RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 ZSWIM5Q9P217 1185 aa6.9□□□□□ -1.3
GYPB-203ENST00000503255 PPM1HQ9ULR3 514 aa6.9□□□□□ -1.3
GYPB-203ENST00000503255 ST14Q9Y5Y6 855 aa6.9□□□□□ -1.3
GYPB-203ENST00000503255 KRTAP9-7A8MTY7 169 aa6.89□□□□□ -1.31
GYPB-203ENST00000503255 FMR1Q06787 632 aaKnown RBP eCLIP6.89□□□□□ -1.31
GYPB-203ENST00000503255 HDXQ7Z353 690 aa6.89□□□□□ -1.31
GYPB-203ENST00000503255 MFSD4AQ8N468 514 aa6.89□□□□□ -1.31
GYPB-203ENST00000503255 PCDHB5Q9Y5E4 795 aa6.89□□□□□ -1.31
GYPB-203ENST00000503255 CAPN6Q9Y6Q1 641 aa6.89□□□□□ -1.31
GYPB-203ENST00000503255 KRT1P04264 644 aa6.88□□□□□ -1.31
GYPB-203ENST00000503255 C1QTNF9P0C862 333 aa6.88□□□□□ -1.31
GYPB-203ENST00000503255 ERVFC1P60507 584 aa6.88□□□□□ -1.31
GYPB-203ENST00000503255 WIPI1Q5MNZ9 446 aaPredicted RBP6.88□□□□□ -1.31
GYPB-203ENST00000503255 PRAMEF13Q5VWM6 474 aa6.88□□□□□ -1.31
GYPB-203ENST00000503255 LETMD1Q6P1Q0 360 aa6.88□□□□□ -1.31
GYPB-203ENST00000503255 CDH24Q86UP0 819 aa6.88□□□□□ -1.31
GYPB-203ENST00000503255 NPAS4Q8IUM7 802 aa6.88□□□□□ -1.31
GYPB-203ENST00000503255 FBF1Q8TES7 1133 aa6.88□□□□□ -1.31
GYPB-203ENST00000503255 GAL3ST3Q96A11 431 aa6.88□□□□□ -1.31
GYPB-203ENST00000503255 SRCIN1Q9C0H9 1055 aa6.88□□□□□ -1.31
GYPB-203ENST00000503255 RNF19AQ9NV58 838 aa6.88□□□□□ -1.31
GYPB-203ENST00000503255 GRK4P32298 578 aa6.87□□□□□ -1.31
GYPB-203ENST00000503255 PDE4CQ08493 712 aa6.87□□□□□ -1.31
GYPB-203ENST00000503255 ALG1LQ6GMV1 187 aa6.87□□□□□ -1.31
GYPB-203ENST00000503255 LCNL1Q6ZST4 164 aa6.87□□□□□ -1.31
GYPB-203ENST00000503255 C1QL4Q86Z23 238 aa6.87□□□□□ -1.31
GYPB-203ENST00000503255 DPH2Q9BQC3 489 aaPredicted RBP6.87□□□□□ -1.31
GYPB-203ENST00000503255 NSUN3Q9H649 340 aaKnown RBP6.87□□□□□ -1.31
GYPB-203ENST00000503255 C12orf49Q9H741 205 aa6.87□□□□□ -1.31
GYPB-203ENST00000503255 DNAJC25-GNG10A0A024R161 153 aa6.86□□□□□ -1.31
GYPB-203ENST00000503255 GDNFP39905 211 aa6.86□□□□□ -1.31
GYPB-203ENST00000503255 TNK2Q07912 1038 aa6.86□□□□□ -1.31
GYPB-203ENST00000503255 SEPT6Q14141 434 aa6.86□□□□□ -1.31
GYPB-203ENST00000503255 RALGPS1Q5JS13 557 aa6.86□□□□□ -1.31
GYPB-203ENST00000503255 TTBK2Q6IQ55 1244 aa6.86□□□□□ -1.31
GYPB-203ENST00000503255 HID1Q8IV36 788 aa6.86□□□□□ -1.31
GYPB-203ENST00000503255 LRRC56Q8IYG6 542 aaPredicted RBP6.86□□□□□ -1.31
GYPB-203ENST00000503255 MFSD2AQ8NA29 543 aa6.86□□□□□ -1.31
GYPB-203ENST00000503255 SLAMF8Q9P0V8 285 aa6.86□□□□□ -1.31
GYPB-203ENST00000503255 TTF2Q9UNY4 1162 aaKnown RBP6.86□□□□□ -1.31
GYPB-203ENST00000503255 GIPC1O14908 333 aa6.85□□□□□ -1.31
GYPB-203ENST00000503255 BRD1O95696 1058 aa6.85□□□□□ -1.31
GYPB-203ENST00000503255 P4HBP07237 508 aaKnown RBP6.85□□□□□ -1.31
GYPB-203ENST00000503255 MAP3K11Q16584 847 aa6.85□□□□□ -1.31
GYPB-203ENST00000503255 TTC6Q86TZ1 520 aa6.85□□□□□ -1.31
GYPB-203ENST00000503255 ZSCAN29Q8IWY8 852 aaPredicted RBP6.85□□□□□ -1.31
GYPB-203ENST00000503255 BHLHE22Q8NFJ8 381 aaPredicted RBP6.85□□□□□ -1.31
GYPB-203ENST00000503255 FAM8A1Q9UBU6 413 aa6.85□□□□□ -1.31
GYPB-203ENST00000503255 SPG7Q9UQ90 795 aa6.85□□□□□ -1.31
GYPB-203ENST00000503255 TSPAN15O95858 294 aa6.84□□□□□ -1.31
GYPB-203ENST00000503255 CST3P01034 146 aaPredicted RBP6.84□□□□□ -1.31
GYPB-203ENST00000503255 HK2P52789 917 aa6.84□□□□□ -1.31
GYPB-203ENST00000503255 SCARA3Q6AZY7 606 aa6.84□□□□□ -1.31
GYPB-203ENST00000503255 ANKLE2Q86XL3 938 aa6.84□□□□□ -1.31
GYPB-203ENST00000503255 ANKRD24Q8TF21 1146 aa6.84□□□□□ -1.31
GYPB-203ENST00000503255 TOX2Q96NM4 488 aa6.84□□□□□ -1.31
GYPB-203ENST00000503255 ASB16Q96NS5 453 aa6.84□□□□□ -1.31
GYPB-203ENST00000503255 KRTAP4-2Q9BYR5 136 aa6.84□□□□□ -1.31
GYPB-203ENST00000503255 SNCAIPQ9Y6H5 919 aa6.84□□□□□ -1.31
GYPB-203ENST00000503255 GFRA2O00451 464 aa6.83□□□□□ -1.32
GYPB-203ENST00000503255 ESR1P03372 595 aa6.83□□□□□ -1.32
GYPB-203ENST00000503255 TRHRP34981 398 aaPredicted RBP6.83□□□□□ -1.32
GYPB-203ENST00000503255 CAP2P40123 477 aa6.83□□□□□ -1.32
GYPB-203ENST00000503255 C22orf34Q6ZV56 151 aa6.83□□□□□ -1.32
GYPB-203ENST00000503255 SV2BQ7L1I2 683 aa6.83□□□□□ -1.32
GYPB-203ENST00000503255 ALPK1Q96QP1 1244 aa6.83□□□□□ -1.32
GYPB-203ENST00000503255 ADAMTS10Q9H324 1103 aa6.83□□□□□ -1.32
GYPB-203ENST00000503255 TJP2Q9UDY2 1190 aa6.83□□□□□ -1.32
GYPB-203ENST00000503255 IVNS1ABPQ9Y6Y0 642 aa6.83□□□□□ -1.32
GYPB-203ENST00000503255 LDHBP07195 334 aaKnown RBP6.82□□□□□ -1.32
GYPB-203ENST00000503255 ZSCAN22P10073 491 aaPredicted RBP6.82□□□□□ -1.32
GYPB-203ENST00000503255 ATP2B2Q01814 1243 aa6.82□□□□□ -1.32
GYPB-203ENST00000503255 ABHD4Q8TB40 342 aa6.82□□□□□ -1.32
GYPB-203ENST00000503255 NPIPB6E9PJ23 425 aa6.81□□□□□ -1.32
GYPB-203ENST00000503255 CCDC85BQ15834 202 aaPredicted RBP6.81□□□□□ -1.32
GYPB-203ENST00000503255 CREG2Q8IUH2 290 aa6.81□□□□□ -1.32
GYPB-203ENST00000503255 FBXO15Q8NCQ5 510 aaPredicted RBP6.81□□□□□ -1.32
GYPB-203ENST00000503255 PPP1R16BQ96T49 567 aa6.81□□□□□ -1.32
GYPB-203ENST00000503255 DCP1AQ9NPI6 582 aaPredicted RBP6.81□□□□□ -1.32
GYPB-203ENST00000503255 NFIBO00712 420 aa6.8□□□□□ -1.32
GYPB-203ENST00000503255 PGRP06401 933 aa6.8□□□□□ -1.32
GYPB-203ENST00000503255 KRTAP19-4Q3LI73 84 aa6.8□□□□□ -1.32
GYPB-203ENST00000503255 THAP5Q7Z6K1 395 aa6.8□□□□□ -1.32
GYPB-203ENST00000503255 ZSCAN18Q8TBC5 510 aaPredicted RBP6.8□□□□□ -1.32
GYPB-203ENST00000503255 Q96M66 194 aa6.8□□□□□ -1.32
GYPB-203ENST00000503255 C19orf44Q9H6X5 657 aa6.8□□□□□ -1.32
GYPB-203ENST00000503255 TMEM253P0C7T8 217 aa6.79□□□□□ -1.32
GYPB-203ENST00000503255 ATG14Q6ZNE5 492 aa6.79□□□□□ -1.32
GYPB-203ENST00000503255 MYLIPQ8WY64 445 aa6.79□□□□□ -1.32
GYPB-203ENST00000503255 JARID2Q92833 1246 aaPredicted RBP6.79□□□□□ -1.32
GYPB-203ENST00000503255 TMEM87BQ96K49 555 aa6.79□□□□□ -1.32
GYPB-203ENST00000503255 DUSP15Q9H1R2 295 aaPredicted RBP6.79□□□□□ -1.32
GYPB-203ENST00000503255 UPK3BL1B0FP48 263 aa6.78□□□□□ -1.32
GYPB-203ENST00000503255 UPK3BL2E5RIL1 263 aa6.78□□□□□ -1.32
GYPB-203ENST00000503255 ETV2O00321 342 aaPredicted RBP6.78□□□□□ -1.32
GYPB-203ENST00000503255 LMNB1P20700 586 aa6.78□□□□□ -1.32
GYPB-203ENST00000503255 CYP7A1P22680 504 aa6.78□□□□□ -1.32
GYPB-203ENST00000503255 EIF4BP23588 611 aaKnown RBP6.78□□□□□ -1.32
GYPB-203ENST00000503255 TPP2P29144 1249 aaPredicted RBP6.78□□□□□ -1.32
GYPB-203ENST00000503255 TLR6Q9Y2C9 796 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms