RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 DDIT3P35638 169 aa12.03□□□□□ -0.48
NEK1-205ENST00000510108 Q6ZUG5 572 aa12.03□□□□□ -0.48
NEK1-205ENST00000510108 MAPKAPK5Q8IW41 473 aa12.03□□□□□ -0.48
NEK1-205ENST00000510108 AMOTL1Q8IY63 956 aa12.03□□□□□ -0.48
NEK1-205ENST00000510108 INTS4Q96HW7 963 aaKnown RBP12.03□□□□□ -0.48
NEK1-205ENST00000510108 TMEM87BQ96K49 555 aa12.03□□□□□ -0.48
NEK1-205ENST00000510108 OSBPL5Q9H0X9 879 aaPredicted RBP12.03□□□□□ -0.48
NEK1-205ENST00000510108 DDX4Q9NQI0 724 aaKnown RBP12.03□□□□□ -0.48
NEK1-205ENST00000510108 MCM9Q9NXL9 1143 aa12.03□□□□□ -0.48
NEK1-205ENST00000510108 ATRNL1Q5VV63 1379 aa12.03□□□□□ -0.48
NEK1-205ENST00000510108 GREB1LQ9C091 1923 aaPredicted RBP12.02□□□□□ -0.49
NEK1-205ENST00000510108 NID2Q14112 1375 aa12.02□□□□□ -0.49
NEK1-205ENST00000510108 ZNF541Q9H0D2 1346 aa12.02□□□□□ -0.49
NEK1-205ENST00000510108 CYP2D7A0A087X1C5 515 aa12.02□□□□□ -0.49
NEK1-205ENST00000510108 MINDY4BA8MYZ0 360 aa12.02□□□□□ -0.49
NEK1-205ENST00000510108 B4E1Z4 1266 aa12.02□□□□□ -0.49
NEK1-205ENST00000510108 PRC1O43663 620 aa12.02□□□□□ -0.49
NEK1-205ENST00000510108 ENTPD3O75355 529 aa12.02□□□□□ -0.49
NEK1-205ENST00000510108 CYP2D6P10635 497 aa12.02□□□□□ -0.49
NEK1-205ENST00000510108 SLC4A3P48751 1232 aa12.02□□□□□ -0.49
NEK1-205ENST00000510108 OGFOD1Q8N543 542 aa12.02□□□□□ -0.49
NEK1-205ENST00000510108 NKX2-3Q8TAU0 364 aa12.02□□□□□ -0.49
NEK1-205ENST00000510108 TPCN1Q9ULQ1 816 aa12.02□□□□□ -0.49
NEK1-205ENST00000510108 PCDHAC2Q9Y5I4 1007 aa12.02□□□□□ -0.49
NEK1-205ENST00000510108 UTRNP46939 3433 aa12.01□□□□□ -0.49
NEK1-205ENST00000510108 PLIN4Q96Q06 1357 aa12.01□□□□□ -0.49
NEK1-205ENST00000510108 SMIM22K7EJ46 135 aa12.01□□□□□ -0.49
NEK1-205ENST00000510108 SH2B2O14492 632 aaPredicted RBP12.01□□□□□ -0.49
NEK1-205ENST00000510108 SNPHO15079 494 aa12.01□□□□□ -0.49
NEK1-205ENST00000510108 HOXB3P14651 431 aaPredicted RBP12.01□□□□□ -0.49
NEK1-205ENST00000510108 LMOD1P29536 600 aaPredicted RBP12.01□□□□□ -0.49
NEK1-205ENST00000510108 GABPAQ06546 454 aa12.01□□□□□ -0.49
NEK1-205ENST00000510108 PDE4BQ07343 736 aa12.01□□□□□ -0.49
NEK1-205ENST00000510108 FKBP1CQ5VVH2 108 aa12.01□□□□□ -0.49
NEK1-205ENST00000510108 C16orf86Q6ZW13 317 aa12.01□□□□□ -0.49
NEK1-205ENST00000510108 CYB5R4Q7L1T6 521 aa12.01□□□□□ -0.49
NEK1-205ENST00000510108 ESR2Q92731 530 aa12.01□□□□□ -0.49
NEK1-205ENST00000510108 PRMT6Q96LA8 375 aaPredicted RBP12.01□□□□□ -0.49
NEK1-205ENST00000510108 TCEANC2Q96MN5 208 aa12.01□□□□□ -0.49
NEK1-205ENST00000510108 EHD4Q9H223 541 aa12.01□□□□□ -0.49
NEK1-205ENST00000510108 FAM198AQ9UFP1 575 aa12.01□□□□□ -0.49
NEK1-205ENST00000510108 MYH8P13535 1937 aa12.01□□□□□ -0.49
NEK1-205ENST00000510108 KDM4AO75164 1064 aa12□□□□□ -0.49
NEK1-205ENST00000510108 LARGE1O95461 756 aa12□□□□□ -0.49
NEK1-205ENST00000510108 POLR3DP05423 398 aaPredicted RBP12□□□□□ -0.49
NEK1-205ENST00000510108 LIFRP42702 1097 aa12□□□□□ -0.49
NEK1-205ENST00000510108 PLCD1P51178 756 aa12□□□□□ -0.49
NEK1-205ENST00000510108 RBM5P52756 815 aaKnown RBP eCLIP12□□□□□ -0.49
NEK1-205ENST00000510108 ST3GAL1Q11201 340 aa12□□□□□ -0.49
NEK1-205ENST00000510108 NFIAQ12857 509 aa12□□□□□ -0.49
NEK1-205ENST00000510108 DLGAP5Q15398 846 aa12□□□□□ -0.49
NEK1-205ENST00000510108 ME3Q16798 604 aa12□□□□□ -0.49
NEK1-205ENST00000510108 TTC6Q86TZ1 520 aa12□□□□□ -0.49
NEK1-205ENST00000510108 SGMS1Q86VZ5 419 aa12□□□□□ -0.49
NEK1-205ENST00000510108 METTL16Q86W50 562 aaKnown RBP12□□□□□ -0.49
NEK1-205ENST00000510108 GPC2Q8N158 579 aa12□□□□□ -0.49
NEK1-205ENST00000510108 IGDCC4Q8TDY8 1250 aa12□□□□□ -0.49
NEK1-205ENST00000510108 BRF1Q92994 677 aa12□□□□□ -0.49
NEK1-205ENST00000510108 ZNF274Q96GC6 653 aaPredicted RBP12□□□□□ -0.49
NEK1-205ENST00000510108 DHX36Q9H2U1 1008 aaKnown RBP12□□□□□ -0.49
NEK1-205ENST00000510108 ZSWIM5Q9P217 1185 aa12□□□□□ -0.49
NEK1-205ENST00000510108 ANGEL1Q9UNK9 670 aaKnown RBP12□□□□□ -0.49
NEK1-205ENST00000510108 GJA3Q9Y6H8 435 aa12□□□□□ -0.49
NEK1-205ENST00000510108 GMPSP49915 693 aaPredicted RBP11.99□□□□□ -0.49
NEK1-205ENST00000510108 RCAN1P53805 252 aa11.99□□□□□ -0.49
NEK1-205ENST00000510108 LRRC2Q9BYS8 371 aa11.99□□□□□ -0.49
NEK1-205ENST00000510108 LY9Q9HBG7 655 aa11.99□□□□□ -0.49
NEK1-205ENST00000510108 ZNF287Q9HBT7 754 aa11.99□□□□□ -0.49
NEK1-205ENST00000510108 MYOZ2Q9NPC6 264 aa11.99□□□□□ -0.49
NEK1-205ENST00000510108 INCENPQ9NQS7 918 aa11.99□□□□□ -0.49
NEK1-205ENST00000510108 PFKFB2O60825 505 aa11.98□□□□□ -0.49
NEK1-205ENST00000510108 HLA-DOAP06340 250 aa11.98□□□□□ -0.49
NEK1-205ENST00000510108 YY1P25490 414 aa11.98□□□□□ -0.49
NEK1-205ENST00000510108 PICALMQ13492 652 aa11.98□□□□□ -0.49
NEK1-205ENST00000510108 CAMK2BQ13554 666 aa11.98□□□□□ -0.49
NEK1-205ENST00000510108 SEC23AQ15436 765 aa11.98□□□□□ -0.49
NEK1-205ENST00000510108 NOL8Q76FK4 1167 aaKnown RBP11.98□□□□□ -0.49
NEK1-205ENST00000510108 CHST3Q7LGC8 479 aa11.98□□□□□ -0.49
NEK1-205ENST00000510108 FAM83AQ86UY5 434 aa11.98□□□□□ -0.49
NEK1-205ENST00000510108 GTF3C6Q969F1 213 aa11.98□□□□□ -0.49
NEK1-205ENST00000510108 TDRD3Q9H7E2 651 aaKnown RBP11.98□□□□□ -0.49
NEK1-205ENST00000510108 CWC22Q9HCG8 908 aaKnown RBP11.98□□□□□ -0.49
NEK1-205ENST00000510108 TCP11L1Q9NUJ3 509 aa11.98□□□□□ -0.49
NEK1-205ENST00000510108 TMOD2Q9NZR1 351 aa11.98□□□□□ -0.49
NEK1-205ENST00000510108 ZNF70Q9UC06 446 aaPredicted RBP11.98□□□□□ -0.49
NEK1-205ENST00000510108 SWAP70Q9UH65 585 aa11.98□□□□□ -0.49
NEK1-205ENST00000510108 SAP30BPQ9UHR5 308 aaKnown RBP11.98□□□□□ -0.49
NEK1-205ENST00000510108 CNTNAP1P78357 1384 aa11.97□□□□□ -0.49
NEK1-205ENST00000510108 IQCA1LA6NCM1 817 aa11.97□□□□□ -0.49
NEK1-205ENST00000510108 WNT10BO00744 389 aa11.97□□□□□ -0.49
NEK1-205ENST00000510108 RASA1P20936 1047 aa11.97□□□□□ -0.49
NEK1-205ENST00000510108 NOVP48745 357 aa11.97□□□□□ -0.49
NEK1-205ENST00000510108 CDK8P49336 464 aa11.97□□□□□ -0.49
NEK1-205ENST00000510108 FGD1P98174 961 aa11.97□□□□□ -0.49
NEK1-205ENST00000510108 APOBRQ0VD83 1088 aa11.97□□□□□ -0.49
NEK1-205ENST00000510108 SART3Q15020 963 aaKnown RBP11.97□□□□□ -0.49
NEK1-205ENST00000510108 E2F4Q16254 413 aa11.97□□□□□ -0.49
NEK1-205ENST00000510108 RRP12Q5JTH9 1297 aaKnown RBP11.97□□□□□ -0.49
NEK1-205ENST00000510108 SH3BP5LQ7L8J4 393 aa11.97□□□□□ -0.49
NEK1-205ENST00000510108 IQCA1Q86XH1 822 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms