RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 MDFIQ99750 246 aa7.21□□□□□ -1.26
PTCD3-219ENST00000494323 CHRDQ9H2X0 955 aa7.21□□□□□ -1.26
PTCD3-219ENST00000494323 CD163L1Q9NR16 1453 aa7.21□□□□□ -1.26
PTCD3-219ENST00000494323 PNPLA7Q6ZV29 1317 aa7.21□□□□□ -1.26
PTCD3-219ENST00000494323 TNS2Q63HR2 1409 aa7.2□□□□□ -1.26
PTCD3-219ENST00000494323 RECKO95980 971 aa7.2□□□□□ -1.26
PTCD3-219ENST00000494323 NRLP54845 237 aa7.2□□□□□ -1.26
PTCD3-219ENST00000494323 DHX32Q7L7V1 743 aaKnown RBP7.2□□□□□ -1.26
PTCD3-219ENST00000494323 ZCRB1Q8TBF4 217 aaKnown RBP7.2□□□□□ -1.26
PTCD3-219ENST00000494323 LTN1O94822 1766 aa7.2□□□□□ -1.26
PTCD3-219ENST00000494323 BTAF1O14981 1849 aa7.2□□□□□ -1.26
PTCD3-219ENST00000494323 ST20-MTHFSA0A0A6YYL1 179 aa7.19□□□□□ -1.26
PTCD3-219ENST00000494323 PROCP04070 461 aa7.19□□□□□ -1.26
PTCD3-219ENST00000494323 HOXC9P31274 260 aa7.19□□□□□ -1.26
PTCD3-219ENST00000494323 HYAL2Q12891 473 aa7.19□□□□□ -1.26
PTCD3-219ENST00000494323 RRS1Q15050 365 aaKnown RBP7.19□□□□□ -1.26
PTCD3-219ENST00000494323 NBPF6Q5VWK0 638 aa7.19□□□□□ -1.26
PTCD3-219ENST00000494323 MSL1Q68DK7 614 aa7.19□□□□□ -1.26
PTCD3-219ENST00000494323 COL23A1Q86Y22 540 aaPredicted RBP7.19□□□□□ -1.26
PTCD3-219ENST00000494323 USHBP1Q8N6Y0 703 aa7.19□□□□□ -1.26
PTCD3-219ENST00000494323 TRIM11Q96F44 468 aa7.19□□□□□ -1.26
PTCD3-219ENST00000494323 COG3Q96JB2 828 aa7.19□□□□□ -1.26
PTCD3-219ENST00000494323 NBPF4Q96M43 638 aa7.19□□□□□ -1.26
PTCD3-219ENST00000494323 CCNL1Q9UK58 526 aaPredicted RBP7.19□□□□□ -1.26
PTCD3-219ENST00000494323 MAP3K19Q56UN5 1328 aa7.19□□□□□ -1.26
PTCD3-219ENST00000494323 A0A1W2PP64 1363 aa7.19□□□□□ -1.26
PTCD3-219ENST00000494323 NHSQ6T4R5 1651 aa7.19□□□□□ -1.26
PTCD3-219ENST00000494323 SPDYE3A6NKU9 549 aa7.18□□□□□ -1.26
PTCD3-219ENST00000494323 M0R082 166 aa7.18□□□□□ -1.26
PTCD3-219ENST00000494323 EREGO14944 169 aa7.18□□□□□ -1.26
PTCD3-219ENST00000494323 CYP2E1P05181 493 aaPredicted RBP7.18□□□□□ -1.26
PTCD3-219ENST00000494323 EDN3P14138 238 aa7.18□□□□□ -1.26
PTCD3-219ENST00000494323 YBX3P16989 372 aaKnown RBP eCLIP7.18□□□□□ -1.26
PTCD3-219ENST00000494323 GPLD1P80108 840 aa7.18□□□□□ -1.26
PTCD3-219ENST00000494323 TBC1D8BQ0IIM8 1120 aa7.18□□□□□ -1.26
PTCD3-219ENST00000494323 USPL1Q5W0Q7 1092 aa7.18□□□□□ -1.26
PTCD3-219ENST00000494323 GALNT12Q8IXK2 581 aa7.18□□□□□ -1.26
PTCD3-219ENST00000494323 ZNF417Q8TAU3 575 aa7.18□□□□□ -1.26
PTCD3-219ENST00000494323 TRPM4Q8TD43 1214 aa7.18□□□□□ -1.26
PTCD3-219ENST00000494323 CCDC74AQ96AQ1 378 aa7.18□□□□□ -1.26
PTCD3-219ENST00000494323 FRMD6Q96NE9 622 aa7.18□□□□□ -1.26
PTCD3-219ENST00000494323 ZNF587Q96SQ5 575 aaPredicted RBP7.18□□□□□ -1.26
PTCD3-219ENST00000494323 PLVAPQ9BX97 442 aa7.18□□□□□ -1.26
PTCD3-219ENST00000494323 UBE2OQ9C0C9 1292 aaKnown RBP7.18□□□□□ -1.26
PTCD3-219ENST00000494323 WWC3Q9ULE0 1092 aa7.18□□□□□ -1.26
PTCD3-219ENST00000494323 EDC4Q6P2E9 1401 aaKnown RBP7.18□□□□□ -1.26
PTCD3-219ENST00000494323 KIF4AO95239 1232 aa7.17□□□□□ -1.26
PTCD3-219ENST00000494323 MRPL58Q14197 206 aaKnown RBP7.17□□□□□ -1.26
PTCD3-219ENST00000494323 MPRIPQ6WCQ1 1025 aa7.17□□□□□ -1.26
PTCD3-219ENST00000494323 SMIM5Q71RC9 77 aa7.17□□□□□ -1.26
PTCD3-219ENST00000494323 TESK2Q96S53 571 aa7.17□□□□□ -1.26
PTCD3-219ENST00000494323 IGFLR1Q9H665 355 aa7.17□□□□□ -1.26
PTCD3-219ENST00000494323 DNAJB12Q9NXW2 375 aaKnown RBP7.17□□□□□ -1.26
PTCD3-219ENST00000494323 KANSL3Q9P2N6 904 aa7.17□□□□□ -1.26
PTCD3-219ENST00000494323 SALL4Q9UJQ4 1053 aa7.17□□□□□ -1.26
PTCD3-219ENST00000494323 MON2Q7Z3U7 1717 aa7.17□□□□□ -1.26
PTCD3-219ENST00000494323 MAP3K5Q99683 1374 aa7.17□□□□□ -1.26
PTCD3-219ENST00000494323 ABCC6O95255 1503 aa7.17□□□□□ -1.26
PTCD3-219ENST00000494323 RGPD2P0DJD1 1756 aa7.16□□□□□ -1.26
PTCD3-219ENST00000494323 FYB1O15117 783 aa7.16□□□□□ -1.26
PTCD3-219ENST00000494323 IGSF3O75054 1194 aa7.16□□□□□ -1.26
PTCD3-219ENST00000494323 ALBP02768 609 aa7.16□□□□□ -1.26
PTCD3-219ENST00000494323 SPATA31C1P0DKV0 1188 aa7.16□□□□□ -1.26
PTCD3-219ENST00000494323 TCF3P15923 654 aa7.16□□□□□ -1.26
PTCD3-219ENST00000494323 HSP90AB2PQ58FF8 381 aa7.16□□□□□ -1.26
PTCD3-219ENST00000494323 NCAPG2Q86XI2 1143 aa7.16□□□□□ -1.26
PTCD3-219ENST00000494323 SPACA7Q96KW9 195 aa7.16□□□□□ -1.26
PTCD3-219ENST00000494323 PUS7Q96PZ0 661 aaKnown RBP7.16□□□□□ -1.26
PTCD3-219ENST00000494323 DUSP9Q99956 384 aaKnown RBP7.16□□□□□ -1.26
PTCD3-219ENST00000494323 SPG7Q9UQ90 795 aa7.16□□□□□ -1.26
PTCD3-219ENST00000494323 STARD13Q9Y3M8 1113 aa7.16□□□□□ -1.26
PTCD3-219ENST00000494323 ANKRD36BQ8N2N9 1353 aa7.16□□□□□ -1.26
PTCD3-219ENST00000494323 PAPPAQ13219 1627 aa7.16□□□□□ -1.26
PTCD3-219ENST00000494323 GOLGB1Q14789 3259 aaKnown RBP7.16□□□□□ -1.26
PTCD3-219ENST00000494323 LOC102724428A0A0B4J2F2 783 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 C1QTNF9BB2RNN3 333 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 GIPC1O14908 333 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 GRIN3BO60391 1043 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 POLR3DP05423 398 aaPredicted RBP7.15□□□□□ -1.26
PTCD3-219ENST00000494323 GNA15P30679 374 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 SIK1P57059 783 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 PRRT3Q5FWE3 981 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 LDLRAD1Q5T700 205 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 MICALL1Q8N3F8 863 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 RAPGEF4Q8WZA2 1011 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 NSUN5Q96P11 429 aaKnown RBP7.15□□□□□ -1.26
PTCD3-219ENST00000494323 SETDB2Q96T68 719 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 RBSNQ9H1K0 784 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 PRDM6Q9NQX0 595 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 RNF19AQ9NV58 838 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 PARP2Q9UGN5 583 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 NSD2O96028 1365 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 USP47Q96K76 1375 aa7.15□□□□□ -1.26
PTCD3-219ENST00000494323 ZBTB42B2RXF5 422 aa7.14□□□□□ -1.27
PTCD3-219ENST00000494323 PPM1GO15355 546 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-219ENST00000494323 CHRNA4P43681 627 aa7.14□□□□□ -1.27
PTCD3-219ENST00000494323 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.14□□□□□ -1.27
PTCD3-219ENST00000494323 KIAA0319Q5VV43 1072 aa7.14□□□□□ -1.27
PTCD3-219ENST00000494323 C8orf86Q6ZUL3 223 aa7.14□□□□□ -1.27
PTCD3-219ENST00000494323 TMC4Q7Z404 712 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms