RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 SKAP1Q86WV1 359 aa20.56■□□□□ 0.88
SNX17-209ENST00000494893 FAM43AQ8N2R8 423 aa20.56■□□□□ 0.88
SNX17-209ENST00000494893 SLC44A5Q8NCS7 719 aa20.56■□□□□ 0.88
SNX17-209ENST00000494893 RILPL2Q969X0 211 aa20.56■□□□□ 0.88
SNX17-209ENST00000494893 CFHR5Q9BXR6 569 aa20.56■□□□□ 0.88
SNX17-209ENST00000494893 PRDM10Q9NQV6 1147 aa20.56■□□□□ 0.88
SNX17-209ENST00000494893 BAZ2AQ9UIF9 1905 aaKnown RBP20.56■□□□□ 0.88
SNX17-209ENST00000494893 ATAD5Q96QE3 1844 aa20.55■□□□□ 0.88
SNX17-209ENST00000494893 CETPP11597 493 aa20.55■□□□□ 0.88
SNX17-209ENST00000494893 TTC22Q5TAA0 569 aa20.55■□□□□ 0.88
SNX17-209ENST00000494893 BTBD19C9JJ37 291 aa20.54■□□□□ 0.88
SNX17-209ENST00000494893 CXCL11O14625 94 aa20.54■□□□□ 0.88
SNX17-209ENST00000494893 NMIQ13287 307 aaPredicted RBP20.54■□□□□ 0.88
SNX17-209ENST00000494893 GIMAP6Q6P9H5 292 aa20.54■□□□□ 0.88
SNX17-209ENST00000494893 TRIM34Q9BYJ4 488 aa20.54■□□□□ 0.88
SNX17-209ENST00000494893 ZBTB21Q9ULJ3 1066 aa20.54■□□□□ 0.88
SNX17-209ENST00000494893 A0A0G2JLL6 359 aaPredicted RBP20.53■□□□□ 0.88
SNX17-209ENST00000494893 SDSP20132 328 aa20.53■□□□□ 0.88
SNX17-209ENST00000494893 SBK1Q52WX2 424 aa20.53■□□□□ 0.88
SNX17-209ENST00000494893 VPS53Q5VIR6 699 aa20.53■□□□□ 0.88
SNX17-209ENST00000494893 GPAT2Q6NUI2 795 aa20.53■□□□□ 0.88
SNX17-209ENST00000494893 PRRT2Q7Z6L0 340 aaPredicted RBP20.53■□□□□ 0.88
SNX17-209ENST00000494893 TICAM2Q86XR7 235 aa20.53■□□□□ 0.88
SNX17-209ENST00000494893 HELLSQ9NRZ9 838 aa20.53■□□□□ 0.88
SNX17-209ENST00000494893 TRIM75PA6NK02 468 aa20.52■□□□□ 0.88
SNX17-209ENST00000494893 USP17L5A8MUK1 530 aa20.52■□□□□ 0.88
SNX17-209ENST00000494893 PATL2C9JE40 543 aaKnown RBP20.52■□□□□ 0.88
SNX17-209ENST00000494893 GH2P01242 217 aa20.52■□□□□ 0.88
SNX17-209ENST00000494893 ASNSP08243 561 aa20.52■□□□□ 0.88
SNX17-209ENST00000494893 GNAT2P19087 354 aa20.52■□□□□ 0.88
SNX17-209ENST00000494893 GUCY1A2P33402 732 aa20.52■□□□□ 0.88
SNX17-209ENST00000494893 ZNF589Q86UQ0 364 aaPredicted RBP20.52■□□□□ 0.88
SNX17-209ENST00000494893 IFNL3Q8IZI9 196 aa20.52■□□□□ 0.88
SNX17-209ENST00000494893 ALDH1A1P00352 501 aa20.51■□□□□ 0.87
SNX17-209ENST00000494893 SPP2Q13103 211 aa20.51■□□□□ 0.87
SNX17-209ENST00000494893 CRHR2Q13324 411 aa20.51■□□□□ 0.87
SNX17-209ENST00000494893 DGKZQ13574 1117 aa20.51■□□□□ 0.87
SNX17-209ENST00000494893 CERKLQ49MI3 558 aaPredicted RBP20.51■□□□□ 0.87
SNX17-209ENST00000494893 C16orf86Q6ZW13 317 aa20.51■□□□□ 0.87
SNX17-209ENST00000494893 WDR18Q9BV38 432 aa20.51■□□□□ 0.87
SNX17-209ENST00000494893 GINM1Q9NU53 330 aa20.51■□□□□ 0.87
SNX17-209ENST00000494893 ARPP21Q9UBL0 812 aaPredicted RBP20.51■□□□□ 0.87
SNX17-209ENST00000494893 ROBO3Q96MS0 1386 aa20.5■□□□□ 0.87
SNX17-209ENST00000494893 CDK8P49336 464 aa20.5■□□□□ 0.87
SNX17-209ENST00000494893 ANKRD23Q86SG2 305 aa20.5■□□□□ 0.87
SNX17-209ENST00000494893 ZNF280CQ8ND82 737 aa20.5■□□□□ 0.87
SNX17-209ENST00000494893 PTPRFP10586 1907 aa20.5■□□□□ 0.87
SNX17-209ENST00000494893 GPR25O00155 361 aa20.49■□□□□ 0.87
SNX17-209ENST00000494893 ABCB5Q2M3G0 1257 aa20.49■□□□□ 0.87
SNX17-209ENST00000494893 MCMDC2Q4G0Z9 681 aa20.49■□□□□ 0.87
SNX17-209ENST00000494893 OTUD7BQ6GQQ9 843 aa20.49■□□□□ 0.87
SNX17-209ENST00000494893 DDRGK1Q96HY6 314 aa20.49■□□□□ 0.87
SNX17-209ENST00000494893 SWAP70Q9UH65 585 aa20.49■□□□□ 0.87
SNX17-209ENST00000494893 MINDY4BA8MYZ0 360 aa20.48■□□□□ 0.87
SNX17-209ENST00000494893 APPP05067 770 aa20.48■□□□□ 0.87
SNX17-209ENST00000494893 AKR1B1P15121 316 aa20.48■□□□□ 0.87
SNX17-209ENST00000494893 TDO2P48775 406 aa20.48■□□□□ 0.87
SNX17-209ENST00000494893 TAF1CQ15572 869 aaPredicted RBP20.48■□□□□ 0.87
SNX17-209ENST00000494893 NOM1Q5C9Z4 860 aaKnown RBP20.48■□□□□ 0.87
SNX17-209ENST00000494893 SH3D19Q5HYK7 790 aa20.48■□□□□ 0.87
SNX17-209ENST00000494893 ZNF296Q8WUU4 475 aaPredicted RBP20.48■□□□□ 0.87
SNX17-209ENST00000494893 TBC1D2Q9BYX2 928 aa20.48■□□□□ 0.87
SNX17-209ENST00000494893 IL25Q9H293 177 aa20.48■□□□□ 0.87
SNX17-209ENST00000494893 ZCCHC17Q9NP64 241 aaKnown RBP20.48■□□□□ 0.87
SNX17-209ENST00000494893 TAOK2Q9UL54 1235 aa20.48■□□□□ 0.87
SNX17-209ENST00000494893 PDHXO00330 501 aa20.47■□□□□ 0.87
SNX17-209ENST00000494893 HMGCS2P54868 508 aa20.47■□□□□ 0.87
SNX17-209ENST00000494893 SEPT2Q15019 361 aa20.47■□□□□ 0.87
SNX17-209ENST00000494893 TREML2Q5T2D2 321 aa20.47■□□□□ 0.87
SNX17-209ENST00000494893 GADL1Q6ZQY3 521 aa20.47■□□□□ 0.87
SNX17-209ENST00000494893 ADGRA2Q96PE1 1338 aa20.47■□□□□ 0.87
SNX17-209ENST00000494893 LOC285556D6RIA3 1793 aa20.46■□□□□ 0.87
SNX17-209ENST00000494893 BACE1P56817 501 aa20.46■□□□□ 0.87
SNX17-209ENST00000494893 CAP1Q01518 475 aa20.46■□□□□ 0.87
SNX17-209ENST00000494893 MTMR2Q13614 643 aa20.46■□□□□ 0.87
SNX17-209ENST00000494893 FASTKD5Q7L8L6 764 aaKnown RBP20.46■□□□□ 0.87
SNX17-209ENST00000494893 CLEC10AQ8IUN9 316 aa20.46■□□□□ 0.87
SNX17-209ENST00000494893 AMOTL1Q8IY63 956 aa20.46■□□□□ 0.87
SNX17-209ENST00000494893 STK11IPQ8N1F8 1099 aa20.46■□□□□ 0.87
SNX17-209ENST00000494893 ACER1Q8TDN7 264 aa20.46■□□□□ 0.87
SNX17-209ENST00000494893 AS3MTQ9HBK9 375 aa20.46■□□□□ 0.87
SNX17-209ENST00000494893 TACC3Q9Y6A5 838 aa20.46■□□□□ 0.87
SNX17-209ENST00000494893 CCDC171Q6TFL3 1326 aa20.46■□□□□ 0.87
SNX17-209ENST00000494893 CASP8AP2Q9UKL3 1982 aa20.45■□□□□ 0.86
SNX17-209ENST00000494893 HSPD1P10809 573 aaKnown RBP20.45■□□□□ 0.86
SNX17-209ENST00000494893 RASA1P20936 1047 aa20.45■□□□□ 0.86
SNX17-209ENST00000494893 RAB3GAP1Q15042 981 aa20.45■□□□□ 0.86
SNX17-209ENST00000494893 ALX1Q15699 326 aa20.45■□□□□ 0.86
SNX17-209ENST00000494893 CWC27Q6UX04 472 aaKnown RBP20.45■□□□□ 0.86
SNX17-209ENST00000494893 SIAH1Q8IUQ4 282 aa20.45■□□□□ 0.86
SNX17-209ENST00000494893 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.45■□□□□ 0.86
SNX17-209ENST00000494893 NACAP1Q9BZK3 213 aa20.45■□□□□ 0.86
SNX17-209ENST00000494893 NAPBQ9H115 298 aa20.45■□□□□ 0.86
SNX17-209ENST00000494893 A0A1W2PRG0 241 aa20.44■□□□□ 0.86
SNX17-209ENST00000494893 USP17L10C9JJH3 530 aa20.44■□□□□ 0.86
SNX17-209ENST00000494893 PPARAQ07869 468 aa20.44■□□□□ 0.86
SNX17-209ENST00000494893 PROCA1Q8NCQ7 364 aaPredicted RBP20.44■□□□□ 0.86
SNX17-209ENST00000494893 ZFYVE28Q9HCC9 887 aa20.44■□□□□ 0.86
SNX17-209ENST00000494893 CABP5Q9NP86 173 aa20.44■□□□□ 0.86
SNX17-209ENST00000494893 DIAPH3Q9NSV4 1193 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms