RNA–Protein interactions for RNA: ENST00000495973.5

TBRG4-217, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 1 (best)

Gene TBRG4, Length 3,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-217ENST00000495973 ZNF500O60304 480 aaPredicted RBP12.84□□□□□ -0.35
TBRG4-217ENST00000495973 MMP1P03956 469 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 TFAP4Q01664 338 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 GRAPQ13588 217 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 ZNF827Q17R98 1081 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 ATL3Q6DD88 541 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 USP17L1Q7RTZ2 530 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 GRAPLQ8TC17 118 aaPredicted RBP12.84□□□□□ -0.35
TBRG4-217ENST00000495973 KIAA1468Q9P260 1216 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 DEXIO95424 95 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 CCDC144BQ3MJ40 725 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 RBM43Q6ZSC3 357 aaKnown RBP12.84□□□□□ -0.35
TBRG4-217ENST00000495973 CNNM3Q8NE01 707 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 WASF1Q92558 559 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 NOL10Q9BSC4 688 aaKnown RBP12.84□□□□□ -0.35
TBRG4-217ENST00000495973 PICALMQ13492 652 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 ZNF174Q15697 407 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 EARS2Q5JPH6 523 aaKnown RBP12.84□□□□□ -0.35
TBRG4-217ENST00000495973 USP49Q70CQ1 688 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 JMYQ8N9B5 988 aa12.84□□□□□ -0.35
TBRG4-217ENST00000495973 CTCFLQ8NI51 663 aaPredicted RBP12.84□□□□□ -0.35
TBRG4-217ENST00000495973 GPKOWQ92917 476 aaPredicted RBP eCLIP12.84□□□□□ -0.35
TBRG4-217ENST00000495973 LRP5O75197 1615 aa12.83□□□□□ -0.35
TBRG4-217ENST00000495973 CICQ96RK0 1608 aaPredicted RBP12.83□□□□□ -0.35
TBRG4-217ENST00000495973 MYH2Q9UKX2 1941 aa12.83□□□□□ -0.35
TBRG4-217ENST00000495973 GOLGA8HP0CJ92 632 aa12.83□□□□□ -0.36
TBRG4-217ENST00000495973 IQCB1Q15051 598 aa12.83□□□□□ -0.36
TBRG4-217ENST00000495973 LONRF3Q496Y0 759 aa12.83□□□□□ -0.36
TBRG4-217ENST00000495973 STAMQ92783 540 aa12.83□□□□□ -0.36
TBRG4-217ENST00000495973 UQCRHLA0A096LP55 91 aa12.83□□□□□ -0.36
TBRG4-217ENST00000495973 UQCRHP07919 91 aa12.83□□□□□ -0.36
TBRG4-217ENST00000495973 TOB1P50616 345 aaPredicted RBP12.83□□□□□ -0.36
TBRG4-217ENST00000495973 ST5P78524 1137 aa12.83□□□□□ -0.36
TBRG4-217ENST00000495973 SEC23AQ15436 765 aa12.83□□□□□ -0.36
TBRG4-217ENST00000495973 TMTC2Q8N394 836 aa12.83□□□□□ -0.36
TBRG4-217ENST00000495973 TDRD7Q8NHU6 1098 aaKnown RBP12.83□□□□□ -0.36
TBRG4-217ENST00000495973 POLR2DO15514 142 aaKnown RBP12.82□□□□□ -0.36
TBRG4-217ENST00000495973 RAD21O60216 631 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 GYS1P13807 737 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 CASP1P29466 404 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 NBPF11Q86T75 865 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 DHX40Q8IX18 779 aaKnown RBP12.82□□□□□ -0.36
TBRG4-217ENST00000495973 MXD3Q9BW11 206 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 TRPC5Q9UL62 973 aaPredicted RBP12.82□□□□□ -0.36
TBRG4-217ENST00000495973 KCNH3Q9ULD8 1083 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 A0A1W2PQ27 194 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 A0A1W2PQ64 194 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 A0A1W2PQD8 194 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 CMA1P23946 247 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 PDE4BQ07343 736 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 PTPAQ15257 358 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 ZNF804AQ7Z570 1209 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 RASGRP4Q8TDF6 673 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 ZNF592Q92610 1267 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 BRIP1Q9BX63 1249 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 VAT1LQ9HCJ6 419 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 AFMP43652 599 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 EIF6P56537 245 aaKnown RBP12.82□□□□□ -0.36
TBRG4-217ENST00000495973 SHISA4Q96DD7 197 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 C16orf45Q96MC5 204 aaPredicted RBP12.82□□□□□ -0.36
TBRG4-217ENST00000495973 MAP3K14Q99558 947 aa12.82□□□□□ -0.36
TBRG4-217ENST00000495973 NAT10Q9H0A0 1025 aaKnown RBP12.82□□□□□ -0.36
TBRG4-217ENST00000495973 BTAF1O14981 1849 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 WNT7AO00755 349 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 PLCD1P51178 756 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 KRI1Q8N9T8 703 aaKnown RBP12.81□□□□□ -0.36
TBRG4-217ENST00000495973 MYH13Q9UKX3 1938 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 XDHP47989 1333 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 ADAMTS3O15072 1205 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 TSPY3P0CV98 308 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 TSPY8P0CW00 308 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 U2AF2P26368 475 aaKnown RBP eCLIP12.81□□□□□ -0.363e-13■■■□□ 17.3
TBRG4-217ENST00000495973 NLRP5P59047 1200 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 DOK7Q18PE1 504 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 MFSD14BQ5SR56 506 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 HOMER1Q86YM7 354 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 CREBRFQ8IUR6 639 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 SRBD1Q8N5C6 995 aaKnown RBP12.81□□□□□ -0.36
TBRG4-217ENST00000495973 KAT14Q9H8E8 782 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 GGA1Q9UJY5 639 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 COBLO75128 1261 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 XBP1P17861 261 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 GTF2IP78347 998 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 PIK3AP1Q6ZUJ8 805 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 STAG2Q8N3U4 1231 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 DHX58Q96C10 678 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 TRMT1Q9NXH9 659 aaKnown RBP12.81□□□□□ -0.36
TBRG4-217ENST00000495973 IFNKQ9P0W0 207 aa12.81□□□□□ -0.36
TBRG4-217ENST00000495973 VGLL3A8MV65 326 aa12.8□□□□□ -0.36
TBRG4-217ENST00000495973 G3V3G9 751 aa12.8□□□□□ -0.36
TBRG4-217ENST00000495973 ATP1A3P13637 1013 aa12.8□□□□□ -0.36
TBRG4-217ENST00000495973 BTDP43251 543 aa12.8□□□□□ -0.36
TBRG4-217ENST00000495973 PDE4CQ08493 712 aa12.8□□□□□ -0.36
TBRG4-217ENST00000495973 DCAF8Q5TAQ9 597 aa12.8□□□□□ -0.36
TBRG4-217ENST00000495973 PLCD3Q8N3E9 789 aa12.8□□□□□ -0.36
TBRG4-217ENST00000495973 CACTINQ8WUQ7 758 aaKnown RBP12.8□□□□□ -0.36
TBRG4-217ENST00000495973 SERTAD1Q9UHV2 236 aa12.8□□□□□ -0.36
TBRG4-217ENST00000495973 DDR1Q08345 913 aa12.8□□□□□ -0.36
TBRG4-217ENST00000495973 SPTY2D1Q68D10 685 aaPredicted RBP12.8□□□□□ -0.36
TBRG4-217ENST00000495973 ZNF444Q8N0Y2 327 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms