RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 SPON1Q9HCB6 807 aa6.62□□□□□ -1.35
NEK1-204ENST00000509912 TIMMDC1Q9NPL8 285 aa6.62□□□□□ -1.35
NEK1-204ENST00000509912 SNTG2Q9NY99 539 aa6.62□□□□□ -1.35
NEK1-204ENST00000509912 CHD4Q14839 1912 aa6.62□□□□□ -1.35
NEK1-204ENST00000509912 DUOX1Q9NRD9 1551 aa6.62□□□□□ -1.35
NEK1-204ENST00000509912 EP400Q96L91 3159 aa6.62□□□□□ -1.35
NEK1-204ENST00000509912 NCAPG2Q86XI2 1143 aa6.62□□□□□ -1.35
NEK1-204ENST00000509912 CPLX3Q8WVH0 158 aa6.62□□□□□ -1.35
NEK1-204ENST00000509912 PCDHB5Q9Y5E4 795 aa6.62□□□□□ -1.35
NEK1-204ENST00000509912 J3QW42 95 aa6.61□□□□□ -1.35
NEK1-204ENST00000509912 SPINT1O43278 529 aa6.61□□□□□ -1.35
NEK1-204ENST00000509912 MARCH6O60337 910 aa6.61□□□□□ -1.35
NEK1-204ENST00000509912 APOBRQ0VD83 1088 aa6.61□□□□□ -1.35
NEK1-204ENST00000509912 TRIM67Q6ZTA4 783 aa6.61□□□□□ -1.35
NEK1-204ENST00000509912 CYP4X1Q8N118 509 aa6.61□□□□□ -1.35
NEK1-204ENST00000509912 FNDC3AQ9Y2H6 1198 aaKnown RBP6.61□□□□□ -1.35
NEK1-204ENST00000509912 C4BP0C0L5 1744 aa6.61□□□□□ -1.35
NEK1-204ENST00000509912 IBTKQ9P2D0 1353 aaPredicted RBP6.61□□□□□ -1.35
NEK1-204ENST00000509912 CAPN5O15484 640 aaPredicted RBP6.61□□□□□ -1.35
NEK1-204ENST00000509912 KCNQ2O43526 872 aa6.61□□□□□ -1.35
NEK1-204ENST00000509912 CDC25BP30305 580 aa6.61□□□□□ -1.35
NEK1-204ENST00000509912 TBC1D8BQ0IIM8 1120 aa6.61□□□□□ -1.35
NEK1-204ENST00000509912 ENC1O14682 589 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 HSP90AB1P08238 724 aaKnown RBP6.6□□□□□ -1.35
NEK1-204ENST00000509912 IL2RBP14784 551 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 NCLP19338 710 aaKnown RBP6.6□□□□□ -1.35
NEK1-204ENST00000509912 NFKB1P19838 968 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 YY1P25490 414 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 MCM4P33991 863 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 FILIP1Q7Z7B0 1213 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 DHX37Q8IY37 1157 aaKnown RBP6.6□□□□□ -1.35
NEK1-204ENST00000509912 SNIP1Q8TAD8 396 aaKnown RBP6.6□□□□□ -1.35
NEK1-204ENST00000509912 RNPC3Q96LT9 517 aaKnown RBP6.6□□□□□ -1.35
NEK1-204ENST00000509912 GSTT1P30711 240 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 RUFY4Q6ZNE9 571 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 GALNT12Q8IXK2 581 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 TMEM74Q96NL1 305 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 HCSTQ9UBK5 93 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 BRCA1P38398 1863 aaKnown RBP6.6□□□□□ -1.35
NEK1-204ENST00000509912 B2RBV5 119 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 RBAK-RBAKDNI3L0D1 243 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 THBS1P07996 1170 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 RIPOR1Q6ZS17 1223 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 OSMRQ99650 979 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 TNKS2Q9H2K2 1166 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 SUV39H2Q9H5I1 410 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 PFDN2Q9UHV9 154 aa6.6□□□□□ -1.35
NEK1-204ENST00000509912 USP47Q96K76 1375 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 TJP1Q07157 1748 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 EXOC5O00471 708 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 SMAD7O15105 426 aaKnown RBP6.59□□□□□ -1.35
NEK1-204ENST00000509912 GRIN3BO60391 1043 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 RARAP10276 462 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 FAAP100Q0VG06 881 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 SERINC3Q13530 473 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 DDB1Q16531 1140 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 TTC39BQ5VTQ0 682 aaPredicted RBP6.59□□□□□ -1.35
NEK1-204ENST00000509912 GK5Q6ZS86 529 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 TOM1L2Q6ZVM7 507 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 LYSMD3Q7Z3D4 306 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 ZNF598Q86UK7 904 aaKnown RBP6.59□□□□□ -1.35
NEK1-204ENST00000509912 DNAJC7Q99615 494 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 TSEN34Q9BSV6 310 aaKnown RBP6.59□□□□□ -1.35
NEK1-204ENST00000509912 FANCLQ9NW38 375 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 PXDNLA1KZ92 1463 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 ERVV-2B6SEH9 535 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 RASA3Q14644 834 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 PPP2R5EQ16537 467 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 PHC3Q8NDX5 983 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 MRFAP1L1Q96HT8 127 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 MTFR1LQ9H019 292 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 LIN7BQ9HAP6 207 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 IFT57Q9NWB7 429 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 FAM13BQ9NYF5 915 aa6.59□□□□□ -1.35
NEK1-204ENST00000509912 COL3A1P02461 1466 aaPredicted RBP6.59□□□□□ -1.36
NEK1-204ENST00000509912 GDF9O60383 454 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 F13A1P00488 732 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 TFE3P19532 575 aaPredicted RBP6.58□□□□□ -1.36
NEK1-204ENST00000509912 CDK8P49336 464 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 RNF144AP50876 292 aaPredicted RBP6.58□□□□□ -1.36
NEK1-204ENST00000509912 ATP11AP98196 1134 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 CAMK2GQ13555 558 aaPredicted RBP6.58□□□□□ -1.36
NEK1-204ENST00000509912 PTPROQ16827 1216 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 LARP1BQ659C4 914 aaKnown RBP6.58□□□□□ -1.36
NEK1-204ENST00000509912 PRPF40BQ6NWY9 871 aaKnown RBP6.58□□□□□ -1.36
NEK1-204ENST00000509912 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.58□□□□□ -1.36
NEK1-204ENST00000509912 LILRB2Q8N423 598 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 DEPDC7Q96QD5 511 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 TCF12Q99081 682 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 ANTXR1Q9H6X2 564 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 G3BP2Q9UN86 482 aaKnown RBP6.58□□□□□ -1.36
NEK1-204ENST00000509912 PCDH11XQ9BZA7 1347 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 PCDH11YQ9BZA8 1340 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 ADCY9O60503 1353 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 BCORQ6W2J9 1755 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 hCG_2014768A0A024R1R8 64 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 ST13P50502 369 aaKnown RBP6.58□□□□□ -1.36
NEK1-204ENST00000509912 TKFCQ3LXA3 575 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 AMOTQ4VCS5 1084 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 SNAP47Q5SQN1 464 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms