RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 DPYDQ12882 1025 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 MCMDC2Q4G0Z9 681 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 C1QTNF12Q5T7M4 302 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 PPP4R4Q6NUP7 873 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 ATG9AQ7Z3C6 839 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 ANKMY2Q8IV38 441 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 BRF1Q92994 677 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 GTF3C6Q969F1 213 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 SRPK1Q96SB4 655 aaKnown RBP10.35□□□□□ -0.75
FN1-227ENST00000498719 ZBTB3Q9H5J0 574 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 STRCP1A6NGW2 1772 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 TSPAN6O43657 245 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 RRM1P23921 792 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 VPS72Q15906 364 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 LRRC24Q50LG9 513 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 SPC24Q8NBT2 197 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 LEO1Q8WVC0 666 aaPredicted RBP10.35□□□□□ -0.75
FN1-227ENST00000498719 NUP62CLQ9H1M0 184 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 ALDH8A1Q9H2A2 487 aaPredicted RBP10.35□□□□□ -0.75
FN1-227ENST00000498719 FAM13BQ9NYF5 915 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 PKD1L3Q7Z443 1732 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 FAM221BA6H8Z2 402 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 LDHBP07195 334 aaKnown RBP10.34□□□□□ -0.75
FN1-227ENST00000498719 DAB2P98082 770 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 CEBPZQ03701 1054 aaKnown RBP10.34□□□□□ -0.75
FN1-227ENST00000498719 SCRN1Q12765 414 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 BRD3Q15059 726 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 NFE2Q16621 373 aaPredicted RBP10.34□□□□□ -0.75
FN1-227ENST00000498719 C14orf80Q86SX3 495 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 LUZP1Q86V48 1076 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 PLPP6Q8IY26 295 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 KBTBD3Q8NAB2 608 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 PGBD1Q96JS3 809 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 TBX3O15119 743 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 NR1I2O75469 434 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 CCDC192P0DO97 292 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 CDC27P30260 824 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 DNTTIP2Q5QJE6 756 aaKnown RBP10.34□□□□□ -0.75
FN1-227ENST00000498719 CC2D1AQ6P1N0 951 aaPredicted RBP10.34□□□□□ -0.75
FN1-227ENST00000498719 CCDC174Q6PII3 467 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 CHST3Q7LGC8 479 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 PUS3Q9BZE2 481 aaKnown RBP10.34□□□□□ -0.75
FN1-227ENST00000498719 MRVI1Q9Y6F6 885 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 ELP1O95163 1332 aa10.34□□□□□ -0.75
FN1-227ENST00000498719 GOLGA6L4A6NEF3 574 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 H7C1W4 665 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 FMNL1O95466 1100 aaPredicted RBP10.33□□□□□ -0.76
FN1-227ENST00000498719 TYRO3Q06418 890 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 FMR1Q06787 632 aaKnown RBP eCLIP10.33□□□□□ -0.76
FN1-227ENST00000498719 KRT32Q14532 448 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 ZRSR2Q15696 482 aaKnown RBP10.33□□□□□ -0.76
FN1-227ENST00000498719 MAP3K11Q16584 847 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 FTOQ9C0B1 505 aaKnown RBP eCLIP10.33□□□□□ -0.76
FN1-227ENST00000498719 PAG1Q9NWQ8 432 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 LAMB4A4D0S4 1761 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 KRT18P05783 430 aaKnown RBP10.33□□□□□ -0.76
FN1-227ENST00000498719 VDRP11473 427 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 COL6A1P12109 1028 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 ATF4P18848 351 aaPredicted RBP10.33□□□□□ -0.76
FN1-227ENST00000498719 MASP1P48740 699 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 CCT2P78371 535 aaKnown RBP10.33□□□□□ -0.76
FN1-227ENST00000498719 APOBRQ0VD83 1088 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 NOLC1Q14978 699 aaKnown RBP eCLIP10.33□□□□□ -0.761e-80■□□□□ 9.8
FN1-227ENST00000498719 DRC7Q8IY82 874 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 PIBF1Q8WXW3 757 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 PPM1EQ8WY54 764 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 SCAND2PQ9GZW5 306 aaPredicted RBP10.33□□□□□ -0.76
FN1-227ENST00000498719 TNMDQ9H2S6 317 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 KCNF1Q9H3M0 494 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 NCOA5Q9HCD5 579 aaKnown RBP10.33□□□□□ -0.76
FN1-227ENST00000498719 CNTN3Q9P232 1028 aa10.33□□□□□ -0.76
FN1-227ENST00000498719 TJP1Q07157 1748 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 TNS3Q68CZ2 1445 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 H3BQV1 296 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 NPHP1O15259 732 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 CAND2O75155 1236 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 MAPK8P45983 427 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 RESTQ13127 1097 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 ANO6Q4KMQ2 910 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 INO80DQ53TQ3 878 aaPredicted RBP10.32□□□□□ -0.76
FN1-227ENST00000498719 IFFO2Q5TF58 517 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 SH3TC2Q8TF17 1288 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 CEP89Q96ST8 783 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 SRA1Q9HD15 236 aaKnown RBP10.32□□□□□ -0.76
FN1-227ENST00000498719 CWC25Q9NXE8 425 aaPredicted RBP10.32□□□□□ -0.76
FN1-227ENST00000498719 TREHO43280 583 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 CTDNEP1O95476 244 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 GLIPR1L2Q4G1C9 344 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 TTLL5Q6EMB2 1281 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 SASS6Q6UVJ0 657 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 BICD2Q8TD16 824 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 PYCARDQ9ULZ3 195 aa10.32□□□□□ -0.76
FN1-227ENST00000498719 NUP188Q5SRE5 1749 aa10.31□□□□□ -0.76
FN1-227ENST00000498719 SPATA31A3Q5VYP0 1347 aa10.31□□□□□ -0.76
FN1-227ENST00000498719 SH3TC1Q8TE82 1336 aa10.31□□□□□ -0.76
FN1-227ENST00000498719 A0A1B0GUL7 405 aa10.31□□□□□ -0.76
FN1-227ENST00000498719 HSPD1P10809 573 aaKnown RBP10.31□□□□□ -0.76
FN1-227ENST00000498719 NOS2P35228 1153 aa10.31□□□□□ -0.76
FN1-227ENST00000498719 KCNH2Q12809 1159 aa10.31□□□□□ -0.76
FN1-227ENST00000498719 RAPGEF1Q13905 1077 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms