RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 CCDC129Q6ZRS4 1044 aa21.44■■□□□ 1.02
SMN1-204ENST00000506163 PRRT2Q7Z6L0 340 aaPredicted RBP21.44■■□□□ 1.02
SMN1-204ENST00000506163 TRIM34Q9BYJ4 488 aa21.44■■□□□ 1.02
SMN1-204ENST00000506163 EPB41L4AQ9HCS5 686 aaPredicted RBP21.44■■□□□ 1.02
SMN1-204ENST00000506163 TRIM75PA6NK02 468 aa21.43■■□□□ 1.02
SMN1-204ENST00000506163 GPR25O00155 361 aa21.43■■□□□ 1.02
SMN1-204ENST00000506163 SPP2Q13103 211 aa21.43■■□□□ 1.02
SMN1-204ENST00000506163 PTPRFP10586 1907 aa21.42■■□□□ 1.02
SMN1-204ENST00000506163 USP17L5A8MUK1 530 aa21.42■■□□□ 1.02
SMN1-204ENST00000506163 FOXP2O15409 715 aa21.42■■□□□ 1.02
SMN1-204ENST00000506163 LRRFIP1Q32MZ4 808 aaKnown RBP21.42■■□□□ 1.02
SMN1-204ENST00000506163 OTUD7BQ6GQQ9 843 aa21.42■■□□□ 1.02
SMN1-204ENST00000506163 ZNF296Q8WUU4 475 aaPredicted RBP21.42■■□□□ 1.02
SMN1-204ENST00000506163 FAM227BQ96M60 508 aa21.42■■□□□ 1.02
SMN1-204ENST00000506163 ZBTB21Q9ULJ3 1066 aa21.42■■□□□ 1.02
SMN1-204ENST00000506163 TRIM6-TRIM34B2RNG4 842 aa21.41■■□□□ 1.02
SMN1-204ENST00000506163 GH2P01242 217 aa21.41■■□□□ 1.02
SMN1-204ENST00000506163 GUCY1A2P33402 732 aa21.41■■□□□ 1.02
SMN1-204ENST00000506163 DGKZQ13574 1117 aa21.41■■□□□ 1.02
SMN1-204ENST00000506163 ZNF280CQ8ND82 737 aa21.41■■□□□ 1.02
SMN1-204ENST00000506163 RILPL2Q969X0 211 aa21.41■■□□□ 1.02
SMN1-204ENST00000506163 A0A0D9SFI3 127 aa21.4■■□□□ 1.02
SMN1-204ENST00000506163 ASNSP08243 561 aa21.4■■□□□ 1.02
SMN1-204ENST00000506163 CERKLQ49MI3 558 aaPredicted RBP21.4■■□□□ 1.02
SMN1-204ENST00000506163 ANKRD23Q86SG2 305 aa21.4■■□□□ 1.02
SMN1-204ENST00000506163 PATL2C9JE40 543 aaKnown RBP21.39■■□□□ 1.02
SMN1-204ENST00000506163 CAP1Q01518 475 aa21.39■■□□□ 1.02
SMN1-204ENST00000506163 TAF1CQ15572 869 aaPredicted RBP21.39■■□□□ 1.02
SMN1-204ENST00000506163 NOM1Q5C9Z4 860 aaKnown RBP21.39■■□□□ 1.02
SMN1-204ENST00000506163 GIMAP6Q6P9H5 292 aa21.39■■□□□ 1.02
SMN1-204ENST00000506163 WDR18Q9BV38 432 aa21.39■■□□□ 1.02
SMN1-204ENST00000506163 PDHXO00330 501 aa21.38■■□□□ 1.01
SMN1-204ENST00000506163 GSPT1P15170 499 aaKnown RBP21.38■■□□□ 1.01
SMN1-204ENST00000506163 CDK8P49336 464 aa21.38■■□□□ 1.01
SMN1-204ENST00000506163 NMIQ13287 307 aaPredicted RBP21.38■■□□□ 1.01
SMN1-204ENST00000506163 SBK1Q52WX2 424 aa21.38■■□□□ 1.01
SMN1-204ENST00000506163 SKAP1Q86WV1 359 aa21.38■■□□□ 1.01
SMN1-204ENST00000506163 IFNL3Q8IZI9 196 aa21.38■■□□□ 1.01
SMN1-204ENST00000506163 GNAT2P19087 354 aa21.38■■□□□ 1.01
SMN1-204ENST00000506163 ABCB5Q2M3G0 1257 aa21.38■■□□□ 1.01
SMN1-204ENST00000506163 TREML2Q5T2D2 321 aa21.38■■□□□ 1.01
SMN1-204ENST00000506163 VPS53Q5VIR6 699 aa21.38■■□□□ 1.01
SMN1-204ENST00000506163 GADL1Q6ZQY3 521 aa21.38■■□□□ 1.01
SMN1-204ENST00000506163 ZCCHC17Q9NP64 241 aaKnown RBP21.38■■□□□ 1.01
SMN1-204ENST00000506163 HELLSQ9NRZ9 838 aa21.38■■□□□ 1.01
SMN1-204ENST00000506163 GINM1Q9NU53 330 aa21.38■■□□□ 1.01
SMN1-204ENST00000506163 SDSP20132 328 aa21.37■■□□□ 1.01
SMN1-204ENST00000506163 HMGCS2P54868 508 aa21.37■■□□□ 1.01
SMN1-204ENST00000506163 SH3D19Q5HYK7 790 aa21.37■■□□□ 1.01
SMN1-204ENST00000506163 TTC22Q5TAA0 569 aa21.37■■□□□ 1.01
SMN1-204ENST00000506163 C16orf86Q6ZW13 317 aa21.37■■□□□ 1.01
SMN1-204ENST00000506163 FASTKD5Q7L8L6 764 aaKnown RBP21.37■■□□□ 1.01
SMN1-204ENST00000506163 ZNF589Q86UQ0 364 aaPredicted RBP21.37■■□□□ 1.01
SMN1-204ENST00000506163 TICAM2Q86XR7 235 aa21.37■■□□□ 1.01
SMN1-204ENST00000506163 TNS4Q8IZW8 715 aa21.37■■□□□ 1.01
SMN1-204ENST00000506163 DDRGK1Q96HY6 314 aa21.37■■□□□ 1.01
SMN1-204ENST00000506163 ZFYVE28Q9HCC9 887 aa21.37■■□□□ 1.01
SMN1-204ENST00000506163 SWAP70Q9UH65 585 aa21.37■■□□□ 1.01
SMN1-204ENST00000506163 FKTNO75072 461 aa21.36■■□□□ 1.01
SMN1-204ENST00000506163 APPP05067 770 aa21.36■■□□□ 1.01
SMN1-204ENST00000506163 CYP2C8P10632 490 aa21.36■■□□□ 1.01
SMN1-204ENST00000506163 AKR1B1P15121 316 aa21.36■■□□□ 1.01
SMN1-204ENST00000506163 BACE1P56817 501 aa21.36■■□□□ 1.01
SMN1-204ENST00000506163 MTMR2Q13614 643 aa21.36■■□□□ 1.01
SMN1-204ENST00000506163 SEPT2Q15019 361 aa21.36■■□□□ 1.01
SMN1-204ENST00000506163 ACER1Q8TDN7 264 aa21.36■■□□□ 1.01
SMN1-204ENST00000506163 TBC1D2Q9BYX2 928 aa21.36■■□□□ 1.01
SMN1-204ENST00000506163 ARPP21Q9UBL0 812 aaPredicted RBP21.36■■□□□ 1.01
SMN1-204ENST00000506163 ADGRA2Q96PE1 1338 aa21.35■■□□□ 1.01
SMN1-204ENST00000506163 MINDY4BA8MYZ0 360 aa21.35■■□□□ 1.01
SMN1-204ENST00000506163 TLR2O60603 784 aa21.35■■□□□ 1.01
SMN1-204ENST00000506163 RAB3GAP1Q15042 981 aa21.35■■□□□ 1.01
SMN1-204ENST00000506163 MCMDC2Q4G0Z9 681 aa21.35■■□□□ 1.01
SMN1-204ENST00000506163 STK11IPQ8N1F8 1099 aa21.35■■□□□ 1.01
SMN1-204ENST00000506163 AS3MTQ9HBK9 375 aa21.35■■□□□ 1.01
SMN1-204ENST00000506163 TDO2P48775 406 aa21.34■■□□□ 1.01
SMN1-204ENST00000506163 SIAH1Q8IUQ4 282 aa21.34■■□□□ 1.01
SMN1-204ENST00000506163 EMILIN3Q9NT22 766 aa21.34■■□□□ 1.01
SMN1-204ENST00000506163 AGTPBP1Q9UPW5 1226 aa21.34■■□□□ 1.01
SMN1-204ENST00000506163 C17orf99Q6UX52 265 aa21.33■■□□□ 1.01
SMN1-204ENST00000506163 CLEC10AQ8IUN9 316 aa21.33■■□□□ 1.01
SMN1-204ENST00000506163 PROCA1Q8NCQ7 364 aaPredicted RBP21.33■■□□□ 1.01
SMN1-204ENST00000506163 TAOK2Q9UL54 1235 aa21.33■■□□□ 1.01
SMN1-204ENST00000506163 A0A1W2PRG0 241 aa21.32■■□□□ 1
SMN1-204ENST00000506163 USP17L10C9JJH3 530 aa21.32■■□□□ 1
SMN1-204ENST00000506163 MPHOSPH10O00566 681 aaKnown RBP21.32■■□□□ 1
SMN1-204ENST00000506163 AMOTL1Q8IY63 956 aa21.32■■□□□ 1
SMN1-204ENST00000506163 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.32■■□□□ 1
SMN1-204ENST00000506163 MCOLN1Q9GZU1 580 aa21.32■■□□□ 1
SMN1-204ENST00000506163 CABP5Q9NP86 173 aa21.32■■□□□ 1
SMN1-204ENST00000506163 CPA4Q9UI42 421 aa21.32■■□□□ 1
SMN1-204ENST00000506163 TACC3Q9Y6A5 838 aa21.32■■□□□ 1
SMN1-204ENST00000506163 LOC285556D6RIA3 1793 aa21.32■■□□□ 1
SMN1-204ENST00000506163 ROBO3Q96MS0 1386 aa21.31■■□□□ 1
SMN1-204ENST00000506163 RASA1P20936 1047 aa21.31■■□□□ 1
SMN1-204ENST00000506163 SP3Q02447 781 aa21.31■■□□□ 1
SMN1-204ENST00000506163 CENPQQ7L2Z9 268 aaPredicted RBP21.31■■□□□ 1
SMN1-204ENST00000506163 CD99L2Q8TCZ2 262 aa21.31■■□□□ 1
SMN1-204ENST00000506163 IL25Q9H293 177 aa21.31■■□□□ 1
SMN1-204ENST00000506163 SLC45A1Q9Y2W3 748 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms