RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 PHKBQ93100 1093 aa13.08□□□□□ -0.32
NFKB1-205ENST00000505458 QSER1Q2KHR3 1735 aa13.07□□□□□ -0.32
NFKB1-205ENST00000505458 PPEF1O14829 653 aaPredicted RBP13.07□□□□□ -0.32
NFKB1-205ENST00000505458 POLR3DP05423 398 aaPredicted RBP13.07□□□□□ -0.32
NFKB1-205ENST00000505458 C12orf60Q5U649 245 aa13.07□□□□□ -0.32
NFKB1-205ENST00000505458 SMIM5Q71RC9 77 aa13.07□□□□□ -0.32
NFKB1-205ENST00000505458 CEP57L1Q8IYX8 460 aa13.07□□□□□ -0.32
NFKB1-205ENST00000505458 LZTS2Q9BRK4 669 aa13.07□□□□□ -0.32
NFKB1-205ENST00000505458 MCM9Q9NXL9 1143 aa13.07□□□□□ -0.32
NFKB1-205ENST00000505458 TACC3Q9Y6A5 838 aa13.07□□□□□ -0.32
NFKB1-205ENST00000505458 ATP6V0A2Q9Y487 856 aa13.07□□□□□ -0.32
NFKB1-205ENST00000505458 GPR75-ASB3A0A0A6YYF3 556 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 TSPY2A6NKD2 308 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 DTNBO60941 627 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 DDR1Q08345 913 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 SNW1Q13573 536 aaKnown RBP13.06□□□□□ -0.32
NFKB1-205ENST00000505458 TMTC3Q6ZXV5 915 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 RAB11FIP4Q86YS3 637 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 EYA3Q99504 573 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 SENP2Q9HC62 589 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 MKRN1Q9UHC7 482 aaKnown RBP13.06□□□□□ -0.32
NFKB1-205ENST00000505458 DDX60LQ5H9U9 1706 aaKnown RBP13.06□□□□□ -0.32
NFKB1-205ENST00000505458 ANKRD31Q8N7Z5 1873 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 DIS3L2Q8IYB7 885 aaKnown RBP13.06□□□□□ -0.32
NFKB1-205ENST00000505458 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
NFKB1-205ENST00000505458 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 SDF4Q9BRK5 362 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 GAKO14976 1311 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 FOCADQ5VW36 1801 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 KIF28PB7ZC32 967 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 GOLGA6L19H0YKK7 550 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 RXRAP19793 462 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 TPM4P67936 248 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 CAMK4Q16566 473 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 ANO6Q4KMQ2 910 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 TBC1D16Q8TBP0 767 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 BPIFA3Q9BQP9 254 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 SH3GLB2Q9NR46 395 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 CLIC4Q9Y696 253 aa13.06□□□□□ -0.32
NFKB1-205ENST00000505458 ZNF500O60304 480 aaPredicted RBP13.05□□□□□ -0.32
NFKB1-205ENST00000505458 ADCY5O95622 1261 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 ZNF165P49910 485 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 TROAPQ12815 778 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 OTUD7BQ6GQQ9 843 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 TXNRD3Q86VQ6 643 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 CCDC144CPQ8IYA2 1237 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 KAT14Q9H8E8 782 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 C10orf71Q711Q0 1435 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 CALML3P27482 149 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 CCDC24Q8N4L8 307 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 KRI1Q8N9T8 703 aaKnown RBP13.05□□□□□ -0.32
NFKB1-205ENST00000505458 PYM1Q9BRP8 204 aaKnown RBP13.05□□□□□ -0.32
NFKB1-205ENST00000505458 ZKSCAN3Q9BRR0 538 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 MYL10Q9BUA6 226 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 FAM13BQ9NYF5 915 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 PARP3Q9Y6F1 533 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 KRT2P35908 639 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 TRAPPC10P48553 1259 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 KIAA2012Q0VF49 1180 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 GALNT17Q6IS24 598 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 CKAP2LQ8IYA6 745 aa13.05□□□□□ -0.32
NFKB1-205ENST00000505458 RRAGDQ9NQL2 400 aaPredicted RBP13.05□□□□□ -0.32
NFKB1-205ENST00000505458 MYO1BO43795 1136 aa13.04□□□□□ -0.32
NFKB1-205ENST00000505458 AXDND1Q5T1B0 1012 aaPredicted RBP13.04□□□□□ -0.32
NFKB1-205ENST00000505458 KANK3Q6NY19 840 aa13.04□□□□□ -0.32
NFKB1-205ENST00000505458 RTFDC1Q9BY42 306 aaPredicted RBP13.04□□□□□ -0.32
NFKB1-205ENST00000505458 GOLPH3LQ9H4A5 285 aa13.04□□□□□ -0.32
NFKB1-205ENST00000505458 INCENPQ9NQS7 918 aa13.04□□□□□ -0.32
NFKB1-205ENST00000505458 MYO3BQ8WXR4 1341 aa13.04□□□□□ -0.32
NFKB1-205ENST00000505458 CDK5RAP2Q96SN8 1893 aa13.04□□□□□ -0.32
NFKB1-205ENST00000505458 CDC25BP30305 580 aa13.04□□□□□ -0.32
NFKB1-205ENST00000505458 PTPAQ15257 358 aa13.04□□□□□ -0.32
NFKB1-205ENST00000505458 TPRNQ4KMQ1 711 aa13.04□□□□□ -0.32
NFKB1-205ENST00000505458 SARM1Q6SZW1 724 aa13.04□□□□□ -0.32
NFKB1-205ENST00000505458 ZNF444Q8N0Y2 327 aaPredicted RBP13.04□□□□□ -0.32
NFKB1-205ENST00000505458 MKNK2Q9HBH9 465 aa13.04□□□□□ -0.32
NFKB1-205ENST00000505458 MASTLQ96GX5 879 aa13.04□□□□□ -0.32
NFKB1-205ENST00000505458 CBX8Q9HC52 389 aa13.04□□□□□ -0.32
NFKB1-205ENST00000505458 FKBP1AP62942 108 aaKnown RBP13.03□□□□□ -0.32
NFKB1-205ENST00000505458 RESP18Q5W5W9 173 aa13.03□□□□□ -0.32
NFKB1-205ENST00000505458 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.03□□□□□ -0.32
NFKB1-205ENST00000505458 TNS1Q9HBL0 1735 aaKnown RBP13.03□□□□□ -0.32
NFKB1-205ENST00000505458 WTIPA6NIX2 430 aaPredicted RBP13.03□□□□□ -0.32
NFKB1-205ENST00000505458 C6orf229H3BNL8 230 aa13.03□□□□□ -0.32
NFKB1-205ENST00000505458 SMARCA1P28370 1054 aa13.03□□□□□ -0.32
NFKB1-205ENST00000505458 SYKP43405 635 aa13.03□□□□□ -0.32
NFKB1-205ENST00000505458 FUT2Q10981 343 aa13.03□□□□□ -0.32
NFKB1-205ENST00000505458 NKX2-3Q8TAU0 364 aa13.03□□□□□ -0.32
NFKB1-205ENST00000505458 PHF20Q9BVI0 1012 aa13.03□□□□□ -0.32
NFKB1-205ENST00000505458 FTOQ9C0B1 505 aaKnown RBP eCLIP13.03□□□□□ -0.32
NFKB1-205ENST00000505458 HPSEQ9Y251 543 aa13.03□□□□□ -0.32
NFKB1-205ENST00000505458 BTDP43251 543 aa13.03□□□□□ -0.32
NFKB1-205ENST00000505458 GRIPAP1Q4V328 841 aa13.03□□□□□ -0.32
NFKB1-205ENST00000505458 MFSD14BQ5SR56 506 aa13.03□□□□□ -0.32
NFKB1-205ENST00000505458 TEX11Q8IYF3 940 aa13.03□□□□□ -0.32
NFKB1-205ENST00000505458 CCDC148Q8NFR7 591 aa13.03□□□□□ -0.32
NFKB1-205ENST00000505458 KIAA1468Q9P260 1216 aa13.03□□□□□ -0.32
NFKB1-205ENST00000505458 BECN2A8MW95 431 aa13.02□□□□□ -0.32
NFKB1-205ENST00000505458 SRGNP10124 158 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms