RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 TPCN1Q9ULQ1 816 aa7.81□□□□□ -1.16
FNDC3B-212ENST00000494000 WTIPA6NIX2 430 aaPredicted RBP7.81□□□□□ -1.16
FNDC3B-212ENST00000494000 PDE4BQ07343 736 aa7.81□□□□□ -1.16
FNDC3B-212ENST00000494000 KIAA2012Q0VF49 1180 aa7.81□□□□□ -1.16
FNDC3B-212ENST00000494000 SKOR2Q2VWA4 1001 aaPredicted RBP7.81□□□□□ -1.16
FNDC3B-212ENST00000494000 HHIPL2Q6UWX4 724 aa7.81□□□□□ -1.16
FNDC3B-212ENST00000494000 SYNE3Q6ZMZ3 975 aa7.81□□□□□ -1.16
FNDC3B-212ENST00000494000 SGMS1Q86VZ5 419 aa7.81□□□□□ -1.16
FNDC3B-212ENST00000494000 CXorf38Q8TB03 319 aa7.81□□□□□ -1.16
FNDC3B-212ENST00000494000 BRF1Q92994 677 aa7.81□□□□□ -1.16
FNDC3B-212ENST00000494000 ANGEL1Q9UNK9 670 aaKnown RBP7.81□□□□□ -1.16
FNDC3B-212ENST00000494000 MYO3BQ8WXR4 1341 aa7.81□□□□□ -1.16
FNDC3B-212ENST00000494000 SLX4Q8IY92 1834 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 MYH2Q9UKX2 1941 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 ORC4O43929 436 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 CDKL5O76039 1030 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 CPA1P15085 419 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 TERF1P54274 439 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 HAND2P61296 217 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 RAVER1Q8IY67 606 aaKnown RBP7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 OTUD6BQ8N6M0 293 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 DIS3Q9Y2L1 958 aaKnown RBP7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 CD2APQ9Y5K6 639 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 SNED1Q8TER0 1413 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 MCM4P33991 863 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 USP5P45974 858 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 CSPP1Q1MSJ5 1256 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 ADGRA1Q86SQ6 560 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 CCDC83Q8IWF9 413 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 GIPC2Q8TF65 315 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 TNPO1Q92973 898 aaKnown RBP7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 DCP1AQ9NPI6 582 aaPredicted RBP7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 AATFQ9NY61 560 aaKnown RBP eCLIP7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 PIM2Q9P1W9 311 aa7.8□□□□□ -1.16
FNDC3B-212ENST00000494000 NID2Q14112 1375 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 ROBO3Q96MS0 1386 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 CCDC196A0A1B0GTZ2 297 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 GTF2IP78347 998 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 NBPF20Q3BBV1 942 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 IQCA1Q86XH1 822 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 TBC1D10CQ8IV04 446 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 ZNF384Q8TF68 577 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 TAF6LQ9Y6J9 622 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 USP17L3A6NCW0 530 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 USP17L4A6NCW7 530 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 SH2B2O14492 632 aaPredicted RBP7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 RIMBP2O15034 1052 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 PRKAB2O43741 272 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 STX6O43752 255 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 CAPN15O75808 1086 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 CALM1P0DP23 149 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 CALM2P0DP24 149 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 CALM3P0DP25 149 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 GJB2P29033 226 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 CHRNA5P30532 468 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 MCCD1P59942 119 aaPredicted RBP7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 DYNLL1P63167 89 aaKnown RBP7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 PPP4R3BQ5MIZ7 849 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 CTR9Q6PD62 1173 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 USP17L1Q7RTZ2 530 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 SMARCC2Q8TAQ2 1214 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 UBXN4Q92575 508 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 NBPF3Q9H094 633 aa7.79□□□□□ -1.16
FNDC3B-212ENST00000494000 NAV1Q8NEY1 1877 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 PSME4Q14997 1843 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 CCDC69A6NI79 296 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 MINDY4BA8MYZ0 360 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 PDIA3P30101 505 aaKnown RBP7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 BTDP43251 543 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 SDR42E1Q8WUS8 393 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 TEKT1Q969V4 418 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 UBAC1Q9BSL1 405 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 FOCADQ5VW36 1801 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 EP400Q96L91 3159 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 B4E1Z4 1266 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 IFIT3O14879 490 aaKnown RBP7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 ECE2O60344 883 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 ZSCAN22P10073 491 aaPredicted RBP7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 WTAPQ15007 396 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 TCEAL1Q15170 157 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 TMEM67Q5HYA8 995 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 C12orf60Q5U649 245 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 TEX11Q8IYF3 940 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 FAM184AQ8NB25 1140 aa7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 DHX38Q92620 1227 aaKnown RBP7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 UPF1Q92900 1129 aaKnown RBP eCLIP7.78□□□□□ -1.16
FNDC3B-212ENST00000494000 KLF18A0A0U1RQI7 1052 aa7.77□□□□□ -1.17
FNDC3B-212ENST00000494000 USP17L12C9JPN9 530 aa7.77□□□□□ -1.17
FNDC3B-212ENST00000494000 USP17L21D6R901 530 aa7.77□□□□□ -1.17
FNDC3B-212ENST00000494000 BAG4O95429 457 aaKnown RBP7.77□□□□□ -1.17
FNDC3B-212ENST00000494000 LARGE1O95461 756 aa7.77□□□□□ -1.17
FNDC3B-212ENST00000494000 DPEP1P16444 411 aa7.77□□□□□ -1.17
FNDC3B-212ENST00000494000 SCNN1AP37088 669 aa7.77□□□□□ -1.17
FNDC3B-212ENST00000494000 ANTXR2P58335 489 aa7.77□□□□□ -1.17
FNDC3B-212ENST00000494000 APOBRQ0VD83 1088 aa7.77□□□□□ -1.17
FNDC3B-212ENST00000494000 GSE1Q14687 1217 aa7.77□□□□□ -1.17
FNDC3B-212ENST00000494000 C4orf46Q504U0 113 aa7.77□□□□□ -1.17
FNDC3B-212ENST00000494000 DALRD3Q5D0E6 543 aaKnown RBP7.77□□□□□ -1.17
FNDC3B-212ENST00000494000 LARP1BQ659C4 914 aaKnown RBP7.77□□□□□ -1.17
FNDC3B-212ENST00000494000 TTC6Q86TZ1 520 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms