TRIO-215ENST00000510281 LRRCC1Q9C099 1032 aa24.41■■□□□ 1.5
TRIO-215ENST00000510281 CRISPLD2Q9H0B8 497 aa24.41■■□□□ 1.5
TRIO-215ENST00000510281 MAP4K4O95819 1239 aaPredicted RBP24.4■■□□□ 1.5
TRIO-215ENST00000510281 MIGA1Q8NAN2 632 aa24.4■■□□□ 1.5
TRIO-215ENST00000510281 COL2A1P02458 1487 aaPredicted RBP24.39■■□□□ 1.5
TRIO-215ENST00000510281 DOCK1Q14185 1865 aa24.39■■□□□ 1.5
TRIO-215ENST00000510281 TRIM75PA6NK02 468 aa24.39■■□□□ 1.49
TRIO-215ENST00000510281 PPP4CP60510 307 aa24.39■■□□□ 1.49
TRIO-215ENST00000510281 FAM110CQ1W6H9 321 aa24.39■■□□□ 1.49
TRIO-215ENST00000510281 MAPKAPK5Q8IW41 473 aa24.39■■□□□ 1.49
TRIO-215ENST00000510281 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.39■■□□□ 1.49
TRIO-215ENST00000510281 TGFBRAP1Q8WUH2 860 aa24.39■■□□□ 1.49
TRIO-215ENST00000510281 DEFB118Q96PH6 123 aa24.39■■□□□ 1.49
TRIO-215ENST00000510281 PTPRFP10586 1907 aa24.39■■□□□ 1.49
TRIO-215ENST00000510281 FLT1P17948 1338 aa24.38■■□□□ 1.49
TRIO-215ENST00000510281 PHIPQ8WWQ0 1821 aa24.38■■□□□ 1.49
TRIO-215ENST00000510281 GOLIM4O00461 696 aa24.38■■□□□ 1.49
TRIO-215ENST00000510281 MAP3K12Q12852 859 aa24.38■■□□□ 1.49
TRIO-215ENST00000510281 BOLA2Q9H3K6 86 aa24.38■■□□□ 1.49
TRIO-215ENST00000510281 DCTPP1Q9H773 170 aa24.38■■□□□ 1.49
TRIO-215ENST00000510281 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.38■■□□□ 1.49
TRIO-215ENST00000510281 IGSF3O75054 1194 aa24.37■■□□□ 1.49
TRIO-215ENST00000510281 TREML2Q5T2D2 321 aa24.37■■□□□ 1.49
TRIO-215ENST00000510281 ANKRD13CQ8N6S4 541 aa24.37■■□□□ 1.49
TRIO-215ENST00000510281 PROCA1Q8NCQ7 364 aaPredicted RBP24.37■■□□□ 1.49
TRIO-215ENST00000510281 COA7Q96BR5 231 aa24.37■■□□□ 1.49
TRIO-215ENST00000510281 PNMA3Q9UL41 463 aa24.37■■□□□ 1.49
TRIO-215ENST00000510281 EVI5O60447 810 aa24.36■■□□□ 1.49
TRIO-215ENST00000510281 TFRCP02786 760 aaKnown RBP24.36■■□□□ 1.49
TRIO-215ENST00000510281 PLCG2P16885 1265 aa24.36■■□□□ 1.49
TRIO-215ENST00000510281 CCDC84Q86UT8 332 aaPredicted RBP24.36■■□□□ 1.49
TRIO-215ENST00000510281 SIPA1L1O43166 1804 aa24.35■■□□□ 1.49
TRIO-215ENST00000510281 CDK5RAP2Q96SN8 1893 aa24.35■■□□□ 1.49
TRIO-215ENST00000510281 TTF1Q15361 905 aaPredicted RBP24.35■■□□□ 1.49
TRIO-215ENST00000510281 TBC1D2Q9BYX2 928 aa24.35■■□□□ 1.49
TRIO-215ENST00000510281 PDE6AP16499 860 aa24.34■■□□□ 1.49
TRIO-215ENST00000510281 ATP5JP18859 108 aa24.34■■□□□ 1.49
TRIO-215ENST00000510281 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.34■■□□□ 1.49
TRIO-215ENST00000510281 PAG1Q9NWQ8 432 aa24.34■■□□□ 1.49
TRIO-215ENST00000510281 SAP30BPQ9UHR5 308 aaKnown RBP24.34■■□□□ 1.49
TRIO-215ENST00000510281 FOCADQ5VW36 1801 aa24.33■■□□□ 1.49
TRIO-215ENST00000510281 GCLCP48506 637 aaPredicted RBP24.33■■□□□ 1.49
TRIO-215ENST00000510281 RRP1BQ14684 758 aaKnown RBP24.33■■□□□ 1.49
TRIO-215ENST00000510281 SLFNL1Q499Z3 407 aa24.33■■□□□ 1.49
TRIO-215ENST00000510281 TSHZ3Q63HK5 1081 aa24.33■■□□□ 1.49
TRIO-215ENST00000510281 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.33■■□□□ 1.49
TRIO-215ENST00000510281 COL6A3P12111 3177 aa24.32■■□□□ 1.48
TRIO-215ENST00000510281 SLC9C2Q5TAH2 1124 aa24.32■■□□□ 1.48
TRIO-215ENST00000510281 ANKLE1Q8NAG6 615 aa24.32■■□□□ 1.48
TRIO-215ENST00000510281 ZNF280CQ8ND82 737 aa24.32■■□□□ 1.48
TRIO-215ENST00000510281 PAWRQ96IZ0 340 aaKnown RBP24.32■■□□□ 1.48
TRIO-215ENST00000510281 HAUS7Q99871 368 aa24.32■■□□□ 1.48
TRIO-215ENST00000510281 RIOK1Q9BRS2 568 aaKnown RBP24.32■■□□□ 1.48
TRIO-215ENST00000510281 DNAJC18Q9H819 358 aa24.32■■□□□ 1.48
TRIO-215ENST00000510281 PALD1Q9ULE6 856 aa24.32■■□□□ 1.48
TRIO-215ENST00000510281 ZNF532Q9HCE3 1301 aa24.32■■□□□ 1.48
TRIO-215ENST00000510281 TCRBV5S4A2TA0A5A2 114 aa24.31■■□□□ 1.48
TRIO-215ENST00000510281 CHGBP05060 677 aa24.31■■□□□ 1.48
TRIO-215ENST00000510281 SPP2Q13103 211 aa24.31■■□□□ 1.48
TRIO-215ENST00000510281 PABPC4Q13310 644 aaKnown RBP eCLIP24.31■■□□□ 1.48
TRIO-215ENST00000510281 NECAB2Q7Z6G3 386 aa24.31■■□□□ 1.48
TRIO-215ENST00000510281 CCDC136Q96JN2 1154 aa24.31■■□□□ 1.48
TRIO-215ENST00000510281 TAOK2Q9UL54 1235 aa24.31■■□□□ 1.48
TRIO-215ENST00000510281 LOC285556D6RIA3 1793 aa24.31■■□□□ 1.48
TRIO-215ENST00000510281 SOX1O00570 391 aaPredicted RBP24.3■■□□□ 1.48
TRIO-215ENST00000510281 HMGCRP04035 888 aa24.3■■□□□ 1.48
TRIO-215ENST00000510281 USP5P45974 858 aa24.3■■□□□ 1.48
TRIO-215ENST00000510281 SH3D19Q5HYK7 790 aa24.3■■□□□ 1.48
TRIO-215ENST00000510281 DHX36Q9H2U1 1008 aaKnown RBP24.3■■□□□ 1.48
TRIO-215ENST00000510281 PI4KBQ9UBF8 816 aa24.3■■□□□ 1.48
TRIO-215ENST00000510281 GJD2Q9UKL4 321 aa24.3■■□□□ 1.48
TRIO-215ENST00000510281 CAP2P40123 477 aa24.29■■□□□ 1.48
TRIO-215ENST00000510281 DIS3LQ8TF46 1054 aaKnown RBP24.29■■□□□ 1.48
TRIO-215ENST00000510281 ECHDC1Q9NTX5 307 aa24.29■■□□□ 1.48
TRIO-215ENST00000510281 STAP2Q9UGK3 403 aa24.29■■□□□ 1.48
TRIO-215ENST00000510281 HERC5Q9UII4 1024 aaKnown RBP24.29■■□□□ 1.48
TRIO-215ENST00000510281 MAGEB6P1A0A0J9YX57 407 aa24.28■■□□□ 1.48
TRIO-215ENST00000510281 BMP8BP34820 402 aa24.28■■□□□ 1.48
TRIO-215ENST00000510281 HMGCS2P54868 508 aa24.28■■□□□ 1.48
TRIO-215ENST00000510281 TMED8Q6PL24 325 aaPredicted RBP24.28■■□□□ 1.48
TRIO-215ENST00000510281 EXOC6Q8TAG9 804 aa24.28■■□□□ 1.48
TRIO-215ENST00000510281 GDF15Q99988 308 aa24.28■■□□□ 1.48
TRIO-215ENST00000510281 ASCC2Q9H1I8 757 aaPredicted RBP24.28■■□□□ 1.48
TRIO-215ENST00000510281 MORF4L1Q9UBU8 362 aa24.28■■□□□ 1.48
TRIO-215ENST00000510281 DOCK3Q8IZD9 2030 aa24.27■■□□□ 1.48
TRIO-215ENST00000510281 USP17L5A8MUK1 530 aa24.27■■□□□ 1.48
TRIO-215ENST00000510281 SHROOM1Q2M3G4 852 aaPredicted RBP24.27■■□□□ 1.48
TRIO-215ENST00000510281 B4GALNT3Q6L9W6 998 aa24.27■■□□□ 1.48
TRIO-215ENST00000510281 CERS3Q8IU89 383 aa24.27■■□□□ 1.48
TRIO-215ENST00000510281 LCORLQ8N3X6 602 aa24.27■■□□□ 1.48
TRIO-215ENST00000510281 OTUD7AQ8TE49 926 aaPredicted RBP24.27■■□□□ 1.48
TRIO-215ENST00000510281 RPTORQ8N122 1335 aa24.27■■□□□ 1.48
TRIO-215ENST00000510281 DDX60LQ5H9U9 1706 aaKnown RBP24.27■■□□□ 1.48
TRIO-215ENST00000510281 ADD2P35612 726 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms